prot_A-nodosum_M_contig870.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig870.14.1
Unique Nameprot_A-nodosum_M_contig870.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length96
Homology
BLAST of mRNA_A-nodosum_M_contig870.14.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 4.640e-18
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    1 MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGK 87
            MV  L  +A +P RR L++RM  +   L+  VA ML  ++V++TTDGWTSR NESY+S TV Y++ +WK+  L+L C+K  G+T G+
Sbjct:    1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGE 87          
BLAST of mRNA_A-nodosum_M_contig870.14.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 8.570e-18
Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = 0
Query:    5 LKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGK 87
            L  KA  P RR L+ +M E+  +L+  VA ML  +YV++TTDGWTSR+NESY+S TV Y++  W++  L+L+C+K  GST G+
Sbjct:   41 LNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGE 123          
BLAST of mRNA_A-nodosum_M_contig870.14.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 4.630e-13
Identity = 32/87 (36.78%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    1 MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGK 87
            MVR LK +A++P +R+ + ++  +   L   V   LTG++V++T+DGWTS +N++Y+ FT  Y++ ++ +V L + C K  G T G+
Sbjct:   10 MVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGE 96          
BLAST of mRNA_A-nodosum_M_contig870.14.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 5.850e-12
Identity = 30/86 (34.88%), Postives = 54/86 (62.79%), Query Frame = 0
Query:    1 MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKG 86
            MV  ++  A +P+++  +  M  +   +   V+ ++ G+ V +T+DGWTS AN++Y+S T   +   WK+VTL++ CSK +G+T G
Sbjct:    1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTG 86          
BLAST of mRNA_A-nodosum_M_contig870.14.1 vs. uniprot
Match: X1WY43_ACYPI (DUF659 domain-containing protein n=2 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WY43_ACYPI)

HSP 1 Score: 66.6 bits (161), Expect = 6.730e-11
Identity = 31/84 (36.90%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    1 MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTG-QYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGS 83
            ++ T++   +IP R+ +  R+E++ +D   S+  ++    Y+S+TTDGWTS A +SY++FTV Y +D+WK+ ++ LS  + Q S
Sbjct:   49 LISTIEPLYTIPSRKSITTRIEKMYIDKSQSIRNIIENINYISLTTDGWTSTAIDSYLTFTVHYFDDNWKLYSVTLSIEEIQES 132          
BLAST of mRNA_A-nodosum_M_contig870.14.1 vs. uniprot
Match: J9KYL2_ACYPI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KYL2_ACYPI)

HSP 1 Score: 61.2 bits (147), Expect = 7.310e-9
Identity = 29/84 (34.52%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTG-QYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGS 83
            ++ T++   +IP R+ +  R+E++ +D   S+  ++    Y+S+TTDGW+S A +SY++FT  Y +D+WK+  + LS  + Q S
Sbjct:   76 LISTIEPLYTIPSRKSITTRIEKMYIDKSQSIRNIVKNINYISLTTDGWSSTAIDSYLTFTDHYFDDNWKLYGVTLSIEELQES 159          
BLAST of mRNA_A-nodosum_M_contig870.14.1 vs. uniprot
Match: UPI002015416C (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Alosa alosa TaxID=278164 RepID=UPI002015416C)

HSP 1 Score: 60.5 bits (145), Expect = 1.380e-8
Identity = 29/80 (36.25%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    2 VRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQ 81
            V  L+ +  IP  R + +++ +L    +G +  ML G+ +S+TTDGW+S A ESY++ T  ++++DW+M  + L  SK Q
Sbjct:  134 VHELEPRFKIPCYRTMNSKITKLYDTTKGGIREMLHGEKLSLTTDGWSSLATESYVTVTAHFIDEDWEMRNVVLDTSKLQ 213          
BLAST of mRNA_A-nodosum_M_contig870.14.1 vs. uniprot
Match: UPI0005EE0631 (netrin receptor UNC5C-like n=1 Tax=Wasmannia auropunctata TaxID=64793 RepID=UPI0005EE0631)

HSP 1 Score: 60.1 bits (144), Expect = 1.970e-8
Identity = 32/85 (37.65%), Postives = 49/85 (57.65%), Query Frame = 0
Query:    5 LKGKASIPQRRVLIARMEELLVDLQGSVATML--TGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGK 87
            L  K S+P+R  + A++ E+  ++Q SV  +L      +S T DGWTS A +SY   T  ++N+DWK+V++AL      G   GK
Sbjct:  174 LNPKISMPKRTAMRAKVVEVFTEIQKSVIDILKQNKSKISFTLDGWTSIAGKSYYGITAHFINNDWKLVSVALDFVASNGCHTGK 258          
BLAST of mRNA_A-nodosum_M_contig870.14.1 vs. uniprot
Match: A0A6G0IE79_LARCR (Uncharacterized protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0IE79_LARCR)

HSP 1 Score: 59.7 bits (143), Expect = 2.540e-8
Identity = 26/80 (32.50%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    2 VRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQ 81
            V+ L+ + ++P R  +  R+ +L    + ++  ML+G+ +S+TTDGWTS A E+Y++ T  ++N+DW++  + L  ++ Q
Sbjct:   42 VQELEPRYAVPSRATISDRVVKLYDATKDNIKKMLSGENISLTTDGWTSIATEAYVTVTAHFINEDWELKDIILKTAEVQ 121          
BLAST of mRNA_A-nodosum_M_contig870.14.1 vs. uniprot
Match: A0A6G0IJ18_LARCR (Uncharacterized protein n=5 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0IJ18_LARCR)

HSP 1 Score: 59.7 bits (143), Expect = 2.560e-8
Identity = 26/80 (32.50%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    2 VRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQ 81
            V+ L+ + ++P R  +  R+ +L    + ++  ML+G+ +S+TTDGWTS A E+Y++ T  ++N+DW++  + L  ++ Q
Sbjct:   84 VQELEPRYAVPSRATISDRVVKLYDATKDNIKKMLSGENISLTTDGWTSIATEAYVTVTAHFINEDWELKDIILKTAEVQ 163          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig870.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI4.640e-1847.13Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE8.570e-1849.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE4.630e-1336.78Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L7Y8_9PHAE5.850e-1234.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
X1WY43_ACYPI6.730e-1136.90DUF659 domain-containing protein n=2 Tax=Acyrthosi... [more]
J9KYL2_ACYPI7.310e-934.52Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ac... [more]
UPI002015416C1.380e-836.25E3 SUMO-protein ligase ZBED1-like n=1 Tax=Alosa al... [more]
UPI0005EE06311.970e-837.65netrin receptor UNC5C-like n=1 Tax=Wasmannia aurop... [more]
A0A6G0IE79_LARCR2.540e-832.50Uncharacterized protein n=1 Tax=Larimichthys croce... [more]
A0A6G0IJ18_LARCR2.560e-832.50Uncharacterized protein n=5 Tax=Larimichthys croce... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 34..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig870contigA-nodosum_M_contig870:313575..313862 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig870.14.1mRNA_A-nodosum_M_contig870.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig870 313575..315206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig870.14.1 ID=prot_A-nodosum_M_contig870.14.1|Name=mRNA_A-nodosum_M_contig870.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=96bp
MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTS
RANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGKTWLYPSRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf