prot_A-nodosum_M_contig876.24.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig876.24.1
Unique Nameprot_A-nodosum_M_contig876.24.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length351
Homology
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BLAST of mRNA_A-nodosum_M_contig876.24.1 vs. uniprot
Match: A0A6H5L5T7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5T7_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.330e-25
Identity = 73/172 (42.44%), Postives = 98/172 (56.98%), Query Frame = 0 
Query:  180 LKRMRIAEKVTAAEAIRLQREADPSVLIRRFLRCSGLPLDHIFAASVRIYTRSRLRSGFLKWRVSSAAETQRHHHRMKAIAALQAFLRLSIAHRTAAQHPLEHGPATRRSCGVIQNAFRKHLARRSVLACITRIDQHELEESTKTEQEMDTLEAENRRRSEACKVIQTAWRG 351
            L+R+R  E++ A E +RL+READP V+IRRF R SGLPLDHIFA +  +Y RSRLR+    W   + AET   ++R++A   +Q   R+ IA  TA +     GPA   +  +IQ  FR   AR  V      + Q   +E  K     +T + E RRR +A  VIQ AWRG
Sbjct:    4 LQRIRADEQIMAEEVVRLRREADPRVMIRRFWRSSGLPLDHIFATAAGVYRRSRLRTALSTWHSVAKAETHHINYRIEAAEVIQRATRVFIARHTAERRRRVRGPAVLAASRMIQAEFRSRKAR--VKTADVAVRQQNRQELRKRYWCDETAKDEQRRR-DASTVIQAAWRG 172
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig876.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L5T7_9PHAE3.330e-2542.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig876contigA-nodosum_M_contig876:209638..211175 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig876.24.1mRNA_A-nodosum_M_contig876.24.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig876 209489..211175 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig876.24.1 ID=prot_A-nodosum_M_contig876.24.1|Name=mRNA_A-nodosum_M_contig876.24.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=351bp
MDQKTECDQGVLFGGDCERRIFYPTTPHKVHVDLEGGRQRSANPLAALRL
TPSSPYVGLRIAATVSTPNEHGKVVSRSKFRDHQEEQRSTELYACQQETA
AELSPRRSTSLRGRVSTSPPRKYINSSAQQITNGSVFSSQWSERYGVAGR
SHNIRILRDDNLAISSRCEEDNNRPINTQLKRMRIAEKVTAAEAIRLQRE
ADPSVLIRRFLRCSGLPLDHIFAASVRIYTRSRLRSGFLKWRVSSAAETQ
RHHHRMKAIAALQAFLRLSIAHRTAAQHPLEHGPATRRSCGVIQNAFRKH
LARRSVLACITRIDQHELEESTKTEQEMDTLEAENRRRSEACKVIQTAWR
G
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