prot_A-nodosum_M_contig875.17.18 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig875.17.18
Unique Nameprot_A-nodosum_M_contig875.17.18
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length907
Homology
BLAST of mRNA_A-nodosum_M_contig875.17.18 vs. uniprot
Match: D8LDC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC8_ECTSI)

HSP 1 Score: 685 bits (1767), Expect = 4.670e-234
Identity = 368/725 (50.76%), Postives = 488/725 (67.31%), Query Frame = 0
Query:   10 KAATALGLLVVVLVPLLTEASIFDTPANEIGEDDYNAYAYEVLWTSMGLGIGLSLFFGFVAXXXXXXXXXXXXXLHREDLAIAQAEANNDGKGLDDMYEIEDYENRISKHRKILWIVSFIILLGYLFCAGFAYSGAKTSKATFDDIFDGTDVLLTNVQTALCAENGVKECADRSVGDFLLNIAHEVVDQFEKIVIFLSSLSTVVSPLYWVSANLTTAATVIDGTERAALNLNTSITNVNLIFTGDGNIADIAGGSTLPTLDDNILEDVAEGKRAITAARTLTVDSILEVTDQLSGPSSSITRIKYQLDDVHGNEIGGDEDLRNTTLEGVYEASV-PLRDATRDIYDFQNNELVHAREAVDKFLELSVQAIGAIIFLPVVVLFLTAICSGICQSSKPLYLNMSFVFLSQILFCLVAGVFLAVSKINGDVCDHHLQLIEINFQQEYSTTVKDTVITFNYDKLYLILTCDGVSGDTPTSTNNFVGILGAEQACRVFNMSEMLKTSSKLITDNADVLASPKSTVVQAQGELSPLNDFVDMEIGDDKEIEESSDKIDNLLNEIPPTPFNWDSRADQDVLDNFYLGNVTEFSWNNDTTGDQLYRSLLEEINKIISEMEPGVIG-QPGFDDIEESYNFTLARNLTWTTVCAETSNFFPDPADPLSSKLLNITIYSDEDQWGYLCGNVSVYANITVKLEDLISENDETRLDLEEVSGHLDDIGGNLNAINGYQ 732
            + A  L L  + +  ++T+ S+FDTPA+++ ++DY  Y  EV   + GLGIGLS+FFG +A             LHR DLAIA+AE +NDGKGLDDMYEIEDYE+ ISKHRKILW+ SFII LGYLFCAG+AY+GA+T+ ++F  IFDGTDVLLT  Q ALCAENG  +CAD SVGDF+L I+  ++D+ E +V F+SSLS V +PL  VSANL TA  V+D TE A +N+N SIT+VN I TGDG +A++  G T+  +D ++L D+ +G+ A+  A  LT  S LE+ +QL+G  S+ITRIKYQLDDVHGNEI GDED+RN TL  V +  + P+RD T DIYD QN+++   RE ++ +L+ +VQA+  IIFLP V+LFLT++CSG+CQSSK                            INGD+CDHH+ LIE N   E++TTV+D  I  ++ K+  ILTC G +GDTPT +NNFV IL  +Q   +FN+S  LK +S LITDN+ +LA PK +V+ AQ EL PL+DFV+ +   D ++ E SD+ID+LL ++PP+P +WD R  QD +D+FYL NV+ +SWNN ++G+  YR  LE +N +IS M PG+IG +  F DI++ YNF  ARNLT  TVCA  S F+P       S   NI IY+ +D W  LC NV+ Y   T KLE LI ENDE R DLE +   + +I GN+  I   Q
Sbjct:   13 RGAAMLCLPTLAMTLVVTKGSVFDTPADDLEQEDYIDYGQEVGVATAGLGIGLSIFFGLLAFLGMLAMCCRCKRLHRADLAIAEAEGDNDGKGLDDMYEIEDYEDNISKHRKILWLFSFIIFLGYLFCAGYAYNGAETTDSSFGSIFDGTDVLLTRAQEALCAENGSADCADGSVGDFMLEISVALIDRLEGVVDFISSLSAVTAPLLVVSANLGTATGVVDTTEMAVININNSITSVNAIITGDGPVAELMDGETIANIDGDVLHDIQDGRDALEQATELTESSSLEIAEQLTGNESAITRIKYQLDDVHGNEILGDEDIRNATLTTVLDDVLQPMRDLTVDIYDVQNDDIPEVRENIEVYLDQAVQAVAGIIFLPGVILFLTSLCSGVCQSSK----------------------------INGDLCDHHMALIEANLP-EFNTTVQDVEILVDFPKVEKILTCSGDAGDTPTDSNNFVDILEIQQ---IFNISSTLKEASSLITDNSALLAEPKDSVLDAQSELGPLDDFVETDFVGDIDMSELSDEIDDLLEDMPPSPLDWDDRDHQDSVDSFYLNNVSGYSWNNASSGNITYRGQLENVNWLISLMVPGIIGVEDAFLDIKDPYNFEQARNLTNETVCATDSPFYPADGQDRYSNSENIEIYAFDDHWDQLCRNVTAYYETTKKLETLIEENDEARQDLEGIQYEMGNIEGNITVITDQQ 705          
BLAST of mRNA_A-nodosum_M_contig875.17.18 vs. uniprot
Match: A0A836CLF9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLF9_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.850e-34
Identity = 110/413 (26.63%), Postives = 181/413 (43.83%), Query Frame = 0
Query:   37 NEIGEDDYNAYAYEVLWTSMGLGIGLSLFFGFVAXXXXXXXXXXXXXLHREDLAIAQAEANNDGKGLDDMYEIEDYENRISKHRKILWIVSFIILLGYLFCAGFAYSGAKTSKATFDDIFDGTDVLLTNVQTALCAENGVKECADRSVGDFLLNIAHEVVDQFEKIVIFLSSLSTVVSPLYWVSANLTTAATVIDGTERAALNLNTSITNVNLIFTGDGNIADIAGGSTLPTLDDNILEDVAEGKRAITAARTLTVDSILEVTDQLSGP-SSSITRIKYQLDDVHGNEIGGDEDLRNTTLEGVYEASVPLRDATRDIYDFQNNELVHAREAVDKFLELSVQAIGAIIFLPVVVLFLTAICSGICQSSKPLYLNMSFVFLSQILFCLVAGVFLAVSKINGDVCDHHLQLIEINF 448
            N    + + AY   V   + G GI L    G +              L R D  I +      GKG  D   I     R++K RK+LW+ + ++++GY  CAG AY  A ++   F + +DG D    ++Q A+CA++G +EC D+S+G FL                           +Y  +  +        GT    +  NT++    ++                    +    D+        A+              + GP  +S T +  ++D  HGNE+ G  DLR      +      LR+ TR IY +Q    V   +A +++++ +  A G I+FLP +VL L A C+ +C++ +PLYLNM+FV+  Q  +CL+ G+FL ++ +N D+CD H ++I   F
Sbjct:   22 NSTQMEQWKAYGATVSEHTAGFGIALMFVLGLLMSILAIVFCCRCRSLRRIDREIGE------GKGFHDQAAIA---YRVTKQRKLLWVGTVMLVVGYAACAGVAYEKALSTDVAFGNAYDGADKFALDLQKAVCAQDGARECEDKSLGAFL-------------------------EAVYGATTAVLNGTAAFLGTAGITMTSNTTL--YGMLTCTPXXXXXXXXXXXXRWQSEGRPRDIERY-----ASXXXXXXXXXXXXXAMQGPLGASATFVASEIDAEHGNEVDGVPDLREGVTVVLDATLTQLRNFTRTIYKYQTGAAVDVDDAFNQWIKPAAAAAGGIVFLPGIVLVLLAFCTAMCKNPRPLYLNMAFVYKVQGFYCLLGGLFLTLAYVNSDLCDQHKEIIVEQF 393          
BLAST of mRNA_A-nodosum_M_contig875.17.18 vs. uniprot
Match: D8LDC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC9_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 8.210e-13
Identity = 45/88 (51.14%), Postives = 48/88 (54.55%), Query Frame = 0
Query:  820 MFISFCVQGCYGPSMRKRPRHTA-DPDGSKVTPTAIAAGETRELNEVSGDKTDLGIVVDEETALNITADENNLPTPHSPTPLVGDSGF 906
            MF+SFC+QGCYGPSMRKRPR  A D DG K                                 LN TAD NNLPTPHSPTPLVG+SGF
Sbjct:    1 MFLSFCIQGCYGPSMRKRPRGPAGDFDGGKAR-------------------------------LNDTAD-NNLPTPHSPTPLVGNSGF 56          
BLAST of mRNA_A-nodosum_M_contig875.17.18 vs. uniprot
Match: A0A835ZCZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCZ2_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 6.320e-10
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 0
Query:  763 LAKEIESLNDHLMAASSYTMCGYIGTFYEDVYLDAMCTDLQGNVKAVAGPALCIVILMFISFCVQGCYGPSMRKRP 838
            LA  I ++N   M A +Y+MCG+IG FY+ VYL A+C   QGN++ +A P L +  LM ++F +     P+MR RP
Sbjct:   71 LAASIVAVNGVFMKADAYSMCGFIGDFYQSVYLGAVCEGFQGNLRDIAVPILFVACLMLVAFVLYAWLAPAMRARP 146          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig875.17.18 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LDC8_ECTSI4.670e-23450.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CLF9_9STRA2.850e-3426.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LDC9_ECTSI8.210e-1351.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZCZ2_9STRA6.320e-1043.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig875contigA-nodosum_M_contig875:178869..214828 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig875.17.18mRNA_A-nodosum_M_contig875.17.18Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig875 177412..216547 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig875.17.18 ID=prot_A-nodosum_M_contig875.17.18|Name=mRNA_A-nodosum_M_contig875.17.18|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=907bp
MLQRRGMDCKAATALGLLVVVLVPLLTEASIFDTPANEIGEDDYNAYAYE
VLWTSMGLGIGLSLFFGFVAFIAMLCMCCRCNRLHREDLAIAQAEANNDG
KGLDDMYEIEDYENRISKHRKILWIVSFIILLGYLFCAGFAYSGAKTSKA
TFDDIFDGTDVLLTNVQTALCAENGVKECADRSVGDFLLNIAHEVVDQFE
KIVIFLSSLSTVVSPLYWVSANLTTAATVIDGTERAALNLNTSITNVNLI
FTGDGNIADIAGGSTLPTLDDNILEDVAEGKRAITAARTLTVDSILEVTD
QLSGPSSSITRIKYQLDDVHGNEIGGDEDLRNTTLEGVYEASVPLRDATR
DIYDFQNNELVHAREAVDKFLELSVQAIGAIIFLPVVVLFLTAICSGICQ
SSKPLYLNMSFVFLSQILFCLVAGVFLAVSKINGDVCDHHLQLIEINFQQ
EYSTTVKDTVITFNYDKLYLILTCDGVSGDTPTSTNNFVGILGAEQACRV
FNMSEMLKTSSKLITDNADVLASPKSTVVQAQGELSPLNDFVDMEIGDDK
EIEESSDKIDNLLNEIPPTPFNWDSRADQDVLDNFYLGNVTEFSWNNDTT
GDQLYRSLLEEINKIISEMEPGVIGQPGFDDIEESYNFTLARNLTWTTVC
AETSNFFPDPADPLSSKLLNITIYSDEDQWGYLCGNVSVYANITVKLEDL
ISENDETRLDLEEVSGHLDDIGGNLNAINGYQVQMGLLRDDMDDSLIHLI
EKLDLLGGDLYDLAKEIESLNDHLMAASSYTMCGYIGTFYEDVYLDAMCT
DLQGNVKAVAGPALCIVILMFISFCVQGCYGPSMRKRPRHTADPDGSKVT
PTAIAAGETRELNEVSGDKTDLGIVVDEETALNITADENNLPTPHSPTPL
VGDSGF*
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