prot_A-nodosum_M_contig874.30.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig874.30.1
Unique Nameprot_A-nodosum_M_contig874.30.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length246
Homology
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BLAST of mRNA_A-nodosum_M_contig874.30.1 vs. uniprot
Match: D8LGY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY2_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 4.660e-22
Identity = 82/207 (39.61%), Postives = 103/207 (49.76%), Query Frame = 0 
Query:   69 YAYVGVPVDHPDGGIPPPPDARIGELGLSR------------GVGDDVAGANRAAKIRARRDA----EEMRFTNAQARARVEEERRALDVARINAKIRDSEGLDMRPHPGNRFKPEP---------EYGSIGLR---------GEKASSFGGARGGARGSSEDNQGEEGAGKDTGKERAYSVGGYQVAEXXXXXXVVSQYKSVYDTP 241
            +AYVGVP+D  +      P         SR            GVG D  GA  AAK  ARRD     E+ RFT AQA++RVEE+ RA++ ARINAK RD+EGLDMRPHPGNR +PE          +YG+ G           G++A++ G               E  AGK  G E+  S GGYQ +E       +  YKSVY+ P
Sbjct:   60 FAYVGVPIDDDNHNELRRPSTAAASYDNSRAGAGRVHGDVSVGVGADYDGAAEAAKASARRDNAAFFEKKRFTEAQAKSRVEEDLRAIETARINAKRRDAEGLDMRPHPGNRLEPEDATPLGEKERDYGAGGXXXXXXXXXXXGKEAAAVGE--------------ESAAGK--GCEQEASGGGYQFSEYVPAEYDIPDYKSVYERP 250
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig874.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGY2_ECTSI4.660e-2239.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig874contigA-nodosum_M_contig874:270712..314120 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig874.30.1mRNA_A-nodosum_M_contig874.30.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig874 270311..314390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig874.30.1 ID=prot_A-nodosum_M_contig874.30.1|Name=mRNA_A-nodosum_M_contig874.30.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=246bp
MEMPNRRGDDTYGEKTPVAQPLLPEETRRSLPTSPQVEDEDEGGQWQEEA
PRVPTGMMVGVPTVVGGRYAYVGVPVDHPDGGIPPPPDARIGELGLSRGV
GDDVAGANRAAKIRARRDAEEMRFTNAQARARVEEERRALDVARINAKIR
DSEGLDMRPHPGNRFKPEPEYGSIGLRGEKASSFGGARGGARGSSEDNQG
EEGAGKDTGKERAYSVGGYQVAEYKPSEYVVSQYKSVYDTPDASK*
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