prot_A-nodosum_M_contig875.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig875.14.1
Unique Nameprot_A-nodosum_M_contig875.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length882
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig875.14.1 vs. uniprot
Match: D8LDD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDD7_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.040e-55
Identity = 108/158 (68.35%), Postives = 123/158 (77.85%), Query Frame = 0 
Query:  685 EEETVDDSGLKELLHTGRRDGYLDLRRYRKPGWPRPLRVTRVEASHGKRFEEHLLRLLKEDRRVEATVFLRRLAHFDRHPPHLVAVAENGGRGRWAASVPLWYQEVA--------GVGGG---VEELVDLTLGEAEVVECLDNEPLDCVVMDVVKKEP 831
            EEETVDD GL+ LLHT RRDG+LDLRRYRKPGWPRPLR+TR+EASHGKRFEEHLL LLK+ RR EA VFLRRLAH+DR+PPHL A    G RG  AA +P WYQE++        G  GG   +EE+VDLT   AEVVEC DNEPLDCV+M +VK+EP
Sbjct:  133 EEETVDDEGLEGLLHTARRDGFLDLRRYRKPGWPRPLRITRLEASHGKRFEEHLLVLLKQRRRREANVFLRRLAHYDRNPPHLAASLLAGRRGH-AACIPAWYQELSTAARPAHEGSDGGCDTIEEMVDLTEKRAEVVECYDNEPLDCVMMRIVKQEP 289
[Close]
BLAST of mRNA_A-nodosum_M_contig875.14.1 vs. uniprot
Match: A0A6H5K6L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L5_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 1.440e-54
Identity = 112/165 (67.88%), Postives = 128/165 (77.58%), Query Frame = 0 
Query:  678 LAPYDRIEEETVDDSGLKELLHTGRRDGYLDLRRYRKPGWPRPLRVTRVEASHGKRFEEHLLRLLKEDRRVEATVFLRRLAHFDRHPPHLVAVAENGGRGRWAASVPLWYQEVA--------GVGGG---VEELVDLTLGEAEVVECLDNEPLDCVVMDVVKKEP 831
            LAPY RIEEETVDD GL+ELLHT RRDG+LDLRRYRKPGWPRPLR+TR+EASHGKRFEEHLL LLK+ RR EA VFLRRL H+DR+PPHL A  + G RG  AA +P WYQ ++        G   G   +EE+VDLT   AEVVEC DNEPLDCV+M +VK+EP
Sbjct:  885 LAPYARIEEETVDDEGLEELLHTARRDGFLDLRRYRKPGWPRPLRITRLEASHGKRFEEHLLLLLKQRRRREANVFLRRLVHYDRNPPHLAASLQAGRRGH-AACIPAWYQVLSTAARPAHEGTDDGCDTIEEIVDLTEKRAEVVECYDNEPLDCVMMRIVKQEP 1048
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig875.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDD7_ECTSI1.040e-5568.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6L5_9PHAE1.440e-5467.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..334
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 586..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..677
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 471..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig875contigA-nodosum_M_contig875:157623..164019 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig875.14.1mRNA_A-nodosum_M_contig875.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig875 157459..165094 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig875.14.1 ID=prot_A-nodosum_M_contig875.14.1|Name=mRNA_A-nodosum_M_contig875.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=882bp
MQVKEATVKPTRGWLSLVNEIFWRPPRSVATSDDPPISQQRSSFFPFLRH
VIGDEEKAVRATLEIPSAGHGRDTSNGNSKPSFSEGDEDASRAPATPTTP
RSCNVSVEATAEHADSNNRNSDACGGRGPGGSGSGEVRRGLSRRRTRASS
VSKVKEERSLQKDLPFIWTFLKDAEGWDFVGNSWDVRPPRVEETSTSLVG
GWERRTLAQEQLSAFLVEHPELLKRYRQWRERMFRENRACVDGVRGSNRS
TPRESDRSPSGVGSSRRRASPSPSTHTPAPTPQLLPQPMKSLPPAAPDEE
KKKVRGWQQQREPSGIGPLNSRTTSVSRTTPISASKGPRGRYGSDSPLRS
EPSGIGSLNSRTTSVSRTTPISASKGPRGRYSSYSPLRSGSPALRTRSRS
ACVLASRCTSEQSVCLEGGLEAGRVKPTSVRESPVILISASGRGQIGVDG
GGDRSIRTPLPTGRGRVGVSRGRVKKPEDSSERQLKHVQRELRSGGKKRK
APVVEVGRDCASPDPRAAATPAAASGAGRSSARQRAGGFVGGVRAKRRWC
DVRRIKDHDNVRHDVNRTSNQDADPQQVHVEVACVQPPPSNGETPKVKTE
CEDQSSPLPSEAAATSKTSRLSCKKGMSLGGTPRPARRTIWERNTPRTPD
RASARQAGAEGREDTDGGWGGGIGSDPLAPYDRIEEETVDDSGLKELLHT
GRRDGYLDLRRYRKPGWPRPLRVTRVEASHGKRFEEHLLRLLKEDRRVEA
TVFLRRLAHFDRHPPHLVAVAENGGRGRWAASVPLWYQEVAGVGGGVEEL
VDLTLGEAEVVECLDNEPLDCVVMDVVKKEPEPCFAEIAGGIKGREPDRD
DDVEPAGGGADQVTSSVGVGIAVLPVKTEVQ*
back to top