prot_A-nodosum_M_contig875.30.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig875.30.1
Unique Nameprot_A-nodosum_M_contig875.30.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length168
Homology
BLAST of mRNA_A-nodosum_M_contig875.30.1 vs. uniprot
Match: D8LDB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB6_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 7.460e-18
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 0
Query:   94 DDSLVCVLSETARSRKQVNVKKWKGNIQVDVREYFAKDHGEYAPSKKGITLNPSQWDIIRTAMNDIDAMV 163
            D  LVCVL ET  +RKQVNV+ W     VD+RE++ K+  EY P KKG++LNPSQW+I+R+A   IDA +
Sbjct:  185 DGDLVCVLGETKSARKQVNVRTWNKRTLVDIREFYLKEAKEYRPGKKGMSLNPSQWEILRSAAGQIDANI 254          
BLAST of mRNA_A-nodosum_M_contig875.30.1 vs. uniprot
Match: A0A7S2XTJ7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTJ7_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.280e-10
Identity = 27/57 (47.37%), Postives = 41/57 (71.93%), Query Frame = 0
Query:  109 KQVNVKKWKGNIQVDVREYFA-KDHGEYAPSKKGITLNPSQWDIIRTAMNDIDAMVE 164
            K+VNV+ +KG + +D+REY+   D GE  P KKGI+LNP QW+ ++  M+D+D  +E
Sbjct:   54 KKVNVRTFKGRVLIDIREYYLHSDSGEERPGKKGISLNPDQWEALKEIMSDVDNAIE 110          
BLAST of mRNA_A-nodosum_M_contig875.30.1 vs. uniprot
Match: A0A6I9QA16_ELAGV (LOW QUALITY PROTEIN: RNA polymerase II transcriptional coactivator KIWI n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9QA16_ELAGV)

HSP 1 Score: 63.9 bits (154), Expect = 2.710e-10
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   95 DSLVCVLSETARSRKQVNVKKWKGNIQVDVREYFAKDHGEYAPSKKGITLNPSQWDIIRTAMNDIDAMVEAKS 167
            D ++C LS+  R    V V++WKG + VD RE++ KD G+  P KKGITL   QW I+   ++DID  +  K+
Sbjct:   35 DIVICELSQNRR----VAVRRWKGKLLVDFREFYVKD-GKQLPGKKGITLTVDQWKILHDHIDDIDKALTEKA 102          
BLAST of mRNA_A-nodosum_M_contig875.30.1 vs. uniprot
Match: H2ZUX1_LATCH (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H2ZUX1_LATCH)

HSP 1 Score: 62.0 bits (149), Expect = 5.960e-10
Identity = 24/50 (48.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:  111 VNVKKWKGNIQVDVREYFAKDHGEYAPSKKGITLNPSQWDIIRTAMNDID 160
            VNV+++KG + +D+REY+    GE  P +KGI+LNP QW+ ++  M+DID
Sbjct:   10 VNVREFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKEQMSDID 59          
BLAST of mRNA_A-nodosum_M_contig875.30.1 vs. uniprot
Match: A0A8C9VBN4_SCLFO (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9VBN4_SCLFO)

HSP 1 Score: 64.3 bits (155), Expect = 7.400e-10
Identity = 30/85 (35.29%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   80 SCRGGHIDRDGKHEDDSLVCVLSETARSRKQVNVKKWKGNIQVDVREYFAKDHGEYAPSKKGITLNPSQWDIIRTAMNDIDAMVE 164
            S R G   R G  +DD++  +        + V+V+ +KG + +D+REY+    GE  P +KGI+LNP QW+ ++  +++IDA V+
Sbjct:   82 SSRAGGSSRGGASKDDNMFQI-----GKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKEQISEIDAAVK 161          
BLAST of mRNA_A-nodosum_M_contig875.30.1 vs. uniprot
Match: D8RF80_SELML (PC4 domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RF80_SELML)

HSP 1 Score: 62.0 bits (149), Expect = 1.000e-9
Identity = 30/77 (38.96%), Postives = 52/77 (67.53%), Query Frame = 0
Query:   89 DGKHEDDSL-VCVLSETARSRKQVNVKKWKGNIQVDVREYFAKDHGEYAPSKKGITLNPSQWDIIRTAMNDIDAMVE 164
            D K +++S+ VC +S+     ++V+V+KW+G + VD+REY+ K  GE  P KKGI+L   QW++++  +  ID+ V+
Sbjct:   12 DEKEDEESVAVCEISKN----RKVSVRKWRGQVLVDIREYWYKG-GECLPGKKGISLTMDQWNVLQEHVKQIDSAVQ 83          
BLAST of mRNA_A-nodosum_M_contig875.30.1 vs. uniprot
Match: A0A8J6FI17_ELECQ (Activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6FI17_ELECQ)

HSP 1 Score: 62.0 bits (149), Expect = 1.000e-9
Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:  111 VNVKKWKGNIQVDVREYFAKDHGEYAPSKKGITLNPSQWDIIRTAMNDID 160
            V+V+ +KG + VD+REYF  + GE  P +KGI+LNP QW+ ++  M+DID
Sbjct:   31 VSVRDFKGKVLVDIREYFMDNQGEMKPGRKGISLNPEQWNQLKEQMSDID 80          
BLAST of mRNA_A-nodosum_M_contig875.30.1 vs. uniprot
Match: A0A1J4KBY2_9EUKA (Activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KBY2_9EUKA)

HSP 1 Score: 62.8 bits (151), Expect = 1.050e-9
Identity = 24/72 (33.33%), Postives = 49/72 (68.06%), Query Frame = 0
Query:   93 EDDSLVCVLSETARSRKQVNVKKWKGNIQVDVREYFAKDHGEYAPSKKGITLNPSQWDIIRTAMNDIDAMVE 164
            ++ + V  + + +  ++QV + K+KG ++VD+REY+A D+ E+ P+KKG++L+ +QW  + + M  I+  +E
Sbjct:   40 KEKAYVFPIGQNSMGKRQVQISKFKGKVRVDIREYYADDNDEWKPTKKGLSLDATQWGKLCSLMGMINEAIE 111          
BLAST of mRNA_A-nodosum_M_contig875.30.1 vs. uniprot
Match: A0A803KIA5_XENTR (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A803KIA5_XENTR)

HSP 1 Score: 63.2 bits (152), Expect = 1.420e-9
Identity = 31/85 (36.47%), Postives = 49/85 (57.65%), Query Frame = 0
Query:   76 RTTGSCRGGHIDRDGKHEDDSLVCVLSETARSRKQVNVKKWKGNIQVDVREYFAKDHGEYAPSKKGITLNPSQWDIIRTAMNDID 160
            +T  S +GG   R     +D++  +        + V+V+ +KG + +DVREYF    GE  P +KGI+LNP QW+ ++  M+DID
Sbjct:   60 KTGESSKGGASSRQSNAPEDNMFQI-----GKMRYVSVRDFKGKVLIDVREYFMDQAGEMKPGRKGISLNPEQWNQLKEQMSDID 139          
BLAST of mRNA_A-nodosum_M_contig875.30.1 vs. uniprot
Match: A0A3B3TBF2_9TELE (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3TBF2_9TELE)

HSP 1 Score: 62.4 bits (150), Expect = 1.810e-9
Identity = 31/85 (36.47%), Postives = 48/85 (56.47%), Query Frame = 0
Query:   80 SCRGGHIDRDGKHEDDSLVCVLSETARSRKQVNVKKWKGNIQVDVREYFAKDHGEYAPSKKGITLNPSQWDIIRTAMNDIDAMVE 164
            S  GG   +     DD+L  +        + V+V+ +KG + +D+REY+    GE  P KKGI+LNP QW+ ++  M+DID  V+
Sbjct:   44 SSAGGDSSKATGKSDDNLFQI-----GKMRYVSVRDFKGKVLIDIREYWMDQQGEMKPGKKGISLNPEQWNQLKEQMSDIDEAVK 123          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig875.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDB6_ECTSI7.460e-1854.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XTJ7_9STRA1.280e-1047.37Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6I9QA16_ELAGV2.710e-1042.47LOW QUALITY PROTEIN: RNA polymerase II transcripti... [more]
H2ZUX1_LATCH5.960e-1048.00Activated RNA polymerase II transcriptional coacti... [more]
A0A8C9VBN4_SCLFO7.400e-1035.29Activated RNA polymerase II transcriptional coacti... [more]
D8RF80_SELML1.000e-938.96PC4 domain-containing protein n=2 Tax=Selaginella ... [more]
A0A8J6FI17_ELECQ1.000e-950.00Activated RNA polymerase II transcriptional coacti... [more]
A0A1J4KBY2_9EUKA1.050e-933.33Activated RNA polymerase II transcriptional coacti... [more]
A0A803KIA5_XENTR1.420e-936.47Activated RNA polymerase II transcriptional coacti... [more]
A0A3B3TBF2_9TELE1.810e-936.47Activated RNA polymerase II transcriptional coacti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10Transcriptional Coactivator Pc4; Chain Acoord: 105..165
e-value: 6.1E-19
score: 69.4
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 106..164
IPR003173Transcriptional coactivator p15 (PC4), C-terminalPFAMPF02229PC4coord: 107..152
e-value: 1.1E-16
score: 60.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..95
IPR045125RNA polymerase II transcriptional coactivator Sub1/Tcp4-likePANTHERPTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORcoord: 31..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig875contigA-nodosum_M_contig875:280437..282664 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig875.30.1mRNA_A-nodosum_M_contig875.30.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig875 279489..285230 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig875.30.1 ID=prot_A-nodosum_M_contig875.30.1|Name=mRNA_A-nodosum_M_contig875.30.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=168bp
MDEIEAEANAVTSPPREVKPKDAVGTSKTHSTEVNSKPSKRKKSESRDSA
SGMKEARGKTREPSRADKKISKPNGRTTGSCRGGHIDRDGKHEDDSLVCV
LSETARSRKQVNVKKWKGNIQVDVREYFAKDHGEYAPSKKGITLNPSQWD
IIRTAMNDIDAMVEAKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009044ssDNA-bd_transcriptional_reg
IPR003173PC4_C
IPR045125Sub1/Tcp4-like