prot_A-nodosum_M_contig87.9.6 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig87.9.6
Unique Nameprot_A-nodosum_M_contig87.9.6
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length199
Homology
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BLAST of mRNA_A-nodosum_M_contig87.9.6 vs. uniprot
Match: A0A6H5L191_9PHAE (OTU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L191_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 8.910e-49
Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 0 
Query:    1 MRNQAVDEASDSNRLRVIHNPSRYLSFFDGETEGARERMLKRWTNEMSKKGTWADQLFINAIARAHQVNIRILVSSGKGTLRDEQGNYAGQGMARRTLYMLHTGGCHFEALKVLGKVQPI-GYEEQKI 127
            MRNQAVD+        V  +P+RY+ FFDGETEG R+ ML +WT  M +KG WADQLFINA+ARAH+VNIRILV     TLRDEQGNYAGQG ARRT YMLHTGG HFEALK LG+V+PI G++ Q++
Sbjct:   75 MRNQAVDQ--------VYSHPARYMDFFDGETEGRRKGMLYKWTRLMRQKGEWADQLFINAVARAHEVNIRILVPEKNNTLRDEQGNYAGQGTARRTYYMLHTGGNHFEALKALGEVKPIDGWKVQEV 194
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig87.9.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L191_9PHAE8.910e-4965.63OTU domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.80coord: 1..117
e-value: 2.1E-13
score: 52.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..198
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 17..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig87contigA-nodosum_M_contig87:192692..194722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig87.9.6mRNA_A-nodosum_M_contig87.9.6Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig87 192584..196037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig87.9.6 ID=prot_A-nodosum_M_contig87.9.6|Name=mRNA_A-nodosum_M_contig87.9.6|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=199bp
MRNQAVDEASDSNRLRVIHNPSRYLSFFDGETEGARERMLKRWTNEMSKK
GTWADQLFINAIARAHQVNIRILVSSGKGTLRDEQGNYAGQGMARRTLYM
LHTGGCHFEALKVLGKVQPIGYEEQKIPEPSKPSTAEGSTCALPPPKSEP
MPKPEPEPKPEPKLEPEPKPEPVPEPMPKLLTKPKPVEKPRPRKYRVY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf