prot_A-nodosum_M_contig876.16.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig876.16.1
Unique Name	prot_A-nodosum_M_contig876.16.1
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	58

Homology

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BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot
Match: D8LTN8_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN8_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 1.240e-29
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0

Query:    2 VSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGGSR 57
            VSMVKQ+LQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVA GGTIHMVLQLRGGSR
Sbjct:   23 VSMVKQSLQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAPGGTIHMVLQLRGGSR 78

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BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot
Match: A0A836CG90_9STRA (Ubiquitin-related domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG90_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.850e-24
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0

Query:    2 VSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGG 55
            V +VKQALQEKEGIQVDQIRLIYSGKQL+D+ TLS YNVAAGGTIHMVLQLRGG
Sbjct:   23 VLLVKQALQEKEGIQVDQIRLIYSGKQLSDNQTLSQYNVAAGGTIHMVLQLRGG 76

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BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot
Match: A0A5D6XU42_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XU42_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.010e-24
Identity = 48/51 (94.12%), Postives = 48/51 (94.12%), Query Frame = 0

Query:    5 VKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGG 55
            VKQALQEKEGIQVDQIRLIYSGKQLADD TL  YNVAAGGTIHMVLQLRGG
Sbjct:   16 VKQALQEKEGIQVDQIRLIYSGKQLADDKTLQDYNVAAGGTIHMVLQLRGG 66

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BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot
Match: K3WSN3_GLOUD (Ubiquitin-like domain-containing protein n=8 Tax=Oomycota TaxID=4762 RepID=K3WSN3_GLOUD)

HSP 1 Score: 94.7 bits (234), Expect = 2.230e-24
Identity = 48/51 (94.12%), Postives = 48/51 (94.12%), Query Frame = 0

Query:    5 VKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGG 55
            VKQALQEKEGIQVDQIRLIYSGKQLADD TL  YNVAAGGTIHMVLQLRGG
Sbjct:   20 VKQALQEKEGIQVDQIRLIYSGKQLADDKTLQDYNVAAGGTIHMVLQLRGG 70

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BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot
Match: A0A7S1V0J3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V0J3_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 5.390e-23
Identity = 45/52 (86.54%), Postives = 49/52 (94.23%), Query Frame = 0

Query:    5 VKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGGS 56
            VKQALQEKEGIQVDQIRLI+SGKQL+DD +L HYN+AAG TIHMVLQLRGGS
Sbjct:   58 VKQALQEKEGIQVDQIRLIHSGKQLSDDKSLEHYNIAAGATIHMVLQLRGGS 109

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BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot
Match: M4BXH5_HYAAE (Ubiquitin-like domain-containing protein n=25 Tax=Oomycota TaxID=4762 RepID=M4BXH5_HYAAE)

HSP 1 Score: 90.9 bits (224), Expect = 8.810e-23
Identity = 46/51 (90.20%), Postives = 46/51 (90.20%), Query Frame = 0

Query:    5 VKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGG 55
            VKQALQEKEGIQVDQIRLIYSGKQLADD TL  YNV  GGTIHMVLQLRGG
Sbjct:   26 VKQALQEKEGIQVDQIRLIYSGKQLADDKTLQDYNVEPGGTIHMVLQLRGG 76

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BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot
Match: A0A1E7FL88_9STRA (Putative ubiquitin-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FL88_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.430e-22
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 0

Query:    5 VKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGGS 56
            VKQ+LQEKEGIQVDQIRLI+SGKQLADD TL  YN+AAG TIHMVLQLRGGS
Sbjct:   26 VKQSLQEKEGIQVDQIRLIHSGKQLADDKTLESYNIAAGATIHMVLQLRGGS 77

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BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot
Match: A0A662Y152_9STRA (Ubiquitin-like domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y152_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 6.760e-22
Identity = 48/57 (84.21%), Postives = 48/57 (84.21%), Query Frame = 0

Query:    5 VKQALQEKEGIQVDQIRLIYSGKQL------ADDHTLSHYNVAAGGTIHMVLQLRGG 55
            VKQALQEKEGIQVDQIRLIYSGKQL      ADD TL  YNVAAGGTIHMVLQLRGG
Sbjct:    4 VKQALQEKEGIQVDQIRLIYSGKQLYVGSRVADDKTLQDYNVAAGGTIHMVLQLRGG 60

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BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot
Match: F0Y7G2_AURAN (Ubiquitin-like domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7G2_AURAN)

HSP 1 Score: 88.2 bits (217), Expect = 9.760e-22
Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 0

Query:    2 VSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGG 55
            V  +KQ+LQEKEGIQVDQIRLIYSGKQLADD  +  YN+ AGGTIHMVLQLRGG
Sbjct:   22 VRTIKQSLQEKEGIQVDQIRLIYSGKQLADDKKIEFYNIQAGGTIHMVLQLRGG 75

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BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot
Match: A0A024GPK4_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GPK4_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.250e-21
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 0

Query:    5 VKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGGSR 57
            VK+ALQEKEGIQV+QIRLIYSG+QL+DD TL  YNV AGGTIHMVLQLRGG +
Sbjct:   26 VKEALQEKEGIQVNQIRLIYSGRQLSDDKTLQDYNVLAGGTIHMVLQLRGGQK 78

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig876.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LTN8_ECTSI	1.240e-29	96.43	Ubiquitin-like domain-containing protein n=2 Tax=E...	[more]
A0A836CG90_9STRA	1.850e-24	88.89	Ubiquitin-related domain-containing protein n=1 Ta...	[more]
A0A5D6XU42_9STRA	2.010e-24	94.12	Ubiquitin-like domain-containing protein n=1 Tax=P...	[more]
K3WSN3_GLOUD	2.230e-24	94.12	Ubiquitin-like domain-containing protein n=8 Tax=O...	[more]
A0A7S1V0J3_9STRA	5.390e-23	86.54	Hypothetical protein n=1 Tax=Grammatophora oceanic...	[more]
M4BXH5_HYAAE	8.810e-23	90.20	Ubiquitin-like domain-containing protein n=25 Tax=...	[more]
A0A1E7FL88_9STRA	1.430e-22	86.54	Putative ubiquitin-like protein n=1 Tax=Fragilario...	[more]
A0A662Y152_9STRA	6.760e-22	84.21	Ubiquitin-like domain-containing protein (Fragment...	[more]
F0Y7G2_AURAN	9.760e-22	79.63	Ubiquitin-like domain-containing protein (Fragment...	[more]
A0A024GPK4_9STRA	1.250e-21	81.13	Ubiquitin-like domain-containing protein n=2 Tax=A...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 32..53 score: 46.94 coord: 11..31 score: 64.83
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..51 e-value: 1.0E-4 score: 31.7
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 2..53 e-value: 2.1E-18 score: 65.9
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..55 score: 19.390202
None	No IPR available	GENE3D	3.10.20.90		coord: 1..56 e-value: 2.5E-22 score: 80.8
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 2..56
None	No IPR available	PANTHER	PTHR10666:SF348	UBIQUITIN-60S RIBOSOMAL PROTEIN L40-2	coord: 2..56
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 2..55

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig876	contig	A-nodosum_M_contig876:159967..160362 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig876.16.1	mRNA_A-nodosum_M_contig876.16.1	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig876 158225..161140 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig876.16.1 ID=prot_A-nodosum_M_contig876.16.1|Name=mRNA_A-nodosum_M_contig876.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=58bp
MVSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVL
QLRGGSR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019956	Ubiquitin_dom
IPR000626	Ubiquitin-like_dom
IPR029071	Ubiquitin-like_domsf