prot_A-nodosum_M_contig877.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig877.1.1
Unique Nameprot_A-nodosum_M_contig877.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length465
Homology
BLAST of mRNA_A-nodosum_M_contig877.1.1 vs. uniprot
Match: D7FY49_ECTSI (Similar to collagen, partial n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY49_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 1.540e-56
Identity = 146/337 (43.32%), Postives = 201/337 (59.64%), Query Frame = 0
Query:   89 FSVLATMLLGHLNLAFAQDSDTGVSCVQVSSSKFSTPCPCGLTSS-SFSVVGETSVAKLRVNLAVVLDGSDSVGSANFLVQREFAKNIIAAFAERNLFANGGTASYVQYSSFVDASDTGTFFSLKDFNNFVDNNQFNGGGTDDIDGGITAARYLLNAAPPASVAIMIVLTVGINIIIGTAADDSRADGITLYALGIGVSVSVGVLLPIAGNIGSVLGAVLLAIAGSEDNVFSVDDFEGLQAVVSVILGVVGTSTVACPATNAVLIVEY-GATVDSVVSDPDATLSNNIVAFFVSDLEDNPTTFTVILDTCGATEPVDPVVSITYSDNQGNSPDFTEL 423
            FS+LAT   G L+L   +      SCVQV+   ++  CPC   S  SF++ G+T+V    VN+AV++D S SVG+A++ + +EFAKN +A+FAE+NLF NGG+AS+ Q++S  DAS+ GTF+SL+DFN FVD +  + GGTD IDG I   R LL+A+P A+ + MIV T G        AD +RA+G  LYA+G+G         P   N        LLAI G E NVF VD+FE L   +  I+   G S V C AT A + V++ G   ++ V    AT     V F V DLE  PT F V LD CG  E  + + S++Y+D++GN+PD + L
Sbjct:   17 FSLLAT---GALSLFLGRGVYGQESCVQVADPTWAANCPCEAGSQYSFTMEGQTTVTANTVNVAVIIDASGSVGTADWELSKEFAKNTVASFAEQNLFTNGGSASFAQFAS--DASEGGTFYSLEDFNAFVDADVKHSGGTDIIDG-IAKGRELLSASPAAT-SFMIVTTDGAAPDPQDEADAARAEGTILYAVGVGSG-------PSQEN--------LLAIGGDEANVFDVDNFEELDLALDDIVSTSGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSAL 330          
BLAST of mRNA_A-nodosum_M_contig877.1.1 vs. uniprot
Match: A0A6H5JRK3_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK3_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 5.730e-51
Identity = 141/328 (42.99%), Postives = 191/328 (58.23%), Query Frame = 0
Query:   98 GHLNLAFAQDSDTGVSCVQVSSSKFSTPCPCGLTSS-SFSVVGETSVAKLRVNLAVVLDGSDSVGSANFLVQREFAKNIIAAFAERNLFANGGTASYVQYSSFVDASDTGTFFSLKDFNNFVDNNQFNGGGTDDIDGGITAARYLLNAAPPASVAIMIVLTVGINIIIGTAADDSRADGITLYALGIGVSVSVGVLLPIAGNIGSVLGAVLLAIAGSEDNVFSVDDFEGLQAVVSVILGVVGTSTVACPATNAVLIVEY-GATVDSVVSDPDATLSNNIVAFFVSDLEDNPTTFTVILDTCGATEPVDPVVSITYSDNQGNSPDFTEL 423
            G L+L          SCVQV+   + T CPC   S  SF++ G+T+V    VN+AV++D S SV +A++ + +EFAKN +A+FAE+NLF NGG+AS+ Q+SS   AS+ GTF+SL+DFN FVD +    GGTD IDG I   R LL+A+P A+ + MIV T G        AD +RA+G  LYA+G+G         P   N        LLAI G E NVF VD+FE L   +  I+   G S V C AT A + V++ G   ++ V    AT     V F V DLE  PT F V LD CG  E  + + S++Y+D++GN+PD + L
Sbjct:   40 GALSLFLGGSVSGQESCVQVAYPTWGTNCPCEAGSQYSFTMEGQTTVTANTVNVAVIIDASGSVSTADWELSKEFAKNTVASFAEQNLFTNGGSASFAQFSS--SASEGGTFYSLEDFNAFVDADAKYSGGTDIIDG-IAKGRELLSASPAAT-SFMIVTTDGAAPDPQDEADAARAEGTILYAVGVGSG-------PSQEN--------LLAIGGDEANVFDVDNFEELDLALEDIVSASGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSAL 347          
BLAST of mRNA_A-nodosum_M_contig877.1.1 vs. uniprot
Match: D7FHN6_ECTSI (Glycin-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN6_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 4.390e-50
Identity = 136/313 (43.45%), Postives = 188/313 (60.06%), Query Frame = 0
Query:  113 SCVQVSSSKFSTPCPCGLTSS-SFSVVGETSVAKLRVNLAVVLDGSDSVGSANFLVQREFAKNIIAAFAERNLFANGGTASYVQYSSFVDASDTGTFFSLKDFNNFVDNNQFNGGGTDDIDGGITAARYLLNAAPPASVAIMIVLTVGINIIIGTAADDSRADGITLYALGIGVSVSVGVLLPIAGNIGSVLGAVLLAIAGSEDNVFSVDDFEGLQAVVSVILGVVGTSTVACPATNAVLIVEY-GATVDSVVSDPDATLSNNIVAFFVSDLEDNPTTFTVILDTCGATEPVDPVVSITYSDNQGNSPDFTEL 423
            SCVQV+   +   CPC   S  SF++ G+T+V    VN+AV++D S SVG+A++ + +EFAKN +A+FA++NLF NGG+AS+ Q+SS  DAS+ GTF+SL+DFN FVD +    GGTD IDG I   R LL+A+P  + + MIV T G+       AD +RA+G  LYA+G+G         P   N        LLAI G E NVF VD+FE L   +  I+   G S V C AT A + V++ G   ++ V    AT     V F + DLE  PT F V LD CG  E  + + S++Y+D++GN+PD + L
Sbjct:   45 SCVQVAYPTWGANCPCEAGSQYSFTMEGQTTVTANTVNVAVIIDASVSVGTADWELSKEFAKNTVASFAQQNLFTNGGSASFAQFSS--DASEGGTFYSLEDFNAFVDADAKYSGGTDIIDG-IAKGRELLSASPTTT-SFMIVTTDGVAPDPQDEADAARAEGTILYAVGVGSG-------PSQEN--------LLAIGGDEANVFDVDNFEELDLALDDIVSASGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTIDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSAL 337          
BLAST of mRNA_A-nodosum_M_contig877.1.1 vs. uniprot
Match: D8LLU2_ECTSI (Similar to integrin alpha Hr1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU2_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 2.640e-44
Identity = 124/314 (39.49%), Postives = 177/314 (56.37%), Query Frame = 0
Query:  113 SCVQVSSSKFSTPCPCGLTSS-SFSVVGETSVAKLRVNLAVVLDGSDSVGSANFLVQREFAKNIIAAFAERNLFANGGTASYVQYSSFVDASDTGTFFSLKDFNNFVDNN-QFNGGGTDDIDGGITAARYLLNAAPPASVAIMIVLTVGINIIIGTAADDSRADGITLYALGIGVSVSVGVLLPIAGNIGSVLGAVLLAIAGSEDNVFSVDDFEGLQAVVSVILGVVGTSTVACPATNAVLIVEY-GATVDSVVSDPDATLSNNIVAFFVSDLEDNPTTFTVILDTCGATEPVDPVVSITYSDNQGNSPDFTEL 423
            SCVQV+S  ++  CPC      SF++ G+T+V    VN+AV++D S SV    + +   FAK+ +++FA++NLF NGG+AS  Q+SS   AS+ GTF+SL+DFN FVD N +++ GGTD IDG I   R LL A+P A+ + MIV T G +      AD +R +G  +YA+G+G   +                 +LL I G E NVF VD F+ L   ++ IL   G+S V C AT A + VE+ G    + V    AT             E  PT F V LD CG  E  + + S++Y+D++GN+PD + L
Sbjct:   24 SCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANTVNVAVIIDSSGSVDDDEWDMSMAFAKDAVSSFADQNLFTNGGSASIAQFSS--SASEGGTFYSLEDFNAFVDGNTKYSSGGTDIIDG-IAKGRELLKASP-ATTSFMIVTTDGQSSSPKAEADAARDEGTIVYAVGVGTGPTQ---------------EILLDIGGEEANVFDVDGFDELDVALAGILSASGSS-VPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSL 317          
BLAST of mRNA_A-nodosum_M_contig877.1.1 vs. uniprot
Match: A0A6H5KCW7_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW7_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 4.640e-43
Identity = 134/330 (40.61%), Postives = 190/330 (57.58%), Query Frame = 0
Query:  108 SDTGVSCVQV--SSSKFSTPCPCGLTSSSFSVVGETSVAKLRVNLAVVLDGSDSVGSANFLVQREFAKNIIAAFAERNLFANGGTASYVQYSSFVDASDTGTFFSLKDFNNFVDNNQFNGGGTDDIDGGITAARYLLNAAPPASVAIMIVLTVGINIII-GTAADDSRADGIT-LYALGIGVSVSVGVLLPIAGNIGSVLGAVLLAIAGSEDNVFSVDDFEGLQAVVSVILGVVGTSTVACPATNAVLIVEYGATVDSVVSDPDATLSNNIVAFFVSDLEDNPTTFTVILDTCGATEPVDPVVSITYSDNQGNSPDFTELLDITSDSTCP 433
            + +  SCVQV  SS+  ++P P    S +F++ G T++    VN+ +V+DGS S+ S++++++++FAK+ +AAFA RN+F NGGTASYVQ+S+     D GTF S + F+  VD+     GG  DI  GI A R LLN  P AS + M+++T G +     TAA ++RAD  T ++A+G+G  +S                  LL IAG E NVFSV +F  L+A V  I  +   + ++CPATN  + VE+   V SVVS  DA ++ N V F   +LE+NPT F V L  CG       V+S+ Y D Q N PD    L I  D TCP
Sbjct:    8 AQSNTSCVQVVDSSAADASPYPEDEPSLTFTMEGATTLRTNIVNVVIVVDGSGSIVSSDWILEQQFAKDTVAAFARRNIFDNGGTASYVQFST--STYDEGTFTSTESFDEHVDS-VIQWGGDTDIADGIIAGRALLNENP-ASFSFMVLITDGESYTDPSTAAQETRADNTTTIFAVGVGSQIST---------------ETLLDIAGEESNVFSVTNFSSLEAAVEDIEVIADQTVLSCPATNVSITVEFDVPVLSVVSS-DAAITGNRVTFAADNLENNPTQFAVGLLDCGL------VISVDYEDEQENVPD----LSILPDPTCP 307          
BLAST of mRNA_A-nodosum_M_contig877.1.1 vs. uniprot
Match: A0A6H5JR61_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR61_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.090e-42
Identity = 118/280 (42.14%), Postives = 165/280 (58.93%), Query Frame = 0
Query:  147 RVNLAVVLDGSDSVGSANFLVQREFAKNIIAAFAERNLFANGGTASYVQYSSFVDASDTGTFFSLKDFNNFVD--NNQFNGGGTDDIDGGITAARYLLNAAPPASVAIMIVLTVGINIIIGTAADDSRADGITLYALGIGVSVSVGVLLPIAGNIGSVLGAVLLAIAGSEDNVFSVDDFEGLQAVVSVILGVVGTSTVACPATNAVLIVEY-GATVDSVVSDPDATLSNNIVAFFVSDLEDNPTTFTVILDTCGATEPVDPVVSITYSDNQGNSPDFTEL 423
            +VN+AV++D S SV +A++ +  EFAKN +A+FAE+NLF NGG+AS+ Q+SS   AS+ GTF+SL+DF+ FVD        GG+ +I  GI   R LL A+P  + + MIV T G        AD +RA+G  +YA+G+G        +P A          LLAI G E NVF VD+FE L  V+  I+   G S V C AT A + V++ G   ++ V    AT   + V F V DLE  PT F V LD CG  E  + + S++Y+D++GN+PD + L
Sbjct:  107 QVNVAVIIDSSGSVSTADWELSMEFAKNTVASFAEQNLFTNGGSASFAQFSS--SASEGGTFYSLEDFDAFVDAETKYATFGGSTNIISGIAKGRELLGASPTTT-SYMIVTTDGEADSPQDEADAARAEGTIMYAVGVGS-------VPTA--------ETLLAIGGDEANVFDVDNFEELDVVLEDIVSASGGS-VPCAATAATVTVQFNGMVTEATVEGGVATYDGSDVIFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSAL 367          
BLAST of mRNA_A-nodosum_M_contig877.1.1 vs. uniprot
Match: D7G513_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G513_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 2.730e-42
Identity = 136/371 (36.66%), Postives = 194/371 (52.29%), Query Frame = 0
Query:   93 ATMLLGHLNLAFAQDSDTGVSCVQVSSSKFSTPCPCGLTSS-SFSVVGETSVAKLRVNLAVVLDGSDSVGSAN--FLVQREFAKNIIAAFAERNLFANGGTASYVQYSSFVDASDTGTFFSLKDFNNFVDNNQFNGGGTDDIDGGITAARYLLNAAPPASVAIMIVLTVGINIIIGTA---ADDSRADGITLYALGIGVSVSVGVLLPIAGNIGSVLGAVLLAIAGSEDNVFSVDDFEGLQAVVSVILGVVGTSTVACPATNAVLIVEYGATVDSVVSDPDATL------SNNIVAFFVSDLEDNPTTFTVILDTCGATEPVDPVVSITYSDNQGNSPDFTELLDITSDSTCPPATSPPTPLESLGAPFEP 451
            + +LLG     F   +    SCVQVS+  F+  CPCG  S  +F + GETSV   +VN+AV++D S S+   +  FL+++EFAKN+ A+FA +NLF NGGTASY  +S    ASD GTF S  +FN FVDN  +  G T+ I+ G++  R LL        + +I++T G     G     AD +R +G  +YA+G+G  VS                A LL+I G   NVF   +F  L   +  I+      ++ C AT+AV+ VE+ A V +       ++        N+V F V +LE  PT+F V+LDTCG TE    V  ++Y D + N PD T +       TC  A +PP P+    +P  P
Sbjct:   11 SNLLLGGALALFLGTTSGQDSCVQVSNVAFAPSCPCGAGSELTFQIEGETSVEANKVNVAVIIDSSGSIFDIDGAFLLEKEFAKNVAASFAAKNLFTNGGTASYASFSDA--ASDGGTFGSEAEFNEFVDNASWIEGDTN-IEAGLSKGRELLANGTSTRTSFLILITDGDWNRGGDPQIEADAARDEGTIVYAVGVGPDVSE---------------ATLLSIGGDLTNVFDASNFTELDNTLDEIVST-SVDSIPCAATDAVISVEFNAMVTAASGGEGGSVPASVSEGGNVVVFEVPNLEATPTSFEVVLDTCGETEGGAIVADVSYVDEEDNEPDLTSIEVAGVVPTCDGAATPP-PVAVTPSPTHP 361          
BLAST of mRNA_A-nodosum_M_contig877.1.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 2.420e-41
Identity = 122/314 (38.85%), Postives = 179/314 (57.01%), Query Frame = 0
Query:  113 SCVQVSSSKFSTPCPCGLTSS-SFSVVGETSVAKLRVNLAVVLDGSDSVGSANFLVQREFAKNIIAAFAERNLFANGGTASYVQYSSFVDASDTGTFFSLKDFNNFVDNN-QFNGGGTDDIDGGITAARYLLNAAPPASVAIMIVLTVGINIIIGTAADDSRADGITLYALGIGVSVSVGVLLPIAGNIGSVLGAVLLAIAGSEDNVFSVDDFEGLQAVVSVILGVVGTSTVACPATNAVLIVEY-GATVDSVVSDPDATLSNNIVAFFVSDLEDNPTTFTVILDTCGATEPVDPVVSITYSDNQGNSPDFTEL 423
            SCVQV+S  ++  CPC      SF++ G+T+V    VN+AV++D S SV S  + +   FAKN +++FA++NLF NGG+AS  Q+S+   AS+ GTF+SL+DFN+FVD + ++   GT+ I  GI   R LLNA+P  + + MIV+T G +      AD +RA+G  +YA+G+G   +                +VLL IAG + N FSVDDF+ L  ++S        S+V C AT A + VE+ G    + V    AT             E  PT F V LD CG  E  + + S++Y+D++GN+PD + L
Sbjct:   24 SCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANTVNVAVIIDSSGSVNSDEWDMSIAFAKNAVSSFADQNLFTNGGSASIAQFSN--SASEGGTFYSLEDFNDFVDGSTKYQSQGTNII-AGIAKGRELLNASPTTT-SFMIVITDGQSSSPKDEADAARAEGTIVYAVGVGSGPTE---------------SVLLDIAGDDSNKFSVDDFDELDGILSA-----SGSSVPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYTDDEGNTPDLSSL 313          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig877.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FY49_ECTSI1.540e-5643.32Similar to collagen, partial n=2 Tax=Ectocarpus si... [more]
A0A6H5JRK3_9PHAE5.730e-5142.99VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHN6_ECTSI4.390e-5043.45Glycin-rich protein n=1 Tax=Ectocarpus siliculosus... [more]
D8LLU2_ECTSI2.640e-4439.49Similar to integrin alpha Hr1-like n=1 Tax=Ectocar... [more]
A0A6H5KCW7_9PHAE4.640e-4340.61VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JR61_9PHAE2.090e-4242.14VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G513_ECTSI2.730e-4236.66VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JNZ2_9PHAE2.420e-4138.85VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 147..334
e-value: 3.5E-6
score: 36.6
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 149..329
e-value: 1.9E-14
score: 54.3
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 149..333
score: 15.870614
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 140..347
e-value: 5.9E-22
score: 80.3
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 125..335
NoneNo IPR availableCDDcd01450vWFA_subfamily_ECMcoord: 148..297
e-value: 1.0486E-8
score: 52.2938

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig877contigA-nodosum_M_contig877:118181..123507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig877.1.1mRNA_A-nodosum_M_contig877.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig877 118122..124931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig877.1.1 ID=prot_A-nodosum_M_contig877.1.1|Name=mRNA_A-nodosum_M_contig877.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=465bp
MSLLQVQVSFPTHPPSHIIRRLKTLITRPPHAAPLLHRPTSIYLPFDCTL
STSSSDKVIFLTRQHRVQIDTLGNITRLPSGKMALLKVFSVLATMLLGHL
NLAFAQDSDTGVSCVQVSSSKFSTPCPCGLTSSSFSVVGETSVAKLRVNL
AVVLDGSDSVGSANFLVQREFAKNIIAAFAERNLFANGGTASYVQYSSFV
DASDTGTFFSLKDFNNFVDNNQFNGGGTDDIDGGITAARYLLNAAPPASV
AIMIVLTVGINIIIGTAADDSRADGITLYALGIGVSVSVGVLLPIAGNIG
SVLGAVLLAIAGSEDNVFSVDDFEGLQAVVSVILGVVGTSTVACPATNAV
LIVEYGATVDSVVSDPDATLSNNIVAFFVSDLEDNPTTFTVILDTCGATE
PVDPVVSITYSDNQGNSPDFTELLDITSDSTCPPATSPPTPLESLGAPFE
PCMCGRLGIARGRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf