prot_A-nodosum_M_contig874.29.4 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig874.29.4
Unique Nameprot_A-nodosum_M_contig874.29.4
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length689
Homology
BLAST of mRNA_A-nodosum_M_contig874.29.4 vs. uniprot
Match: A0A6H5KLG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG6_9PHAE)

HSP 1 Score: 450 bits (1158), Expect = 6.920e-146
Identity = 390/739 (52.77%), Postives = 465/739 (62.92%), Query Frame = 0
Query:    6 MPTQVANEDQLSIEQPAPAFIEQGNEDVGSSGDVVVQVVQEEKDREK-----------QSLASGETDGADNGAQIPGQQQQXXXXXSPGQDPESAIKYLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLIAGNTDGVKRACALILHTIHAPDHNISGCAKLLSPELAANVDVSQRMLIPLTAGGLVIGRKGANIAALLEASGAKMTLGQKAEIKANERLVTVQGKLPQAVKAVEMLLEKLREEPVLSRFSNLSVSYRGHGSSTSKAASAAGIAPTAEPYQRGARDSSTVTSSPTPEESASSVLSGVSVAAGVTDVDASTAAATGD---------------------CGSSA-GSPAKSVSSKA-ESPPRLTS--PARAVRGGGYAGQMAGRGMGAGT-GGRFL------QHQQHQXXXXXXXXXXXXXQHQHHQ---------VVXXXXXXXXXXXXXXXXXXXXXXXHFAISP-SRGPPVPHQPHSPXXXXXXXXXXXXXXXXXMMQMTPAGPMVAAPPDHQMGVMTPLGTIVSNPPAMHRMGMAYGPPPAAGAYFSGGMQA-PGVAAAVATGMVARGPDGQQAPRGGYAAPTPMSPPP-------GPPLQAQPQQHQQQVLMTMEAPVTNPIAAAVASCPPTTSVTVGVPNNMIGAILGRGGATIAELQSMSGARINVSQRDELLPGTDSRLLTISGTPMATQAAQYLVSQKIQEIADRRR 683
            MPTQ+A   Q+ ++QP     +Q +++  S+ +V+   VQ                   S A+  TD A  GA+   + +      S  +DP+SAIK+LVPN+ AGSLIGKKGATIKDIQ+K SCMVRIATSGMY+PGTMERAVL+AG T+GVK+AC LILHT+H PD+N SGCAKL+S E A  ++V+QR+LIPLTAGGLVIGR+GANIAALL ASGAK+TLGQKA++K +ERLVTVQGKL  A KAVEML++KL EEPVLSRF+NLSV+YRGHGSS SKAA AAGI P   PYQR  RD ST      P+++AS         AG     A+ AAA                         GSS   SPA S + +   SPPRL+S  P R  RG    G+M GRG G+G  G RF       QHQQ  XXXXXXXXXXXXX HQ ++           XXXXXXXXXXXXXXXXXXXX      +SP S  PP P       XXXXXXXXXXX      + M P GPMV++P   QM  M P+    +  P      M+Y P PA   Y  GGMQA P +   VAT     G DGQ  PRG Y A   M+ PP               Q  +QQ+ M    P+TNP+AAA+ASC PTT+VTVGVPNNMIGAILG GGA I+ELQ++SGARINVSQRD  +PGT++R+LTI+G P ATQ AQYLVSQKI+    R R
Sbjct:    1 MPTQIA---QMEMDQPVELIHQQEDDEQRSNSEVMDVEVQXXXXXXXXXXXXXXXXXPSSPAAVPTDDA--GAESGSESRHDTRQESLAEDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSEEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHGSSHSKAAMAAGIVPAPLPYQRAPRDPST------PQKAASD--------AGTEPDTAAAAAAAASPXXXXXXXXXXXXXXXVTPVMIGSSVTSSPATSATGRRITSPPRLSSSSPRRTARGARGGGRMVGRGFGSGNVGNRFQPQQFRQQHQQXXXXXXXXXXXXXXXXHQFYRQQSGSMQXXXXXXXXXXXXXXXXXXXXXXXXHQQRLPMSPASIAPPTPXX-----XXXXXXXXXXXASMVVSLPMGPGGPMVSSP--MQMAPMGPMSHPSATAPVYT---MSYAPAPAGNLYHQGGMQAAPSMPGPVAT----VGGDGQ--PRG-YPA---MAVPPQXXXXXXXXXXXXXQQLPRQQLGMFPMEPMTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKIEAFVQRPR 700          
BLAST of mRNA_A-nodosum_M_contig874.29.4 vs. uniprot
Match: D8LGY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY3_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 1.290e-87
Identity = 148/206 (71.84%), Postives = 175/206 (84.95%), Query Frame = 0
Query:   64 DNGAQIPGQQQQXXXXXSPGQDPESAIKYLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLIAGNTDGVKRACALILHTIHAPDHNISGCAKLLSPELAANVDVSQRMLIPLTAGGLVIGRKGANIAALLEASGAKMTLGQKAEIKANERLVTVQGKLPQAVKAVEMLLEKLREEPVLSRFSNLSVSYRGH 269
            D GA+   + +      S  QDP+SAIK+LVPN+ AGSLIGKKGATIKDIQ+K SCMV IATSGMY+PGTMERAVL+AG T+GVK+AC LILHT+H PD+N SGCAKL+S E A  ++V+QR+LIPLTAGGLVIGR+GANIAALL ASGAK+TLGQKA++K +ERLVTVQGKL  A KAVEML++KL EEPVLSRF+NLSV+YR H
Sbjct:   61 DAGAESGSESRHDTRQESLAQDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVGIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSQEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRSH 266          
BLAST of mRNA_A-nodosum_M_contig874.29.4 vs. uniprot
Match: A0A836CIW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW2_9STRA)

HSP 1 Score: 158 bits (399), Expect = 5.610e-39
Identity = 85/183 (46.45%), Postives = 125/183 (68.31%), Query Frame = 0
Query:   86 PESAIKYLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLIAGNTDGVKRACALILHTIHAP--DHNISGCAKLLSPELAANVDVSQRMLIPLTAGGLVIGRKGANIAALLEASGAKMTLGQKAEIKANERLVTVQGKLPQAVKAVEMLLEKLREEPVLSRFSNLSVSY 266
            P  A+K LV N +AGSLIGK G TI+++Q+++  +V+++TSGMY PGT +R VL+ G+   VK ACAL+LHT+H    D +    A L        ++V+QR+LIP +AGGLVIGR G+NI  L E+SGA+++L QK    ++ER+VT+ G L      ++MLL+ L+ EP  + ++NLSV+Y
Sbjct:   46 PPCALKLLVSNNMAGSLIGKAGQTIQNVQLQSGAVVKVSTSGMYLPGTQDRVVLVTGDLPRVKAACALVLHTVHEQGRDRDCGVPAPLDIGTERDALEVTQRLLIPASAGGLVIGRGGSNIKGLSESSGARVSLSQKQTSPSSERVVTIGGSLGACRLCIDMLLDTLKREPAAAVYTNLSVNY 228          
BLAST of mRNA_A-nodosum_M_contig874.29.4 vs. uniprot
Match: A0A835ZEM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEM4_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.670e-30
Identity = 80/181 (44.20%), Postives = 115/181 (63.54%), Query Frame = 0
Query:   86 PESAIKYLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLIAGNTDGVKRACALILHTIH--APDHNISGCAKLLSPELAANVDVSQRMLIPLTAGGLVIGRKGANIAALLEASGAKMTLGQKAEIKANERLVTVQGKLPQAVKAVEMLLEKLREEPVLSRFSNLSV 264
            P  AIK LV N +AG LIGK GATI+ +Q +T  +V +++S    PG ++R VLI+G+   VK A AL+LHT+H  A D + +  A L         +++QR+LIP  AGGLVIG +G+ + AL  ASGA+++L  K    + ER++T+ G L      ++MLL+ LR EP +SR+ NLSV
Sbjct:  264 PACAIKLLVSNNMAGGLIGKAGATIQSLQAQTGALVNVSSSACL-PGILDRVVLISGDAAPVKMAVALVLHTVHDHARDRDATEPAPLAIAAALNEQEITQRLLIPAAAGGLVIGWRGSGVQALSSASGARVSLSHKRNPASAERVMTIHGALGACRLCIDMLLDVLRREPAMSRYLNLSV 443          
BLAST of mRNA_A-nodosum_M_contig874.29.4 vs. uniprot
Match: A0A8C4QEJ6_EPTBU (NOVA alternative splicing regulator 1 n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QEJ6_EPTBU)

HSP 1 Score: 118 bits (296), Expect = 2.190e-24
Identity = 147/600 (24.50%), Postives = 237/600 (39.50%), Query Frame = 0
Query:   83 GQDPESAIKYLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLIAGNTDGVKRACALILHTIHA--PDHNISGCAKLLSPELAANVD-VSQ-RMLIPLTAGGLVIGRKGANIAALLEASGAKMTLGQKAEIKA-NERLVTVQGKLPQAVKAVEMLLEKLREEPVLSRFSNLSVSYRGHGSSTSKAASAAGIAPTAEPYQRGARDSSTVTSSPTPEESASSVLSGVSVA--AGVTDVDASTAAATGDCGSSAGSPAKSVSSKAESPPRLTSPARAVRGGGYAGQMAGRGMGAGTGGRFLQHQQHQXXXXXXXXXXXXXQHQHHQVVXXXXXXXXXXXXXXXXXXXXXXXHFAISPSRGPPVPHQPHSPXXXXXXXXXXXXXXXXXMMQMTPAGPMVAAPPDHQMGVMTPLGTIVSNPPAMHRMGMAYGPPPAAGAYFSGGMQAPGVAAAVATGMVARGPDGQQAPRGGYAAPTPMSPPPGPPLQAQPQQHQQQVLMTMEAPVTNPIAAAVASCPPTTSVTVGVPNNMIGAILGRGGATIAELQSMSGARINVSQRDELLPGTDSRLLTISGTPMATQAAQYLVSQKI 675
            G D +  +K L+P+Y AGS+IGK G TI  +Q +T  +++++ S  ++PGT ER  LI G+ + +    + I   I    P+   +    +L P+ A + D + Q ++++P T  GL+IG+ GA + A++E SGA + L QK E  +  ER+ TV G+  QA +AVE++++K++E+P     S L++SY G     + A       PT  PY      S+  T SP        VL G  +   +G+ +V    A  +G  G+   + + ++S+ A                GY   +   G+  G                                                           ++P+   P P                           TPA     +P    +G +T  G  +S+  +           P  G+   GG +  G   A   G   +                                                             + + VP N++GAILG+GG T+ E Q M+GARI +S++ E +PGT +R +TI+G P A QAAQYL+ Q+I
Sbjct:   76 GDDGQYYMKVLIPSYAAGSIIGKGGQTIVQLQKETGAIIKLSKSKDFYPGTTERVALIQGSVEALNGVHSFIAEKIREMPPNGGKTEPVNILQPQTAVSPDRIKQAKIIVPNTTAGLIIGKGGATVKAMMEQSGAWIQLSQKPEGGSLQERVATVSGEAEQACRAVELIIQKIQEDPQSG--SCLNISYAGMTGPVANAN------PTGSPYA-----SAGATVSPV------EVLPGAGILGHSGLANVTTFPAVLSGFGGNDLVAISSALSTLA----------------GYGYSLPAPGLALG-----------------------------------------------------------LTPAAAAPAP-------AIFGSSPTAVASILASYANETPAS---VSPSSFALGGLTTNGGYLSSATS-----------PLVGSTLLGGEKNDGATTATTGGTAGKD-----------------------------------------------------------VLEIAVPENLVGAILGKGGKTLVEYQEMTGARIQISKKGEFVPGTRNRKVTITGPPAAQQAAQYLIMQRI 501          
BLAST of mRNA_A-nodosum_M_contig874.29.4 vs. uniprot
Match: UPI0004BD8A9A (RNA-binding protein Nova-2 n=1 Tax=Equus przewalskii TaxID=9798 RepID=UPI0004BD8A9A)

HSP 1 Score: 114 bits (284), Expect = 4.720e-24
Identity = 67/193 (34.72%), Postives = 114/193 (59.07%), Query Frame = 0
Query:   81 SPGQDPESAIKYLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLIAGNTDGVKRACALILHTIHAPDHNISG--CAKLLSPELAANVDVSQ--RMLIPLTAGGLVIGRKGANIAALLEASGAKMTLGQKAE-IKANERLVTVQGKLPQAVKAVEMLLEKLREEPVLSRFSNLSVSYRG 268
            +PG++ E  +K L+P+Y AGS+IGK G TI  +Q +T   ++++ S  ++PGT ER  L+ G  + +    + I   +      ++      +L P+   N D ++  ++++P +  GL+IG+ GA + A++E SGA + L QK E I   ER+VTV G+  Q  KAV  +++K++E+P  S  S L++SY G
Sbjct:   23 TPGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSS--SCLNISYSG 213          
BLAST of mRNA_A-nodosum_M_contig874.29.4 vs. uniprot
Match: V9LF99_CALMI (Neuro-oncological ventral antigen 1 (Fragment) n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9LF99_CALMI)

HSP 1 Score: 110 bits (275), Expect = 7.020e-24
Identity = 64/177 (36.16%), Postives = 104/177 (58.76%), Query Frame = 0
Query:   83 GQDPESAIKYLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLIAGNTDGVKRACALILHTIHAPDHNISGC--AKLLSPELAANVD-VSQ-RMLIPLTAGGLVIGRKGANIAALLEASGAKMTLGQKAE-IKANERLVTVQGKLPQAVKAVEMLLEKLREEP 254
            G++ E  +K L+P+Y AGS+IGK G TI  +Q +T+  ++++ S  ++PGT ER  LI G  + +      I   +     N+       +L P+   N D V Q ++++P +  GL+IG+ G  + A++E SGA + L QK E I   ER+VTV G+  Q  KAVE++++K++E P
Sbjct:   37 GEEGEFFLKVLIPSYAAGSIIGKGGQTIVQLQKETAATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHDFIAEKVREMPQNVGKAEPVNILQPQTNVNPDRVKQAKLIVPNSTAGLIIGKGGGTVKAVMEHSGAWVQLSQKPEGINLQERVVTVSGESEQNRKAVELIIQKIQEGP 213          
BLAST of mRNA_A-nodosum_M_contig874.29.4 vs. uniprot
Match: V9L9T6_CALMI (RNA-binding protein Nova-1-like protein (Fragment) n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9L9T6_CALMI)

HSP 1 Score: 110 bits (274), Expect = 9.090e-24
Identity = 65/185 (35.14%), Postives = 107/185 (57.84%), Query Frame = 0
Query:   84 QDPESAIKYLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLIAGNTDGVKRACALILHTIHAPDHNISGC--AKLLSPELAANVD-VSQ-RMLIPLTAGGLVIGRKGANIAALLEASGAKMTLGQKAE-IKANERLVTVQGKLPQAVKAVEMLLEKLREEPVLSRFSNLS 263
            ++ E  +K L+P+Y AGS+IGK G TI  +Q +T+  ++++ S  ++PGT ER  LI G  + +      I   +     N+       +L P+   N D V Q ++++P +  GL+IG+ G  + A++E SGA + L QK E I   ER+VTV G+  Q  KAVE++++K++E+P      N+S
Sbjct:    5 EEGEFFLKVLIPSYAAGSIIGKGGQTIVQLQKETAATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHDFIAEKVREMPQNVGKAEPVNILQPQTNVNPDRVKQAKLIVPNSTAGLIIGKGGGTVKAVMEHSGAWVQLSQKPEGINLQERVVTVSGESEQNRKAVELIIQKIQEDPQSGSCLNIS 189          
BLAST of mRNA_A-nodosum_M_contig874.29.4 vs. uniprot
Match: A0A6J0T607_9SAUR (RNA-binding protein Nova-2 isoform X1 n=12 Tax=Sauria TaxID=32561 RepID=A0A6J0T607_9SAUR)

HSP 1 Score: 114 bits (286), Expect = 4.010e-23
Identity = 159/598 (26.59%), Postives = 247/598 (41.30%), Query Frame = 0
Query:   83 GQDPESAIKYLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLIAGNTDGVKRACALILHTIHAPDHNI--SGCAKLLSPELAANVDVSQ--RMLIPLTAGGLVIGRKGANIAALLEASGAKMTLGQKAE-IKANERLVTVQGKLPQAVKAVEMLLEKLREEPVLSRFSNLSVSYRGHGSSTSKAASAAGIAPTAEPYQRGARDSSTVTSSPTPEESASSVLSGVSVAAGVTDVDASTAAATGDCGSSAGSPAKSVSSKAESPPRLTSPARAVRGGGYAGQMAGRGMGAGTGGRFLQHQQHQXXXXXXXXXXXXXQHQHHQVVXXXXXXXXXXXXXXXXXXXXXXXHFAISPSRGPPVPHQPHSPXXXXXXXXXXXXXXXXXMMQMTPAGPMVAAPPDHQMGVMTPLGTIVSNPPAMHRMGMAYGPPPAAGAYFSGGMQAPGVAAAVATGMVARGPDGQQAPRGGYAAPTPMSPPPGPPLQAQPQQHQQQVLMTMEAPVTNPIAAAVASCPPTTSVTVGVPNNMIGAILGRGGATIAELQSMSGARINVSQRDELLPGTDSRLLTISGTPMATQAAQYLVSQKI 675
            G+D E  +K L+P+Y AGS+IGK G TI  +Q +T   ++++ S  ++PGT ER  L+ G  + +      I   +     ++       +L P+   N D ++  ++++P +  GL+IG+ GA + A++E SGA + L QK E I   ER+VT+ G+  Q  KAV+++++K++E+P  S  S L++SY       +     A   PT  PY          ++   P  +A++  SG+     +  V A  AA  G  GS   + + ++++ A                GY     G G+ +      L                                 XXXXXXXXXXXXX     +A   S   P                             TPAG                                      A GA+  G + A   A   A G +            G A+P                      L+      T  +  +         V + VP N++GAILG+GG T+ E Q ++GARI +S++ E +PGT +R +TI+GTP ATQAAQYL+SQ++
Sbjct:   89 GEDGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHNFIAEKVREIPQSVVKPESVNILQPQTTMNPDRAKQAKVIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPEGINLQERVVTISGEPEQIHKAVDIIVQKIQEDPQSS--SCLNISY------ANITGPVANSNPTGSPYAN--------STDVLPAAAAAATASGLLGHTSLAGVGAFPAALPGFSGSDLLAISTALNTLASY--------------GYNTSSLGLGLNSAAASGVLA-------------------------------AXXXXXXXXXXXXXNLLASYANEASASTP-----------------------------TPAG--------------------------------------AVGAFTLGSLAA---ATGAANGYL------------GTASP----------------------LVASSFLATEKLVESAKDM-----VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGTPAATQAAQYLISQRV 516          
BLAST of mRNA_A-nodosum_M_contig874.29.4 vs. uniprot
Match: P51513-5 (Isoform 3 of RNA-binding protein Nova-1 n=171 Tax=Gnathostomata TaxID=7776 RepID=P51513-5)

HSP 1 Score: 114 bits (284), Expect = 4.780e-23
Identity = 66/186 (35.48%), Postives = 109/186 (58.60%), Query Frame = 0
Query:   83 GQDPESAIKYLVPNYLAGSLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLIAGNTDGVKRACALILHTIHAPDHNISGC--AKLLSPELAANVD-VSQ-RMLIPLTAGGLVIGRKGANIAALLEASGAKMTLGQKAE-IKANERLVTVQGKLPQAVKAVEMLLEKLREEPVLSRFSNLS 263
            G+D +  +K L+P+Y AGS+IGK G TI  +Q +T   ++++ S  ++PGT ER  LI G  + +      I   I     N++      +L P+   N D + Q ++++P +  GL+IG+ GA + A++E SGA + L QK + I   ER+VTV G+  Q  KAVE++++K++E+P      N+S
Sbjct:   45 GEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 230          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig874.29.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLG6_9PHAE6.920e-14652.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGY3_ECTSI1.290e-8771.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CIW2_9STRA5.610e-3946.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEM4_9STRA1.670e-3044.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8C4QEJ6_EPTBU2.190e-2424.50NOVA alternative splicing regulator 1 n=2 Tax=Epta... [more]
UPI0004BD8A9A4.720e-2434.72RNA-binding protein Nova-2 n=1 Tax=Equus przewalsk... [more]
V9LF99_CALMI7.020e-2436.16Neuro-oncological ventral antigen 1 (Fragment) n=1... [more]
V9L9T6_CALMI9.090e-2435.14RNA-binding protein Nova-1-like protein (Fragment)... [more]
A0A6J0T607_9SAUR4.010e-2326.59RNA-binding protein Nova-2 isoform X1 n=12 Tax=Sau... [more]
P51513-54.780e-2335.48Isoform 3 of RNA-binding protein Nova-1 n=171 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 603..676
e-value: 3.9E-15
score: 66.3
coord: 180..252
e-value: 7.8E-9
score: 45.4
coord: 86..159
e-value: 4.9E-9
score: 46.0
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 86..161
e-value: 2.9E-16
score: 61.0
coord: 603..678
e-value: 2.0E-21
score: 77.5
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 181..255
e-value: 2.1E-13
score: 51.8
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 89..160
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 179..258
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 605..678
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 607..672
e-value: 2.1E-15
score: 56.3
coord: 184..247
e-value: 1.9E-9
score: 37.2
coord: 91..155
e-value: 2.1E-12
score: 46.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..463
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 427..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..381
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 546..569
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..313
NoneNo IPR availablePANTHERPTHR10288:SF261PASILLA, ISOFORM Rcoord: 79..683
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 79..683
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 181..247
score: 14.864578
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 87..154
score: 15.179027
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 604..671
score: 18.491213
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 90..155
e-value: 4.61296E-14
score: 65.1903
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 185..247
e-value: 8.22208E-13
score: 61.7235
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 611..672
e-value: 6.17759E-15
score: 67.8867

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig874contigA-nodosum_M_contig874:252372..270138 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig874.29.4mRNA_A-nodosum_M_contig874.29.4Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig874 250886..270385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig874.29.4 ID=prot_A-nodosum_M_contig874.29.4|Name=mRNA_A-nodosum_M_contig874.29.4|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=689bp
MEEDSMPTQVANEDQLSIEQPAPAFIEQGNEDVGSSGDVVVQVVQEEKDR
EKQSLASGETDGADNGAQIPGQQQQPQQQQSPGQDPESAIKYLVPNYLAG
SLIGKKGATIKDIQVKTSCMVRIATSGMYFPGTMERAVLIAGNTDGVKRA
CALILHTIHAPDHNISGCAKLLSPELAANVDVSQRMLIPLTAGGLVIGRK
GANIAALLEASGAKMTLGQKAEIKANERLVTVQGKLPQAVKAVEMLLEKL
REEPVLSRFSNLSVSYRGHGSSTSKAASAAGIAPTAEPYQRGARDSSTVT
SSPTPEESASSVLSGVSVAAGVTDVDASTAAATGDCGSSAGSPAKSVSSK
AESPPRLTSPARAVRGGGYAGQMAGRGMGAGTGGRFLQHQQHQHQQPFRQ
PMRQPMQHQHHQVVHQHHHRMRQQAHQFHQQPHQQHQHFAISPSRGPPVP
HQPHSPPPQQQQQQPPQHQHQPPMMQMTPAGPMVAAPPDHQMGVMTPLGT
IVSNPPAMHRMGMAYGPPPAAGAYFSGGMQAPGVAAAVATGMVARGPDGQ
QAPRGGYAAPTPMSPPPGPPLQAQPQQHQQQVLMTMEAPVTNPIAAAVAS
CPPTTSVTVGVPNNMIGAILGRGGATIAELQSMSGARINVSQRDELLPGT
DSRLLTISGTPMATQAAQYLVSQKIQEIADRRRDGQSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1