prot_A-nodosum_M_contig874.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig874.14.1
Unique Nameprot_A-nodosum_M_contig874.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length77
Homology
BLAST of mRNA_A-nodosum_M_contig874.14.1 vs. uniprot
Match: A0A6H5KJF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF0_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 3.780e-38
Identity = 58/73 (79.45%), Postives = 66/73 (90.41%), Query Frame = 0
Query:    1 MGKHDRPQTIKSVLINLWSIMTILFPIAIIVRPDLLWDLVMVWAASTSVMLVVPPLGWIRPHPYSDFEWNRRR 73
            MG HDRPQT KSVLIN+WS +TI+ PI IIVR DLLWDL+MVWAA+TS+M+VVPP+GWIRPHPYSDF WNRRR
Sbjct:    1 MGNHDRPQTTKSVLINMWSTLTIVLPIFIIVRFDLLWDLLMVWAAATSIMMVVPPVGWIRPHPYSDFVWNRRR 73          
BLAST of mRNA_A-nodosum_M_contig874.14.1 vs. uniprot
Match: A0A835Z948_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z948_9STRA)

HSP 1 Score: 102 bits (254), Expect = 6.090e-24
Identity = 43/73 (58.90%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    1 MGKHDRPQTIKSVLINLWSIMTILFPIAIIVRPDLLWDLVMVWAASTSVMLVVPPLGWIRPHPYSDFEWNRRR 73
            M KHD+PQT+KS++INLWS+++IL P+ +IVR +    ++ VW A T +M++VPP GW+RPH YSDFEWNRRR
Sbjct:  366 MAKHDKPQTLKSMVINLWSLVSILGPMVLIVRMETWQAVLAVWVAVTLLMMIVPPFGWLRPHAYSDFEWNRRR 438          
BLAST of mRNA_A-nodosum_M_contig874.14.1 vs. uniprot
Match: A0A7S2A8U7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8U7_TRICV)

HSP 1 Score: 53.1 bits (126), Expect = 3.030e-7
Identity = 27/69 (39.13%), Postives = 37/69 (53.62%), Query Frame = 0
Query:    3 KHDRPQTIKSVLINLWSIMTILFPIAIIVRPDLLWDLVMVWAASTSVMLVVPPLGWIRPHPYSDFEWNR 71
            K DR    KS+ IN+ + +    PIA             V   S ++ L++PP GW+RPHPYSDF WN+
Sbjct:   33 KVDRGLDPKSIAINIATTLFFFLPIAAYFDASNARFYCEVVGWSMALALLIPPFGWLRPHPYSDFAWNK 101          
BLAST of mRNA_A-nodosum_M_contig874.14.1 vs. uniprot
Match: A0A1Z5JU75_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU75_FISSO)

HSP 1 Score: 51.6 bits (122), Expect = 7.460e-7
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    3 KHDRPQTIKSVLINLWSIMTILFPIAI-IVRPDLLWDLVMVWAASTSVMLVVPPLGWIRPHPYSDFEWNR 71
            K D    IKSV INL S + +  PIA+ +     +++++    AS ++  V+PP+GW RPHPYSD   NR
Sbjct:   11 KEDTGTDIKSVAINLASNLLMALPIALYMTSAKYVYEMMAGLMASFALAYVLPPMGWRRPHPYSDDPANR 80          
BLAST of mRNA_A-nodosum_M_contig874.14.1 vs. uniprot
Match: A0A7S1UMW7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UMW7_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 4.090e-6
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 0
Query:    4 HDRPQTIKSVLINLWSIMTILFPIAIIVRPDLLWDLVMVWAASTSVMLVVPPLGWIRPHPYSDFEWN 70
            HD    +KS+LIN  S++ I  P A+ +  +         AAS +V L+ PP+GW+RPHPYSD E N
Sbjct:   48 HD----VKSILINGSSMLLISLPFALYLDTENSLYYCGGVAASFAVTLLYPPIGWMRPHPYSDMEKN 110          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig874.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KJF0_9PHAE3.780e-3879.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z948_9STRA6.090e-2458.90Sulfotransferase family-domain-containing protein ... [more]
A0A7S2A8U7_TRICV3.030e-739.13Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1Z5JU75_FISSO7.460e-741.43Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S1UMW7_9STRA4.090e-643.28Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig874contigA-nodosum_M_contig874:81491..81721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig874.14.1mRNA_A-nodosum_M_contig874.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig874 52955..82900 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig874.14.1 ID=prot_A-nodosum_M_contig874.14.1|Name=mRNA_A-nodosum_M_contig874.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=77bp
MGKHDRPQTIKSVLINLWSIMTILFPIAIIVRPDLLWDLVMVWAASTSVM
LVVPPLGWIRPHPYSDFEWNRRRRTT*
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