prot_A-nodosum_M_contig875.26.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig875.26.2
Unique Nameprot_A-nodosum_M_contig875.26.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length450
Homology
BLAST of mRNA_A-nodosum_M_contig875.26.2 vs. uniprot
Match: D8LDC7_ECTSI (Plastid lipid associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC7_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 8.230e-86
Identity = 145/208 (69.71%), Postives = 177/208 (85.10%), Query Frame = 0
Query:  147 DSDTRSSLKRKLLRKVATLNRGFIAKEADRVDIEEIVEMLELENPNPGACADFGTQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQRIESDGRSIQNIIELQPPFAAVTNRILGNSVATLTVKLETEPVTDTRINLKFVRTEIKANSLFGRNLDLPSLGVDIPSSDKLRRVLNRG----------KAKVEDSKKKARDLTXXAK 344
            D+ TR++LK+KLLRKVATLNRGF+A+E DR+D+EEI+EMLE+ENPNP +C  F T SSP+AGRWQLLYT+SLDVLSLQ+NP +T+G+IFQ+IESDGRSIQNIIELQPPFAAV N+ILG+S+ TLTVKLETEPV+D+RINLKFVRTEIKANSLFGR LDLP+LGVDIPS+++L +++ +G          K KVE +K KAR L    K
Sbjct:  140 DAATRAALKQKLLRKVATLNRGFVAEELDRLDVEEIIEMLEMENPNPKSCEGFETGSSPLAGRWQLLYTTSLDVLSLQINPAVTVGKIFQQIESDGRSIQNIIELQPPFAAV-NKILGSSMTTLTVKLETEPVSDSRINLKFVRTEIKANSLFGRELDLPTLGVDIPSAERLEKLIPKGGGSSGGGKALKEKVEGAKTKARQLAEKLK 346          
BLAST of mRNA_A-nodosum_M_contig875.26.2 vs. uniprot
Match: A0A6H5K952_9PHAE (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K952_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 1.390e-77
Identity = 144/250 (57.60%), Postives = 176/250 (70.40%), Query Frame = 0
Query:  147 DSDTRSSLKRKLLRKVATLNRGFIAKEADRVDIEEIVEMLELENPNPGACADFGTQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQRIESDGRSIQNIIELQPPFAAVTNRILGNSVATLT------------------------------------------VKLETEPVTDTRINLKFVRTEIKANSLFGRNLDLPSLGVDIPSSDKLRRVLNRG----------KAKVEDSKKKARDLTXXAK 344
            D  TR++LK+KLLRKVATLNRGF+A+E+DR+D+EEI+EMLE+ENPNP +C  F T SSP+AGRWQLLYT+SLDVLSLQ+NP +T+G+IFQ+IESDGRSIQNIIELQPPFAAV N+ILG+S+ TLT                                          VKLETEPV+D+RINLKFVRTEIKANSLFGR LDLP+LGV+IPS + L +++ +G          K K ED+K KAR+L    K
Sbjct:   64 DPATRAALKQKLLRKVATLNRGFVAEESDRLDVEEIIEMLEMENPNPKSCEGFETGSSPLAGRWQLLYTTSLDVLSLQINPAVTVGKIFQQIESDGRSIQNIIELQPPFAAV-NKILGSSMTTLTARTTFSFCAIFCVVERCTPSGVRLACDHGRRPRQLDQYGHEKVKLETEPVSDSRINLKFVRTEIKANSLFGRELDLPTLGVNIPSVESLEKLIPKGGGSSGGGKALKEKAEDAKTKARELVEKLK 312          
BLAST of mRNA_A-nodosum_M_contig875.26.2 vs. uniprot
Match: R7Q658_CHOCR (PAP_fibrillin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q658_CHOCR)

HSP 1 Score: 98.6 bits (244), Expect = 1.810e-19
Identity = 66/170 (38.82%), Postives = 96/170 (56.47%), Query Frame = 0
Query:  147 DSDTR----SSLKRKLLRKVATLNRGFIAKEADRVDIEEIVEMLELENPNPGACADFGTQSSPIAGRWQLLYTSSLDVLSLQL-NPTITIGQIFQRIES---DGRS-----IQNIIELQPPFAAVTNRILGNSVATLTVKLETEPVTDTRINLKFVRTEIKANSLFGRNL 303
            D+ TR    S LK  L   V++ NRG  A   DR +I  +V  LE   P P A AD       + GRW+LL+T++LDVLSL L  P   +GQIFQ I     +G+      I+N+++L+P FA V+N + G S+ ++TV  E    +D+R+++ FV+  IK   +FG  L
Sbjct:   77 DAQTRAVPISDLKCSLYAAVSSTNRGLTASADDRANILSLVAELERAKP-PTAPAD---DPGMLCGRWRLLFTNALDVLSLGLLAPVAQVGQIFQNIYEVPLEGKGDYDYDIENVVQLEPAFAPVSNVLGGQSITSITVSAEGRKTSDSRVDITFVQNAIKQEKIFGMQL 242          
BLAST of mRNA_A-nodosum_M_contig875.26.2 vs. uniprot
Match: A0A5J4YK43_PORPP (Plastid lipid-associated protein 1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YK43_PORPP)

HSP 1 Score: 81.3 bits (199), Expect = 4.700e-13
Identity = 59/169 (34.91%), Postives = 88/169 (52.07%), Query Frame = 0
Query:  154 LKRKLLRKVATLNRGFIAKEADRVDIEEIVEMLELENPNPGACADFGTQSSPIAGRWQLLYTSSLDVLSLQL-NPTITIGQIFQRIESDGRSIQ------NIIELQPPFAAVTNRI-LGNSVATLTVKLETE--PVTDTRINLKFVRTEIKANSLFGRNLDLPSLGVDI 312
            LK++ +   A  NRGF A  A +  I +++E LE  + +     D     +   G W L+YT+SLDVLSL L  P   +G+IFQ +E      Q      NI+EL+PPF  V + + LG + + L V+ E       D  +NL+F+R+ + A S+ G  L LP L   +
Sbjct:   90 LKQRFVLATADTNRGFAADAARQKVIMQMIEELEARSTSATPLDD-----ALFLGEWSLIYTNSLDVLSLGLLAPVAGLGRIFQNVERAATGAQHEFDIFNIVELEPPFQVVLSPLGLGPTRSVLRVEAEGSRGDQDDQLLNLRFMRSNLTAASIAGMKLQLPKLSASL 253          
BLAST of mRNA_A-nodosum_M_contig875.26.2 vs. uniprot
Match: UPI001FF0EE99 (PAP/fibrillin family protein n=1 Tax=Synechococcus sp. C9 TaxID=102119 RepID=UPI001FF0EE99)

HSP 1 Score: 75.1 bits (183), Expect = 4.670e-12
Identity = 48/145 (33.10%), Postives = 74/145 (51.03%), Query Frame = 0
Query:  155 KRKLLRKVATLNRGFIAKEADRVDIEEIVEMLELENPNPGACADFGTQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQRIESDGRSIQNIIELQP-PFAAVTNRILGNSVATLTVKLETEPVTDTRINLKFVRTEIKANSL 298
            K KLL+ VA  NRG +A    + ++++++  LE  NP P            ++G WQLLYT+S+DV+ L   P +T+GQI+Q I++D   + N+ E Q  PF              L VK   E V  +RI + F ++ +    L
Sbjct:    4 KIKLLKAVAVTNRGLLASPRSQAELDQLIRQLEAHNPTPNPAQ----APELLSGCWQLLYTTSVDVIGLGRVPGVTLGQIYQVIQADKNRVYNLAEAQGIPFLE----------GLLAVKARFEVVNPSRIAIYFEQSMLALQRL 134          
BLAST of mRNA_A-nodosum_M_contig875.26.2 vs. uniprot
Match: A0A1J0AEG1_9CYAN (PAP fibrillin family protein n=1 Tax=Gloeomargarita lithophora Alchichica-D10 TaxID=1188229 RepID=A0A1J0AEG1_9CYAN)

HSP 1 Score: 69.3 bits (168), Expect = 4.660e-10
Identity = 36/100 (36.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query:  155 KRKLLRKVATLNRGFIAKEADRVDIEEIVEMLELENP--NPGACADFGTQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQRIESDGRSIQNIIELQ 252
            K KLL+ VA  NRG +     + ++++++  LE  NP  NP    +       + G WQLLYT+S+DVL L   P +T+GQ++Q I+++   + N+ E Q
Sbjct:    4 KLKLLKAVAVTNRGLLTSPRVQAELDQLIRQLEAHNPTLNPAQAPEL------LGGCWQLLYTTSVDVLGLGRVPGVTLGQVYQIIQAEKGRVYNLAEAQ 97          
BLAST of mRNA_A-nodosum_M_contig875.26.2 vs. uniprot
Match: A0A6P0NE78_9CYAN (Fibrillin n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0NE78_9CYAN)

HSP 1 Score: 69.3 bits (168), Expect = 4.750e-10
Identity = 45/138 (32.61%), Postives = 73/138 (52.90%), Query Frame = 0
Query:  155 KRKLLRKVATLNRGFIAKEADRVDIEEIVEMLELENP--NPGACADFGTQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQRIESDGRSIQNIIELQPPFAAVTNRILGNSVATLTVKLETEPVTDTRINLKFVR 290
            K  LL  +A  NRG +A +  + DI   V  LE +NP  NP  CAD       + G WQLLYT+S ++L +   P +++G I+Q +  D + I N+ E++   A + +         +T K E   V++ R++++F R
Sbjct:    4 KTDLLNAIAPTNRGLLANDVQKEDILAQVTRLETKNPTPNPLECADL------LNGNWQLLYTTSSELLGIDRVPLLSLGNIYQCVRLDQQRIYNLAEIRSAIAGLVS---------VTAKFEV--VSNRRVDVRFDR 124          
BLAST of mRNA_A-nodosum_M_contig875.26.2 vs. uniprot
Match: UPI001A00F769 (PAP/fibrillin family protein n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI001A00F769)

HSP 1 Score: 68.6 bits (166), Expect = 9.260e-10
Identity = 49/148 (33.11%), Postives = 75/148 (50.68%), Query Frame = 0
Query:  153 SLKRKLLRKVATLNRGFIAKEADRVDIEEIVEMLELENPNPGACADFGTQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQRIESDGRSIQNIIE-LQPPFAAVTNRILGNSVATLTVKLETEPVTDTRINLKFVRTEIKANSLF 299
            S K +LL  +A  NRG +A E D V +   ++ LE  NP P     F  +   + G W+LLYT+S  +L L   P   +GQI+Q I +   ++ NI E +  PF           + ++  K E  PV+++R+N+KF R+ I     F
Sbjct:    2 SKKAELLEAIAGTNRGLLATEIDNVRVLSAIQQLEDYNPTP---KPFEAKEL-LEGNWRLLYTTSKGILGLDRFPLFKLGQIYQCIRTAEATLYNIAEVIGLPFL--------EGIVSVVAKFE--PVSESRVNVKFERSIIGLQRFF 135          
BLAST of mRNA_A-nodosum_M_contig875.26.2 vs. uniprot
Match: A0A7S0G8T1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G8T1_9RHOD)

HSP 1 Score: 68.9 bits (167), Expect = 1.080e-9
Identity = 57/178 (32.02%), Postives = 83/178 (46.63%), Query Frame = 0
Query:  150 TRSSLKRKLLRKVATLNRGFIAKEADRVDIEEIVEMLELENPNPGACADFGTQSSPIAGRWQLLYTSSL-----DVLSLQLNPTITIGQIFQRIESDGRSIQNIIELQP-PFAAVTNRILGNSVATLTVKLETEPVTDTRINLKFVRTEIKANSLFGRNLDLPSLGVDIPSSDKLRRV 321
            +RS L  +LL   A  NRG  A    +  IE+IV +LE +NPNP        ++  I GRW L+Y S+       +L+   +P I +GQ+ Q I  +   + N I++   P  A           TL   L   PV   R+ +   +  IK  S F R  DL +L +DIP  +  +RV
Sbjct:   29 SRSDLTTQLLEICAVTNRGQTASAEQKSLIEDIVALLEADNPNPAP-----VETDAIDGRWNLIYLSTPFYKANPLLATTASPFIEVGQVRQTISMETGELINEIDITAFPMLA----------GTLVTNLRLTPVGAERLEVALEKATIKGGSAFER-FDLGALKLDIPVEEIYQRV 190          
BLAST of mRNA_A-nodosum_M_contig875.26.2 vs. uniprot
Match: K9F3U6_9CYAN (PAP_fibrillin n=4 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9F3U6_9CYAN)

HSP 1 Score: 66.6 bits (161), Expect = 4.260e-9
Identity = 45/147 (30.61%), Postives = 74/147 (50.34%), Query Frame = 0
Query:  155 KRKLLRKVATLNRGFIAKEADR-VDIEEIVEMLELENPNPGACADFGTQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQRIESDGRSIQNIIELQPPFAAVTNRILGNSVATLTVKLETEPVTDTRINLKFVRTEIKANSLFG 300
            K  LL  +A  NRG +A + ++  DI + V  LE  NP P   +     +  + G WQLLYT+S ++L +   P + +G I+Q ++ +   I N+ E++         +LG  V+   V    EPV++ R+N++F R      S  G
Sbjct:    6 KTDLLDAIAPTNRGLLADDPEQQADILKKVARLEASNPTPNPLS----ATDLLNGNWQLLYTTSTELLGIDRFPLLALGNIYQWVQMEQMRIYNLAEIRS--------VLGGLVS---VTATFEPVSEKRVNVRFDRAIFGLQSTLG 137          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig875.26.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDC7_ECTSI8.230e-8669.71Plastid lipid associated protein n=1 Tax=Ectocarpu... [more]
A0A6H5K952_9PHAE1.390e-7757.60PAP_fibrillin domain-containing protein n=1 Tax=Ec... [more]
R7Q658_CHOCR1.810e-1938.82PAP_fibrillin domain-containing protein n=1 Tax=Ch... [more]
A0A5J4YK43_PORPP4.700e-1334.91Plastid lipid-associated protein 1, chloroplastic ... [more]
UPI001FF0EE994.670e-1233.10PAP/fibrillin family protein n=1 Tax=Synechococcus... [more]
A0A1J0AEG1_9CYAN4.660e-1036.00PAP fibrillin family protein n=1 Tax=Gloeomargarit... [more]
A0A6P0NE78_9CYAN4.750e-1032.61Fibrillin n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842... [more]
UPI001A00F7699.260e-1033.11PAP/fibrillin family protein n=1 Tax=Pleurocapsale... [more]
A0A7S0G8T1_9RHOD1.080e-932.02Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
K9F3U6_9CYAN4.260e-930.61PAP_fibrillin n=4 Tax=Leptolyngbyaceae TaxID=18904... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 322..349
NoneNo IPR availableCOILSCoilCoilcoord: 364..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..450
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 153..318
e-value: 7.1E-23
score: 81.6
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 79..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig875contigA-nodosum_M_contig875:227331..231885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig875.26.2mRNA_A-nodosum_M_contig875.26.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig875 227330..231885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig875.26.2 ID=prot_A-nodosum_M_contig875.26.2|Name=mRNA_A-nodosum_M_contig875.26.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=450bp
AFVLPQSSCLRAPLGPGTAGSFASTETTAMSPTRGLASNHLRREGFHRGW
GFPNESRQRQRSTVMGALEGMRRSPRERSLAPRRSTVGSSSSDSFSDAVP
ANVVYPVADDPRLADGGGGSGGGGGGSGGGGGDEGGAVGKTGGGGGDSDT
RSSLKRKLLRKVATLNRGFIAKEADRVDIEEIVEMLELENPNPGACADFG
TQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQRIESDGRSIQNIIE
LQPPFAAVTNRILGNSVATLTVKLETEPVTDTRINLKFVRTEIKANSLFG
RNLDLPSLGVDIPSSDKLRRVLNRGKAKVEDSKKKARDLTKKAKDAAEDA
GVDLPSRDDLRGALEKGKEAVEDSKEMARDLTERAKDAADEAKQVDVVGV
LKDSSKGEIDSGVGESSGDKDARLPKSPPPMAYPSVSPPASATSNLRPPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP