prot_A-nodosum_M_contig875.27.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig875.27.1
Unique Nameprot_A-nodosum_M_contig875.27.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length200
Homology
BLAST of mRNA_A-nodosum_M_contig875.27.1 vs. uniprot
Match: D8LDC6_ECTSI (Eukaryotic initiation factor 4E n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDC6_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 6.060e-105
Identity = 149/191 (78.01%), Postives = 170/191 (89.01%), Query Frame = 0
Query:    9 SGEGAQHPLQHRWALWYDNSKLKAATETWEENLKHIMAFDTVEDFWALFNNVKPPSMLTMNSNYSVFKEGVKPMWEDNTNCQGGKSVLTLKGEDMGQLDQWWLRAVLAAIGEILEDPDSEPEVCGLVVSLRKNQHRIALWTKTCEQSRVVPACKKLKEALKLPARLKLSFQTHSEAAKSQSSFQNSAQFEV 199
            +GE A+HPLQHRWALWYDN+KLKAATETW +NLKHI+AF+TV++FWALFNNV PPSML++ SNYSVFKEGVKPMWED  N QGGK VLT+KGED+ QLDQWWL AVL+AIGE LE  +++PEVCGLVVSLRK QHRIALWTKTCE+SRVVP  KKLKEALKLPARLK  FQTHS+A  S SSFQN+++FEV
Sbjct:   13 TGEVARHPLQHRWALWYDNAKLKAATETWADNLKHILAFETVQEFWALFNNVMPPSMLSVQSNYSVFKEGVKPMWEDTANRQGGKFVLTVKGEDLPQLDQWWLHAVLSAIGETLES-ETDPEVCGLVVSLRKGQHRIALWTKTCEESRVVPVAKKLKEALKLPARLKFVFQTHSDAVSSLSSFQNASRFEV 202          
BLAST of mRNA_A-nodosum_M_contig875.27.1 vs. uniprot
Match: A0A1V9YGZ3_9STRA (Eukaryotic initiation factor 4E n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGZ3_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.160e-61
Identity = 100/187 (53.48%), Postives = 127/187 (67.91%), Query Frame = 0
Query:   14 QHPLQHRWALWYDNSKLKAATETWEENLKHIMAFDTVEDFWALFNNVKPPSMLTMNSNYSVFKEGVKPMWEDNTNCQGGKSVLTLKGEDMGQLDQWWLRAVLAAIGEILEDPDSEPEVCGLVVSLRKNQHRIALWTKTCEQSRVVPAC-KKLKEALKLPARLKLSFQTHSEAAKSQSSFQNSAQFEV 199
            +HPLQH+W LWYDN K K ATETWEENLK I  FDTVEDFW LFNNV PP+ L+  SNY +FKEG++PMWED  N +GGK +LT   +   +LD  W+  +LA IGE LED D   +VCG VVS+RK+Q R+A+WTKT     +  A  +  ++ L L     L FQ+H++AA S SSFQN   ++ 
Sbjct:   46 KHPLQHKWVLWYDNPKKKLATETWEENLKKIYTFDTVEDFWCLFNNVLPPTKLSTGSNYHLFKEGIRPMWEDPINMKGGKWILTNTRQRRARLDDSWMHVMLALIGEALEDDD---DVCGCVVSVRKSQDRLAVWTKTAVNEPLQRAVGRNFRKVLDLGKNEVLKFQSHADAAASGSSFQNEVLYDA 229          
BLAST of mRNA_A-nodosum_M_contig875.27.1 vs. uniprot
Match: A0A836CHN5_9STRA (Translation initiation factor eIF 4e-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHN5_9STRA)

HSP 1 Score: 196 bits (497), Expect = 4.850e-60
Identity = 101/207 (48.79%), Postives = 134/207 (64.73%), Query Frame = 0
Query:    4 EGGATSGEGAQ----------HPLQHRWALWYDNSKLKAATETWEENLKHIMAFDTVEDFWALFNNVKPPSMLTMNSNYSVFKEGVKPMWEDNTNCQGGKSVLTLKGEDMGQLDQWWLRAVLAAIGEILEDPDSEPEVCGLVVSLRKNQHRIALWTKTCEQSRVVPAC-KKLKEALKLPARLKLSFQTHSEAAKSQSSFQNSAQFEV 199
            EG AT G+  Q          HPL+  W LW+DN KLK   E+WE+ LK+IM+F TVEDFW L+ N+ P S +   SNYSVFK G+KPMWED  N +GGK VLT+   +   +D+WWL ++LA IG  LE    E E+CGLVVS RK+Q RI+LWT+T E   +V     +L++AL LP R +L +QTH +A  + SSF+N A ++ 
Sbjct:   12 EGEATEGQKEQQQQQVDLSVKHPLEDSWTLWFDNPKLKKPEESWEDTLKNIMSFSTVEDFWCLYGNILPASRIPSGSNYSVFKHGIKPMWEDPQNAKGGKWVLTVGRGERKHMDEWWLHSLLAVIGGTLELEGHE-EICGLVVSARKSQDRISLWTRTAETPELVHQIGTRLRQALNLPDRFQLKYQTHDDALNTGSSFKNKALYQA 217          
BLAST of mRNA_A-nodosum_M_contig875.27.1 vs. uniprot
Match: A0A067CRQ2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRQ2_SAPPC)

HSP 1 Score: 194 bits (494), Expect = 1.380e-59
Identity = 97/189 (51.32%), Postives = 127/189 (67.20%), Query Frame = 0
Query:   12 GAQHPLQHRWALWYDNSKLKAATETWEENLKHIMAFDTVEDFWALFNNVKPPSMLTMNSNYSVFKEGVKPMWEDNTNCQGGKSVLTLKGEDMGQLDQWWLRAVLAAIGEILEDPDSEPEVCGLVVSLRKNQHRIALWTKTCEQSRVVPAC-KKLKEALKLPARLKLSFQTHSEAAKSQSSFQNSAQFEV 199
            G +HPLQH+W LWYDN K K ATE+WEENLK I  F+TVEDFW LFNNV PP+ L+  SNY +FKEG++PMWED  N +GGK +LT   +   +LD  W+  +LA IGE LED D   ++CG VVS+RK+Q R+A+WTKT     +     +  ++ L L     L FQ+H++AA S SSFQN   ++ 
Sbjct:   32 GPKHPLQHKWVLWYDNPKKKLATESWEENLKLIYTFETVEDFWCLFNNVLPPTKLSTGSNYHLFKEGIRPMWEDPINMKGGKWILTNTRQRRPRLDDSWMHVMLALIGEALEDED---DICGCVVSVRKSQDRLAVWTKTAVNEPLQRTVGRNFRKVLDLGKNEVLKFQSHADAAASGSSFQNEVLYDA 217          
BLAST of mRNA_A-nodosum_M_contig875.27.1 vs. uniprot
Match: A0A485L311_9STRA (Aste57867_15132 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L311_9STRA)

HSP 1 Score: 192 bits (489), Expect = 7.650e-59
Identity = 93/187 (49.73%), Postives = 126/187 (67.38%), Query Frame = 0
Query:   14 QHPLQHRWALWYDNSKLKAATETWEENLKHIMAFDTVEDFWALFNNVKPPSMLTMNSNYSVFKEGVKPMWEDNTNCQGGKSVLTLKGEDMGQLDQWWLRAVLAAIGEILEDPDSEPEVCGLVVSLRKNQHRIALWTKTCEQSRVVPAC-KKLKEALKLPARLKLSFQTHSEAAKSQSSFQNSAQFEV 199
            +HPLQHRW LWYDN K K   E+WEENLK + +FDTVEDFW +FNN+ PPS L+  SNY +FKEG++PMWED  N +GGK VLT + +   +LD  W+  +LA IGE LED D   ++CG VVS+RK Q R+A+WTKT     +     +  ++ L+L     L +Q+H++AA S SS+QN   ++ 
Sbjct:   33 KHPLQHRWVLWYDNPKKKLPNESWEENLKVVYSFDTVEDFWCMFNNILPPSKLSTGSNYHLFKEGIRPMWEDPINAKGGKWVLTNQRQRRARLDDCWMHTMLALIGECLEDED---DLCGAVVSVRKAQDRVAVWTKTATNEPLQKTVGRNFRKVLELAKNEVLKYQSHADAAASGSSYQNEVVYDA 216          
BLAST of mRNA_A-nodosum_M_contig875.27.1 vs. uniprot
Match: A0A6U3SLU4_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U3SLU4_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.160e-58
Identity = 95/189 (50.26%), Postives = 129/189 (68.25%), Query Frame = 0
Query:   13 AQHPLQHRWALWYDNSKLKAATETWEENLKHIMAFDTVEDFWALFNNVKPPSMLTMNSNYSVFKEGVKPMWEDNTNCQGGKSVLTLKGEDM--GQLDQWWLRAVLAAIGEILEDPDSEPEVCGLVVSLRKNQHRIALWTKTCEQSRVVPACKKLKEALKLPARLKLSFQTHSEAAKSQSSFQNSAQFEV 199
            A  PL H+W LWYDN +   A  +W++NLK   +FD+ E FW +FNNVKP S L++NSNY +F+EGV+PMWED  N +GGK VLT+  +D   G+ D+WWL  VLA IGE L+    E  VCG VVS+RK+Q RIALW K+  + + VP  ++ K AL++ ++  L +Q H +AA S SSF+N  +FEV
Sbjct:   10 ASLPLHHKWVLWYDNPRQAPAGSSWKDNLKKCGSFDSAEAFWQVFNNVKPASQLSVNSNYHIFREGVEPMWEDPENMEGGKFVLTIPKKDSKAGRGDEWWLFTVLAVIGETLDVGGDE--VCGAVVSIRKSQDRIALWLKSAVRDKCVPIAERWKRALEVTSKTTLKYQVHKDAAASGSSFKNEIKFEV 196          
BLAST of mRNA_A-nodosum_M_contig875.27.1 vs. uniprot
Match: A0A6G0X5M7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5M7_9STRA)

HSP 1 Score: 189 bits (479), Expect = 4.490e-57
Identity = 92/187 (49.20%), Postives = 122/187 (65.24%), Query Frame = 0
Query:   14 QHPLQHRWALWYDNSKLKAATETWEENLKHIMAFDTVEDFWALFNNVKPPSMLTMNSNYSVFKEGVKPMWEDNTNCQGGKSVLTLKGEDMGQLDQWWLRAVLAAIGEILEDPDSEPEVCGLVVSLRKNQHRIALWTKTCEQSRVVPAC-KKLKEALKLPARLKLSFQTHSEAAKSQSSFQNSAQFEV 199
            +HPLQHRW LWYDN K K   E+WEENLK +  FDTVEDFW +FNN+ PP+ L   SNY +FK G++PMWED  N +GGK VLT   +   +LD  W+  +LA IGE LED D   ++CG VVS+RK Q RIA+WTKT     +     +  ++ L+L     L +Q+H++AA S SS+QN   ++ 
Sbjct:   52 KHPLQHRWVLWYDNPKKKLPNESWEENLKTVYTFDTVEDFWCMFNNILPPTKLASGSNYHLFKHGIRPMWEDPINAKGGKWVLTNSRQRRARLDDAWMHTMLALIGECLEDDD---DLCGAVVSVRKAQDRIAVWTKTATNESLQKVVGRNFRKVLELNKNEVLKYQSHADAAASGSSYQNEVVYDA 235          
BLAST of mRNA_A-nodosum_M_contig875.27.1 vs. uniprot
Match: A0A7S2JX99_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JX99_9STRA)

HSP 1 Score: 186 bits (471), Expect = 2.180e-56
Identity = 92/186 (49.46%), Postives = 126/186 (67.74%), Query Frame = 0
Query:   16 PLQHRWALWYDNSKLKAATETWEENLKHIMAFDTVEDFWALFNNVKPPSMLTMNSNYSVFKEGVKPMWEDNTNCQGGKSVLTL--KGEDMGQLDQWWLRAVLAAIGEILEDPDSEPEVCGLVVSLRKNQHRIALWTKTCEQSRVVPACKKLKEALKLPARLKLSFQTHSEAAKSQSSFQNSAQFEV 199
            PL ++W LWYDN +  A   +W+ENLK+   FDT E+FW +FNNVKP S L+ NSNY +FK+GV+PMWED  N +GGK VLT+  K    G+ D+WWL  VLA +GE L++      VCG VVS+RK+Q RIALW ++ +    V   ++ K AL++ +R  L +Q+H +AA S SSF+N  +FEV
Sbjct:   13 PLHNKWVLWYDNPRQAAPGASWKENLKYCGEFDTAENFWRIFNNVKPASQLSTNSNYHIFKKGVEPMWEDPMNAKGGKWVLTIPKKESKAGRCDEWWLHTVLAVVGETLDETGDI--VCGCVVSIRKSQDRIALWLRSNQFDLAVKTGQRWKRALEVSSRTVLKYQSHQDAAASGSSFKNEVKFEV 196          
BLAST of mRNA_A-nodosum_M_contig875.27.1 vs. uniprot
Match: W4G8U0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G8U0_9STRA)

HSP 1 Score: 186 bits (472), Expect = 4.150e-56
Identity = 93/190 (48.95%), Postives = 125/190 (65.79%), Query Frame = 0
Query:   14 QHPLQHRWALWYDNSKLKAATETWEENLKHIMAFDTVEDFWALFNNVKPPSMLTMNSNYSVFKEGVKPMWEDNTNCQGGKSVLTLKGEDMGQLDQWWLRAVLAAIGEILEDPDSEPEVCGLVVSLRKNQHRIALWTKTCEQSRVVPACKKL----KEALKLPARLKLSFQTHSEAAKSQSSFQNSAQFEV 199
            +HPLQHRW LWYDN K K A E+WEENLK +  FDTVEDFW +FNN+ PP+ L + SNY +FKEG++PMWED  N +GGK VLT   +   +LD  W+  +LA IGE LED D   ++ G VVS+RK Q R+A+WT+T       P  +K+    ++ L L     L +Q+H++AA S SS+QN   ++ 
Sbjct:   45 KHPLQHRWVLWYDNPKKKLANESWEENLKVVYTFDTVEDFWGMFNNILPPTKLLVGSNYHLFKEGIRPMWEDPINAKGGKWVLTNNRQRRARLDDAWMNTMLALIGECLEDDD---DLSGAVVSVRKTQDRVAVWTQTATNE---PLQRKVGSNFRKVLDLSKNEGLKYQSHADAAASGSSYQNEVVYDA 228          
BLAST of mRNA_A-nodosum_M_contig875.27.1 vs. uniprot
Match: A0A024UKG8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKG8_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.370e-55
Identity = 91/187 (48.66%), Postives = 125/187 (66.84%), Query Frame = 0
Query:   14 QHPLQHRWALWYDNSKLKAATETWEENLKHIMAFDTVEDFWALFNNVKPPSMLTMNSNYSVFKEGVKPMWEDNTNCQGGKSVLTLKGEDMGQLDQWWLRAVLAAIGEILEDPDSEPEVCGLVVSLRKNQHRIALWTKTCEQSRVVPACK-KLKEALKLPARLKLSFQTHSEAAKSQSSFQNSAQFEV 199
            +HPLQH+W LWYDN K K A+ETWEE+LK + +FDTVEDFW +FNN+ PP+ L + SNY +FKEG++PMWED  N +GGK VLT   +   +LD  W+  +LA IGE LED D   ++ G VVS+RK Q RIA+WT+T    ++        ++ L L     L +Q+H++AA S SS+QN   ++ 
Sbjct:   45 KHPLQHKWVLWYDNPKKKLASETWEESLKVVYSFDTVEDFWGMFNNILPPTKLHVGSNYHLFKEGIRPMWEDPINAKGGKWVLTNNRQRRPRLDDAWMNTMLALIGECLEDDD---DLSGAVVSVRKTQDRIAVWTQTATNEQLQRKVGGNFRKVLDLSKNEVLKYQSHADAAASGSSYQNDVVYDA 228          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig875.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDC6_ECTSI6.060e-10578.01Eukaryotic initiation factor 4E n=2 Tax=Ectocarpus... [more]
A0A1V9YGZ3_9STRA2.160e-6153.48Eukaryotic initiation factor 4E n=1 Tax=Achlya hyp... [more]
A0A836CHN5_9STRA4.850e-6048.79Translation initiation factor eIF 4e-like domain-c... [more]
A0A067CRQ2_SAPPC1.380e-5951.32Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485L311_9STRA7.650e-5949.73Aste57867_15132 protein n=1 Tax=Aphanomyces stella... [more]
A0A6U3SLU4_9STRA1.160e-5850.26Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID... [more]
A0A6G0X5M7_9STRA4.490e-5749.20Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S2JX99_9STRA2.180e-5649.46Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
W4G8U0_9STRA4.150e-5648.95Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A024UKG8_9STRA2.370e-5548.66Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001040Translation Initiation factor eIF- 4ePFAMPF01652IF4Ecoord: 16..177
e-value: 1.9E-50
score: 170.8
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 10..193
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10RNA Cap, Translation Initiation Factor Eif4ecoord: 5..194
e-value: 9.5E-61
score: 206.7
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 13..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig875contigA-nodosum_M_contig875:247870..250912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig875.27.1mRNA_A-nodosum_M_contig875.27.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig875 237884..251570 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig875.27.1 ID=prot_A-nodosum_M_contig875.27.1|Name=mRNA_A-nodosum_M_contig875.27.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=200bp
MAGEGGATSGEGAQHPLQHRWALWYDNSKLKAATETWEENLKHIMAFDTV
EDFWALFNNVKPPSMLTMNSNYSVFKEGVKPMWEDNTNCQGGKSVLTLKG
EDMGQLDQWWLRAVLAAIGEILEDPDSEPEVCGLVVSLRKNQHRIALWTK
TCEQSRVVPACKKLKEALKLPARLKLSFQTHSEAAKSQSSFQNSAQFEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001040TIF_eIF_4E
IPR023398TIF_eIF4e-like