prot_A-nodosum_M_contig877.2.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig877.2.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 2.610e-14 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 0
Query: 4 WHRQLWHLHSKILD-VVKLDNNERSFEDTVSDCNVCGVGKSRQLAHPKIAHHK-VNHPFQLLFVDLMGSITPEALGGYKYVSKVSDKFPKRTEIHLLKPKADALSS 107
WH++L H + ++L+ + ++D + D+ S C C + KS Q HPKIA+ + QL+ DL+G I+P A+GGY Y++K +D + ++ + K DALSS
Sbjct: 240 WHQRLGHPNVQVLEQLARIDGSGVHLRDSFSACGTCKINKSSQQNHPKIANMDGITERLQLVSTDLLGPISPSAIGGYNYMAKFTDHATRLKAVYFIAKKGDALSS 345
BLAST of mRNA_A-nodosum_M_contig877.2.1 vs. uniprot
Match: A0A6H5JWF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF9_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 4.590e-9 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query: 7 QLWHLHSKILDVV-KLDNNERSFEDTVSDCNVCGVGKSRQLAHPKIAHHKVNHPFQLLFVDLMGSITPEALGGYKYVSKV 85
+L +++S+ L ++ K+DNN + T+ C VGKS Q H K A + V+ FQL+ DLMG I+P ALGG++YVSK+
Sbjct: 251 RLGYINSRSLGMLRKIDNNGVDYTGTMEACGN-DVGKSSQRPHLKKATYDVSRSFQLISTDLMGPISPPALGGFRYVSKL 329
BLAST of mRNA_A-nodosum_M_contig877.2.1 vs. uniprot
Match: UPI0002C2FD19 (uncharacterized protein LOC101310001 n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C2FD19) HSP 1 Score: 58.9 bits (141), Expect = 7.990e-8 Identity = 33/112 (29.46%), Postives = 58/112 (51.79%), Query Frame = 0
Query: 3 LWHRQLWHLHSKILDVVKLDNNE------RSFEDTVSDCNVCGVGKSRQLAHPKIAHHKVNHPFQLLFVDLMGSITPEALGGYKYVSKVSDKFPKRTEIHLLKPKADALSSF 108
LWHR++ HL+ + D+VKL + ++ C C +GK + +HP ++ + QL+++DL+G I E++GG KYV + D F + T + L K + +
Sbjct: 741 LWHRRMCHLNHQ--DIVKLSAKSGVRGLPKLTGKSIGMCWDCKMGKLTRTSHPSLSAKPTSKVLQLVYLDLVGPIDTESVGGRKYVLVIVDDFSRFTWVKFLTSKDENFEKY 850
BLAST of mRNA_A-nodosum_M_contig877.2.1 vs. uniprot
Match: A0A2Z7BSS5_9LAMI (Integrase catalytic domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BSS5_9LAMI) HSP 1 Score: 58.2 bits (139), Expect = 1.430e-7 Identity = 33/110 (30.00%), Postives = 59/110 (53.64%), Query Frame = 0
Query: 3 LWHRQLWHLH----SKILDVVKLDNNERSFEDTVSDCNVCGVGKSRQLAHPKIAHHKVNHPFQLLFVDLMGSITPEALGGYKYVSKVSDKFPKRTEIHLLKPKADALSSF 108
LWH ++ H S + D++ D+N V C+VC + K ++L K + V+HPF+LL +D+ G + ++ GY++ + D + T ++LL+ K+D S F
Sbjct: 450 LWHLRMGHPSPSKLSSLKDILHFDSNNVD----VHPCHVCHLSKQKRLPF-KSNNKMVDHPFELLHIDVWGPFSQYSVDGYRFFLTIVDDHTRFTWVYLLRSKSDVSSIF 554
BLAST of mRNA_A-nodosum_M_contig877.2.1 vs. uniprot
Match: A0A438I5H1_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438I5H1_VITVI) HSP 1 Score: 53.9 bits (128), Expect = 4.470e-6 Identity = 36/112 (32.14%), Postives = 56/112 (50.00%), Query Frame = 0
Query: 3 LWHRQLWHLHSKILDVVKLDN--NERSFEDTVSDCNVCGVGKSRQLAHPKIAHHKVNH---PFQLLFVDLMGSITPEALGGYKYVSKVSDKFPKRTEIHLLKPKADALSSFQ 109
LWH++L H+ + L+ + D+ + F D C VC GK K K++ L+ D+ GS+TP ALGGYKY D F + + L+ K+D+L+ F+
Sbjct: 343 LWHKRLGHISRQRLERLVKDSVLSNLDFSD-FETCVVCLKGKMTA----KTRKEKIDRCASTLDLIHTDICGSLTPTALGGYKYFITFIDDFSRFGYVELIHEKSDSLNVFK 449 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig877.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig877.2.1 ID=prot_A-nodosum_M_contig877.2.1|Name=mRNA_A-nodosum_M_contig877.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=109bpback to top |