prot_A-nodosum_M_contig88.42.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig88.42.1
Unique Nameprot_A-nodosum_M_contig88.42.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length272
Homology
BLAST of mRNA_A-nodosum_M_contig88.42.1 vs. uniprot
Match: A0A6H5KSE2_9PHAE (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSE2_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 8.480e-98
Identity = 139/207 (67.15%), Postives = 161/207 (77.78%), Query Frame = 0
Query:    1 GARRSSWPGFRRPVHRDHVILREESGPLRRTEVLCARSGAHLGHVFDDGPPPTGERFCINRSALVMIPRGVPLPRESRPLRRPA----EDLARLGSLGEALRGIQLEAATFAGGCFWHVRDDFLAVPGVYEALCGFYGRVEAVRVVFDPVVTSYLSLARRFFGMHDPTTGDRQGNDWGPQYQAALFPHTDSQARAAEEALAWAREEL 203
            G R ++WPGF RPVH +HV+ REE+GPLRRTEVLCARSGAHLGH+FDDGPPP G+RFCINRSAL  +P   PLPRE RP+ RPA    E L      G  LRG++LE ATF GGCFWHVRDDFLAVPGV+E  CG+ GR+EAVRV FDP V  Y  L R FF  HDP+TGDRQGNDWGPQYQAA+FPH +SQ  +A+ A+AWA++ L
Sbjct:  295 GRRDNAWPGFSRPVHPEHVVFREENGPLRRTEVLCARSGAHLGHLFDDGPPPNGKRFCINRSALTFVPMDSPLPREYRPIHRPAASALEGLGTGTGFGAVLRGLELEVATFGGGCFWHVRDDFLAVPGVHEVSCGYCGRIEAVRVAFDPAVVPYSDLVRCFFDFHDPSTGDRQGNDWGPQYQAAIFPHDESQKCSADRAIAWAQDLL 501          
BLAST of mRNA_A-nodosum_M_contig88.42.1 vs. uniprot
Match: A0A7Y4SWI2_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4SWI2_9BACT)

HSP 1 Score: 185 bits (470), Expect = 3.240e-53
Identity = 102/211 (48.34%), Postives = 124/211 (58.77%), Query Frame = 0
Query:    5 SSWPGFRRPVHRDHVILREESGP-LRRTEVLCARSGAHLGHVFDDGPPPTGERFCINRSALVMIPRGVPLPRESRPLRRPAEDLARLGSLGEALRGIQLEAATFAGGCFWHVRDDFLAVPGV----------------YEALC-GFYGRVEAVRVVFDPVVTSYLSLARRFFGMHDPTTGDRQGNDWGPQYQAALFPHTDSQARAAEEALA 197
            S WP F RP+  +HV+LR +    +RR EVL ARSGAHLGHVFDDGP PTG+RFCIN +AL+ +P G PLPRESRP                       E A FAGGCFW V D F  +PGV                Y+A+C G  G  EAV+VVFDP+  SY  L + FF  HD TT DRQG D G QY++A+F  T +Q  AA++ +A
Sbjct:  114 SGWPSFTRPLDPEHVLLRTDGAHGMRRIEVLDARSGAHLGHVFDDGPAPTGKRFCINGAALLFVPEGEPLPRESRPA--------------------VTENAYFAGGCFWGVEDVFQQIPGVLDAESGYMGGAPEQPSYKAVCSGTTGHAEAVKVVFDPLRVSYDELLKYFFANHDATTLDRQGPDHGTQYRSAVFADTPAQLAAAQKFVA 304          
BLAST of mRNA_A-nodosum_M_contig88.42.1 vs. uniprot
Match: A0A3M2CSA8_9BACT (Multifunctional fusion protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CSA8_9BACT)

HSP 1 Score: 168 bits (425), Expect = 6.480e-47
Identity = 90/211 (42.65%), Postives = 113/211 (53.55%), Query Frame = 0
Query:    5 SSWPGFRRPVHRDHVILREESG-PLRRTEVLCARSGAHLGHVFDDGPPPTGERFCINRSALVMIPRGVPLPRESRPLRRPAEDLARLGSLGEALRGIQLEAATFAGGCFWHVRDDFLAVPGVYEALCGFYG-----------------RVEAVRVVFDPVVTSYLSLARRFFGMHDPTTGDRQGNDWGPQYQAALFPHTDSQARAAEEALA 197
            + WP F +PV  DHV  RE+    + RTE+LCAR GAHLGHVFDDGP PTG RFC+N  +L  I +G  +P  SRP                    +  + A FAGGCFW + D F   PGV +A+ G+ G                   E+VRV +DP   +Y  L  RFF MHDPT  +RQG D G QY++A+F   D Q R AE  +A
Sbjct:   81 TGWPSFFQPVDPDHVATREDRAYGMVRTEILCARCGAHLGHVFDDGPRPTGLRFCLNSVSLDFIEQGADIPARSRP--------------------VPAQTAYFAGGCFWGIEDRFQHTPGVIDAVSGYQGGRVPNPTYRQVCFENTGHAESVRVTYDPARVTYRDLLERFFEMHDPTQLNRQGPDVGDQYRSAIFVVGDEQRRQAEAYIA 271          
BLAST of mRNA_A-nodosum_M_contig88.42.1 vs. uniprot
Match: A0A522M4C9_9BACT (Multifunctional fusion protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A522M4C9_9BACT)

HSP 1 Score: 167 bits (423), Expect = 1.790e-46
Identity = 91/211 (43.13%), Postives = 114/211 (54.03%), Query Frame = 0
Query:    5 SSWPGFRRPVHRDHVILR-EESGPLRRTEVLCARSGAHLGHVFDDGPPPTGERFCINRSALVMIPRGVPLPRESRPLRRPAEDLARLGSLGEALRGIQLEAATFAGGCFWHVRDDFLAVPGVYEALCGFY-----------------GRVEAVRVVFDPVVTSYLSLARRFFGMHDPTTGDRQGNDWGPQYQAALFPHTDSQARAAEEALA 197
            + WP F RPV  +H++ + + S  + RTEVLCAR GAHLGHVFDDGP PTGER+C+N +AL    +G  LP  S P R         G  G+       E A FAGGCFW V   F   PGV +A+ G+                  G  E V+V+FDP   +Y  L   FF MHDPT  DRQG D G QY++ ++   D Q R AE  +A
Sbjct:   77 TGWPSFYRPVDPEHIVRKVDTSYGMVRTEVLCARCGAHLGHVFDDGPKPTGERYCLNSAALKFYEKGAQLPSGSLPARSAGAPATAAGRKGDP------EVAYFAGGCFWGVEHYFHRGPGVIDAISGYMQGHVDHPTYRQVCTGTTGHAETVKVIFDPGKITYRRLLEAFFTMHDPTQLDRQGPDSGNQYRSGIWYVNDEQKREAEAYIA 281          
BLAST of mRNA_A-nodosum_M_contig88.42.1 vs. uniprot
Match: A0A7Y8IN52_9BACT (Multifunctional fusion protein n=1 Tax=Thermoanaerobaculaceae bacterium TaxID=2699758 RepID=A0A7Y8IN52_9BACT)

HSP 1 Score: 166 bits (420), Expect = 2.640e-46
Identity = 91/210 (43.33%), Postives = 113/210 (53.81%), Query Frame = 0
Query:    5 SSWPGFRRPVHRDHVILREE-SGPLRRTEVLCARSGAHLGHVFDDGPPPTGERFCINRSALVMIPRGVPLPRESRPLRRPAEDLARLGSLGEALRGIQLEAATFAGGCFWHVRDDFLAVPGVYEALCGFY-----------------GRVEAVRVVFDPVVTSYLSLARRFFGMHDPTTGDRQGNDWGPQYQAALFPHTDSQARAAEEAL 196
            + WP F +PV   HV  + + S  + R+E++CAR GAHLGHVFDDGPPPTG R+C+N +ALV    G  LP ESRPL                    QL  A FAGGCFW V   F  +PGV +A  G+                  G  E V+V FDP   SY  L R FF +HDPTT DRQG D G QY++A+F   + Q + AE  +
Sbjct:   58 TGWPSFFQPVDAAHVREQPDYSLGMVRSEIVCARCGAHLGHVFDDGPPPTGRRYCLNSAALVFFEAGATLPPESRPL--------------------QLATAYFAGGCFWGVEYAFSLLPGVVDATSGYQNGRSERPTYREVCSGETGHAETVQVRFDPATVSYEQLVRFFFAIHDPTTLDRQGPDVGSQYRSAIFFVDEGQRQVAERVI 247          
BLAST of mRNA_A-nodosum_M_contig88.42.1 vs. uniprot
Match: A0A7V6DF57_9BACT (Multifunctional fusion protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V6DF57_9BACT)

HSP 1 Score: 167 bits (422), Expect = 2.790e-46
Identity = 92/210 (43.81%), Postives = 112/210 (53.33%), Query Frame = 0
Query:    5 SSWPGFRRPVHRDHVILREE-SGPLRRTEVLCARSGAHLGHVFDDGPPPTGERFCINRSALVMIPRGVPLPRESRPLRRPAEDLARLGSLGEALRGIQLEAATFAGGCFWHVRDDFLAVPGVYEALCGFY-----------------GRVEAVRVVFDPVVTSYLSLARRFFGMHDPTTGDRQGNDWGPQYQAALFPHTDSQARAAEEAL 196
            + WP F RP    HV+ R + S  + RTE+LCAR GAHLGHVFDDGP PTG R+C+N +AL     G  LP  SRPL                     LE A FAGGCFW V   F   PGV +A+ G+                  G  E V+VVFDP   SY  L R FF +HDPTT +RQG D G QY++A+F   D+Q + AE  +
Sbjct:   88 TGWPSFFRPFDEAHVVERRDLSLGMVRTEILCARCGAHLGHVFDDGPRPTGLRYCLNSAALTFYEEGTELPAASRPL--------------------PLETAYFAGGCFWGVEHAFSLFPGVVDAVSGYQNGHTANPSYREVCSDTTGHAETVKVVFDPARVSYERLVRFFFLIHDPTTLNRQGPDVGSQYRSAIFVVNDAQRQVAERVI 277          
BLAST of mRNA_A-nodosum_M_contig88.42.1 vs. uniprot
Match: A0A7C5WIQ9_9BACT (Multifunctional fusion protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C5WIQ9_9BACT)

HSP 1 Score: 163 bits (413), Expect = 6.210e-45
Identity = 90/211 (42.65%), Postives = 110/211 (52.13%), Query Frame = 0
Query:    5 SSWPGFRRPVHRDHVI-LREESGPLRRTEVLCARSGAHLGHVFDDGPPPTGERFCINRSALVMIPRGVPLPRESRPLRRPAEDLARLGSLGEALRGIQLEAATFAGGCFWHVRDDFLAVPGVYEALCGFYG-----------------RVEAVRVVFDPVVTSYLSLARRFFGMHDPTTGDRQGNDWGPQYQAALFPHTDSQARAAEEALA 197
            + WP F RP   DHV  + + S  ++R E+ CAR G HLGHVF DGP PTG R+C+N ++L    +G  LP  SRP                    I  E A FAGGCFW V D F  V GV +A+ G+ G                   E+VRVVFDP   +Y  L  +FF  HDPT  +RQG D G QY++ALFP  D Q R AE  LA
Sbjct:  100 TGWPSFYRPFDPDHVRNIEDNSFGMKRVEIRCARCGGHLGHVFPDGPEPTGLRYCLNSASLEFFEKGEALPERSRP--------------------IPTETAYFAGGCFWGVEDRFQHVEGVIDAVSGYQGGHVENPTYRQVCTDKTGHAESVRVVFDPSRVTYRGLLEKFFEFHDPTQLNRQGPDRGTQYRSALFPVDDEQRRMAEAFLA 290          
BLAST of mRNA_A-nodosum_M_contig88.42.1 vs. uniprot
Match: A0A3M1R2X0_9BACT (Multifunctional fusion protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1R2X0_9BACT)

HSP 1 Score: 162 bits (409), Expect = 1.520e-44
Identity = 89/211 (42.18%), Postives = 113/211 (53.55%), Query Frame = 0
Query:    5 SSWPGFRRPVHRDHVILR-EESGPLRRTEVLCARSGAHLGHVFDDGPPPTGERFCINRSALVMIPRGVPLPRESRPLRRPAEDLARLGSLGEALRGIQLEAATFAGGCFWHVRDDFLAVPGVYEALCGFY-----------------GRVEAVRVVFDPVVTSYLSLARRFFGMHDPTTGDRQGNDWGPQYQAALFPHTDSQARAAEEALA 197
            + WP F R    +HV  + ++S  + RTE+LCAR GAHLGHVF+DGPPPTGER C+N +AL    +G PLP ESRP                     QLE A FAGGCFW V   F   PGV +A+ G+                  G  E V+VVFDP   +Y  L   FF MHDPT  +RQG D G QY++ ++  +  Q + AE  +A
Sbjct:   76 TGWPSFYREFDPEHVARKVDKSHGMVRTEILCARCGAHLGHVFEDGPPPTGERHCLNSAALRFYEKGAPLPPESRPA--------------------QLETAYFAGGCFWGVEHYFQKGPGVIDAVSGYMQGDVENPTYKQVCYENTGHAETVKVVFDPQRITYRQLLEAFFKMHDPTQLNRQGPDVGEQYRSGIWYTSPEQKKEAEAYIA 266          
BLAST of mRNA_A-nodosum_M_contig88.42.1 vs. uniprot
Match: A0A7V1DQF2_9BACT (Multifunctional fusion protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V1DQF2_9BACT)

HSP 1 Score: 160 bits (405), Expect = 6.590e-44
Identity = 91/215 (42.33%), Postives = 113/215 (52.56%), Query Frame = 0
Query:    5 SSWPGFRRPVHRDHVILREE-SGPLRRTEVLCARSGAHLGHVFDDGPPPTGERFCINRSALVMIPRGVPLPRESRPLRRPAEDLARLGSLGEALRGIQLEAATFAGGCFWHVRDDFLAVPGVYEALCGFY-----------------GRVEAVRVVFDPVVTSYLSLARRFFGMHDPTTGDRQGNDWGPQYQAALFPHTDSQARAAEEALAWARE 201
            + WP F R   RDHV  + + S  + RTE+ CAR GAHLGHVF DGPPPTGER C+N +AL  +P G PLP ES+P                    +  E A FAGGCFW +   F   PGV +A+ G+                  G  E V+VV+DP   SY  L   FF MHDPT   RQG D G QY++ ++   + Q R   EALA+ RE
Sbjct:   81 TGWPSFFREFDRDHVARQLDLSHGMVRTEIRCARCGAHLGHVFPDGPPPTGERHCLNSAALKFVPDGQPLPPESQP--------------------VHPEVAYFAGGCFWGIEHYFQQGPGVIDAVSGYMQGHVEHPTYEQVCSGTTGHAETVKVVYDPKRISYRRLLEAFFAMHDPTQWMRQGPDVGEQYRSGIWYVNEEQRR---EALAFIRE 272          
BLAST of mRNA_A-nodosum_M_contig88.42.1 vs. uniprot
Match: A0A847I2Y0_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A847I2Y0_9BACT)

HSP 1 Score: 161 bits (407), Expect = 7.590e-44
Identity = 90/210 (42.86%), Postives = 110/210 (52.38%), Query Frame = 0
Query:    5 SSWPGFRRPVHRDHVILR-EESGPLRRTEVLCARSGAHLGHVFDDGPPPTGERFCINRSALVMIPRGVPLPRESRPLRRPAEDLARLG---SLGEALRGIQLEAATFAGGCFWHVRDDFLAVPGVYEALCGFY-----------------GRVEAVRVVFDPVVTSYLSLARRFFGMHDPTTGDRQGNDWGPQYQAALFPHTDSQARAAE 193
            + WP F R     HV  + + S  + RTE+ CAR GAHLGHVFDDGPPPTGER C+N ++L    RG  LP ESRP  R            S G     +  E A FAGGCFW +   F   PGV EA+ G+                  G  E+V+VVFDP   +Y  L   FF MHDPT  DRQG D G QY++ ++   + Q R AE
Sbjct:   77 TGWPSFYREFDPQHVSRKTDRSAGMVRTEINCARCGAHLGHVFDDGPPPTGERHCLNSASLKFYTRGEALPPESRPAARXXXXXXXXXXXQSAGAPGTDVSSETAYFAGGCFWGIEHYFQQGPGVIEAVSGYMQGHVERPTYKQVCSGRTGHAESVKVVFDPRRITYRRLLEAFFKMHDPTELDRQGPDVGSQYRSGIWYANEQQRREAE 286          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig88.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSE2_9PHAE8.480e-9867.15Peptide-methionine (S)-S-oxide reductase n=1 Tax=E... [more]
A0A7Y4SWI2_9BACT3.240e-5348.34Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A3M2CSA8_9BACT6.480e-4742.65Multifunctional fusion protein n=1 Tax=Planctomyce... [more]
A0A522M4C9_9BACT1.790e-4643.13Multifunctional fusion protein n=1 Tax=Acidobacter... [more]
A0A7Y8IN52_9BACT2.640e-4643.33Multifunctional fusion protein n=1 Tax=Thermoanaer... [more]
A0A7V6DF57_9BACT2.790e-4643.81Multifunctional fusion protein n=1 Tax=Acidobacter... [more]
A0A7C5WIQ9_9BACT6.210e-4542.65Multifunctional fusion protein n=1 Tax=Phycisphaer... [more]
A0A3M1R2X0_9BACT1.520e-4442.18Multifunctional fusion protein n=1 Tax=Planctomyce... [more]
A0A7V1DQF2_9BACT6.590e-4442.33Multifunctional fusion protein n=1 Tax=bacterium T... [more]
A0A847I2Y0_9BACT7.590e-4442.86Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002579Peptide methionine sulphoxide reductase MrsB domainPFAMPF01641SelRcoord: 5..66
e-value: 3.0E-16
score: 59.5
IPR002579Peptide methionine sulphoxide reductase MrsB domainPROSITEPS51790MSRBcoord: 1..69
score: 29.08786
NoneNo IPR availableGENE3D2.170.150.20Peptide methionine sulfoxide reductase.coord: 2..77
e-value: 2.5E-20
score: 74.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..272
NoneNo IPR availablePANTHERPTHR42799MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 134..203
NoneNo IPR availablePANTHERPTHR42799MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 101..134
NoneNo IPR availablePANTHERPTHR42799:SF2MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 134..203
NoneNo IPR availablePANTHERPTHR42799:SF2MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 101..134
IPR002569Peptide methionine sulphoxide reductase MsrA domainPFAMPF01625PMSRcoord: 134..201
e-value: 4.0E-17
score: 62.8
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilyGENE3D3.30.1060.10Peptide methionine sulphoxide reductase MsrAcoord: 135..211
e-value: 7.0E-18
score: 66.9
coord: 78..134
e-value: 1.6E-6
score: 29.8
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilySUPERFAMILY55068Peptide methionine sulfoxide reductasecoord: 101..202
IPR011057Mss4-like superfamilySUPERFAMILY51316Mss4-likecoord: 5..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig88contigA-nodosum_M_contig88:380300..390845 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig88.42.1mRNA_A-nodosum_M_contig88.42.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig88 380300..390846 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig88.42.1 ID=prot_A-nodosum_M_contig88.42.1|Name=mRNA_A-nodosum_M_contig88.42.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=272bp
GARRSSWPGFRRPVHRDHVILREESGPLRRTEVLCARSGAHLGHVFDDGP
PPTGERFCINRSALVMIPRGVPLPRESRPLRRPAEDLARLGSLGEALRGI
QLEAATFAGGCFWHVRDDFLAVPGVYEALCGFYGRVEAVRVVFDPVVTSY
LSLARRFFGMHDPTTGDRQGNDWGPQYQAALFPHTDSQARAAEEALAWAR
EELCALRRGVDARLPREPLDADDPAMAAAAASASRARPPFITAGDDSSSG
SGGESGIDELIVEPTREVAENT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002579Met_Sox_Rdtase_MsrB_dom
IPR002569Met_Sox_Rdtase_MsrA_dom
IPR036509Met_Sox_Rdtase_MsrA_sf
IPR011057Mss4-like_sf