prot_A-nodosum_M_contig879.13.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig879.13.1
Unique Nameprot_A-nodosum_M_contig879.13.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length397
Homology
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BLAST of mRNA_A-nodosum_M_contig879.13.1 vs. uniprot
Match: D8LHS3_ECTSI (Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS3_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 6.290e-52
Identity = 105/209 (50.24%), Postives = 121/209 (57.89%), Query Frame = 0 
Query:  189 LDLVYAVMPEIQERLRNATGKEGFGAGYEDVPLGFYRDSNLKPMNWRDAVVSMKPGSGTKGLDETHESRATWEHRGRGEGGASVLLKEVVEEVLDEWEESVGDRLLEDRFPAIYPEISPEISGTDARRSYRRELGNTASVRVGTRYGGPPPGEHGPWRWGQLEPGSPLEKELRAEIASYPRRLPRRLRRYYQGKVAWVTGADRGLGERV 397
            LD  YA+MP IQE L   TG EG G GYED P+GFYRD+NLKP+NWRDA+VSMKPGSGT GLD   +                                                    + SG+  +   RRE G    V  GTRY GPPPG HGPWRWGQL  GS LE++L+AEIAS+PRRLPRR+RRYY  KVAWVTGAD GLGE++
Sbjct:  165 LDDAYAMMPHIQESLMEKTGWEGTGTGYEDTPVGFYRDTNLKPLNWRDAMVSMKPGSGTLGLDPHFD----------------------------------------------------DTSGSPEQVERRRERGLLKGV--GTRYRGPPPGTHGPWRWGQLVKGSALEEKLKAEIASFPRRLPRRVRRYYHDKVAWVTGADHGLGEQM 319
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BLAST of mRNA_A-nodosum_M_contig879.13.1 vs. uniprot
Match: A0A6H5JSY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY9_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 1.070e-33
Identity = 86/209 (41.15%), Postives = 97/209 (46.41%), Query Frame = 0 
Query:  189 LDLVYAVMPEIQERLRNATGKEGFGAGYEDVPLGFYRDSNLKPMNWRDAVVSMKPGSGTKGLDETHESRATWEHRGRGEGGASVLLKEVVEEVLDEWEESVGDRLLEDRFPAIYPEISPEISGTDARRSYRRELGNTASVRVGTRYGGPPPGEHGPWRWGQLEPGSPLEKELRAEIASYPRRLPRRLRRYYQGKVAWVTGADRGLGERV 397
            LD VYA+MP IQE L   TG EG G GYED P+GFYRD+NLKP+NWRDA+VSMKPGSGT GLD   +                                                      SG+  +   RRE G    V  GTRY GPPPG HGPWRWGQL  GS LE+                        V WVTGAD G GE++
Sbjct:  125 LDDVYAMMPHIQESLMEKTGWEGIGTGYEDTPVGFYRDTNLKPLNWRDAMVSMKPGSGTLGLDPDFDDN----------------------------------------------------SGSPEQVERRRERGLLKGV--GTRYRGPPPGTHGPWRWGQLVKGSALEE------------------------VVWVTGADHGFGEQM 255
[Close]
BLAST of mRNA_A-nodosum_M_contig879.13.1 vs. uniprot
Match: D7FJU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU3_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 3.990e-33
Identity = 77/175 (44.00%), Postives = 87/175 (49.71%), Query Frame = 0 
Query:  189 LDLVYAVMPEIQERLRNATGKEGFGAGYEDVPLGFYRDSNLKPMNWRDAVVSMKPGSGTKGLDETHESRATWEHRGRGEGGASVLLKEVVEEVLDEWEESVGDRLLEDRFPAIYPEISPEISGTDARRSYRRELGNTASVRVGTRYGGPPPGEHGPWRWGQLEPGSPLEKELRAE 363
            LD  YA+MP IQE L   TG EG G GYED P+GFYRD+NLKP+NWRDA+VSMKPGSGT GLD   +                                                    + SG+  +   RRE G    V  GTRY GPPPG HGPWRWGQL  GS LE+  R E
Sbjct:   33 LDDAYAMMPHIQESLMEKTGWEGTGTGYEDTPVGFYRDTNLKPLNWRDAMVSMKPGSGTLGLDPHFD----------------------------------------------------DTSGSPEQVERRRERGLLKGV--GTRYRGPPPGTHGPWRWGQLVKGSALEEGFRLE 153
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig879.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHS3_ECTSI6.290e-5250.24Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JSY9_9PHAE1.070e-3341.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJU3_ECTSI3.990e-3344.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig879contigA-nodosum_M_contig879:197840..202846 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig879.13.1mRNA_A-nodosum_M_contig879.13.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig879 197840..202847 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig879.13.1 ID=prot_A-nodosum_M_contig879.13.1|Name=mRNA_A-nodosum_M_contig879.13.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=397bp
TVQSARRKLYSPRRSHPAVSEFCTPHLRYFGYSWSMPSRRRNISPFKLFS
LLLAVAHEPKPASTQRSQQSCFLSLLSPVGPRLEGRGFSGWRRGVDVEVS
QRASMIFPARQSCLVGSPLAGRCGISSAPRTRAQAGGGGGYGEIKGSRGT
DGVEGTDAEEGSTELDAMWSRAAIGAREAEALRDITHTLDLVYAVMPEIQ
ERLRNATGKEGFGAGYEDVPLGFYRDSNLKPMNWRDAVVSMKPGSGTKGL
DETHESRATWEHRGRGEGGASVLLKEVVEEVLDEWEESVGDRLLEDRFPA
IYPEISPEISGTDARRSYRRELGNTASVRVGTRYGGPPPGEHGPWRWGQL
EPGSPLEKELRAEIASYPRRLPRRLRRYYQGKVAWVTGADRGLGERV
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