prot_A-nodosum_M_contig87.46.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig87.46.1
Unique Nameprot_A-nodosum_M_contig87.46.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length827
Homology
BLAST of mRNA_A-nodosum_M_contig87.46.1 vs. uniprot
Match: D7G1J3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J3_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 1.390e-87
Identity = 256/568 (45.07%), Postives = 305/568 (53.70%), Query Frame = 0
Query:    1 MGPNSGGGRKNKADAAKVSSARGRFSNCAFPGNSKAKRGGKGXXXXXXXXXXXXXXNAAPSEGGDXXXXXXXXXXX--PSDAAVVKKLSERVSSGATSGVVVKNQAVALGGDGGNRDPLRGVDVASLDEISIAEGDWQRVFRLLKDLGLFEGSSSGPIDEGGTSGDP--DPGTDEKNPRADERMATVTTTTPPRNRPSNSPLDRRPPATAKAEASDRSVSGSSSPTLSAKAPTTAASQDTHPTRPANVAAAPTATAAVLAYLTEVLAFPEMDAARALSNTSGDDLGEALDYLCLHTDEAALKKYFCRGAGTRNDARGGVKGKGKGSAGPGGERKSPAGLAXXXXXXVPAGIEVASSADWKVENRVLTLVRMGFHRDEAVAALTGGRGGGCPPSGEVLGHDTLERLLESLCPLPRRDRSRDRSSGDFSAASASACRKEEASVLSAIFEDGAFRAYGDENAGGGVRWEVDTSLEFDGGGISEHSTVTILFREDSRYPHEAPLVLVTNESLPPGLARRLTEGANAQAAELVGPDPFVYQLVGWLRGASREFQAAFLRDAKKREERLAAEKK 564
            MGPNSGGG++NK DA+KVSSARGRFS  AFP N K K+GG G XXXXXXX         PS+ G   XXXXXXXXX  P+DA V++KLSERVSSGATSGV +          GG RDPL+GVDVA L+EISIAEGDWQ VFRLLKD+GLF+  S+GP     +SG                                                                        Q   P              A+++YLT++LAFPE DAA ALSNTSG+DL EALDYLCLHTD+  LK+ F RG+G         KG                   XXXXXX  + IEVASSADWKVE+RVL+LV+MGF R+EA AAL+        PSGEV+GHDTL RLLE   P           +G  S  S+ + R EE  VLS+IF + AFR  G +     +RW+VD  LEFDGGGIS  +TV  LF+                        +RL E ANA+A  + GPDP V+ LV WL+GAS+     FL   ++REER AAEKK
Sbjct:   20 MGPNSGGGKRNKVDASKVSSARGRFSKSAFPVNKKTKKGGGGRXXXXXXXK--------PSDAGGRGXXXXXXXXXGRPTDATVIQKLSERVSSGATSGVGLAA--------GGGRDPLKGVDVAGLEEISIAEGDWQSVFRLLKDIGLFD--SAGPDGVNSSSGSTLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHDP--------------AIMSYLTKLLAFPEADAAAALSNTSGNDLAEALDYLCLHTDDEGLKRGFRRGSGXXXXXXXXRKGXXX-------XXXXXXXXXXXXXXXXSSAIEVASSADWKVEHRVLSLVKMGFKREEAEAALS------ASPSGEVMGHDTLTRLLEPFRPSGS-------GAGAGSKESSLSTRAEEELVLSSIFGEKAFRVVGGKEGRDALRWDVDVGLEFDGGGISADTTVMFLFQR----------------------GKRLIEAANARAGAMAGPDPIVHGLVDWLQGASKACHTKFLAAVREREERAAAEKK 513          
BLAST of mRNA_A-nodosum_M_contig87.46.1 vs. uniprot
Match: A0A6H5KVD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD8_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 8.440e-37
Identity = 118/263 (44.87%), Postives = 146/263 (55.51%), Query Frame = 0
Query:   77 PSDAAVVKKLSERVSSGATSGVVVKNQAVALGGDGGNRDPLRGVDVASLDEISIAEGDWQRVFRLLKDLGLFEGSSSGPIDEGGTSGDPDPGTDEKNPRADERMATVTTTTPPRNRPSNSPLDRRPPATAKAE-ASDRSVSGSSS-----------------PTLSAKAPTTAASQDTHPTRPANVAAAPTATAAVLAYLTEVLAFPEMDAARALSNTSGDDLGEALDYLCLHTDEAALKKYFCRGAGTRNDARGGVKGKGKG 321
            P+DA V++KLSERVSSGATSGV +          GG RDPL+GVDVA L+EISIAEGDWQ VFRLLKD+GLF+  S+GP  +GG S             +   ++        RN  + SP D   P TA    AS R  S   +                 P+    AP T+ +Q      PA           +++YLT++LAFPE DAA ALSNTSG+DL EALDYLCLHTD+A LK+ F RG+G       G KG G+G
Sbjct:   67 PTDATVIQKLSERVSSGATSGVGLAA--------GGGRDPLKGVDVAGLEEISIAEGDWQSVFRLLKDIGLFD--SAGP--DGGNSS------------SGSTLSXXXXXXXXRN--TTSPGDPGGPNTATGPGASSRQTSAEPAAXXXXXXXXXXXXXXXXPSNLPTAPATSQTQQEQQHDPA-----------IMSYLTKLLAFPEADAATALSNTSGNDLAEALDYLCLHTDDAGLKRGFRRGSGXXXXXXVGHKGGGRG 292          
BLAST of mRNA_A-nodosum_M_contig87.46.1 vs. uniprot
Match: A0A835Z857_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z857_9STRA)

HSP 1 Score: 120 bits (301), Expect = 5.870e-24
Identity = 116/337 (34.42%), Postives = 159/337 (47.18%), Query Frame = 0
Query:  257 YLTEVLAFPEMDAARALSNTSGDDLGEALDYLCLHTDEAALKKYFCRGAGTRNDARGGVKGKGKGSAGPGGERKSPAGLAXXXXXXVPAG-IEVASSADWKVENRVLTLVRMGFHRDEAVAALTGG----RGGGCPPSGEVLGHDTLERLLESLCP--LPRRDRSRDRSSGDFS--AASASACRKEEASVLSAIFEDGAFRAYGDENAGGGVRWEVDTSLEFDGGGISEHST--------------VTILF------REDSR-------YPHEAPLVLVTNESLPPGLARRLTEGANAQAAELVGP-DPFVYQLVGWLRGASREFQAAFLRDAKKRE 556
            YLT+ L+F + DA  AL+ T GDDLG+ALDYLCLH  E+ LK+ F RG+     +               G+  + A  A        AG +EV S ADW  ++ +L LVRMGF + EA AAL  G    RG   PPS      DTL   L  L    L      +D    D+   AAS      EE + L AI+ +   R +        +  E++ S + D    +  S+              +T+LF      R           YP +APLVLV  E LPPGLAR L  G   +A EL G  +P V++LV +L+ ++   +A FL +A++RE
Sbjct:  179 YLTQRLSFSDADAMTALAATGGDDLGQALDYLCLHLPESVLKEGFKRGSNANRTS---------------GDASALAASALGSQTPDAAGSLEVVSKADWARDSALLQLVRMGFIQSEAEAALRKGPRESRGSPKPPSATA--DDTLAAALTHLVQSALEGAAEQQDLQEKDYGEGAASEKEVMAEERTALEAIYAERFKRVHSRRYE---LTIELELSSKLDAALAAAASSDSRAQAVAPACEVQLTVLFPPLGGGRSPMARMWNYVPYPKQAPLVLVRGEGLPPGLARALMVGIARKANELSGRGEPMVFELVSFLQESAAPIRAQFLHEAEERE 495          
BLAST of mRNA_A-nodosum_M_contig87.46.1 vs. uniprot
Match: D7G1J2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J2_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 4.570e-21
Identity = 101/196 (51.53%), Postives = 124/196 (63.27%), Query Frame = 0
Query:  594 EAKTEEEAG-----------WRLAYLQGLNGGLDPEQARKSADMASGRSVASSTSPLTVSRGTKKAKAAXXXXXXXXXXXXXXXXXXXXXXTP--------PENAARKLRLALVAEGREPGEVSSEAVGVFSDGSGNGVVAVAAGGDGYRATPYLHEVMQVLEETKECQPWLEAEEAKDLPLPPIAHATERAMETQ 770
            +AK EEEA            WRL YL+GLN GLD ++A+ +AD A+GR+   +  P    R T K  A  XXXXXXXXXXXXXXXXXXXXX          P  A  KL LAL A+G      + E+ GV  DG G   +A+A   DGY+ +PYL EVM+VLE+TK  QPWLEA+EAK+LPLPP+AHA E+AM+ Q
Sbjct:   22 KAKAEEEASRGREGRGDEDEWRLEYLKGLNAGLDNQKAKDAADKATGRTA--TKPPPAPMRATSKPSARSXXXXXXXXXXXXXXXXXXXXXXXXXXXNQAVPAAALHKLHLALTADGG-----AGESGGV--DGGGGMAIAMA---DGYKPSPYLQEVMEVLEDTKASQPWLEAQEAKNLPLPPLAHAAEQAMQAQ 205          
BLAST of mRNA_A-nodosum_M_contig87.46.1 vs. uniprot
Match: A0A6H5L0U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U7_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.090e-8
Identity = 55/142 (38.73%), Postives = 66/142 (46.48%), Query Frame = 0
Query:  676 PENAARKLRLALVAEGREPGEVSSEAVGVFSDGSGNGVVAVAAGGDGYRATPYLHEVMQVLEETKEC---------------------------------------------QPWLEAEEAKDLPLPPIAHATERAMETQRN 772
            P  A  KL LAL A+G   G   S  VG    G G   +A+A   DGYR +PYL EVM+VLE+TK C                                             QPWLEA+EAK+LPLPP+AHA E+AM+ Q N
Sbjct:    6 PAAALHKLHLALTADG---GAGESGGVG----GGGGMAIAMA---DGYRPSPYLQEVMEVLEDTKGCCVEISTAFNLNLPSKSNXXXXXXXXXGRKNSDNPTAANTVIPQASQPWLEAQEAKNLPLPPLAHAAEQAMQAQPN 137          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig87.46.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G1J3_ECTSI1.390e-8745.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVD8_9PHAE8.440e-3744.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z857_9STRA5.870e-2434.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G1J2_ECTSI4.570e-2151.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0U7_9PHAE1.090e-838.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006575RWD domainPFAMPF05773RWDcoord: 431..538
e-value: 3.6E-6
score: 27.2
IPR006575RWD domainPROSITEPS50908RWDcoord: 433..544
score: 10.964397
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 423..546
e-value: 9.3E-7
score: 30.6
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 432..544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 614..682
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..578
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 579..596
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 628..678
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 779..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 770..803
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..601

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig87contigA-nodosum_M_contig87:687847..723139 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig87.46.1mRNA_A-nodosum_M_contig87.46.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig87 687243..723253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig87.46.1 ID=prot_A-nodosum_M_contig87.46.1|Name=mRNA_A-nodosum_M_contig87.46.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=827bp
MGPNSGGGRKNKADAAKVSSARGRFSNCAFPGNSKAKRGGKGRGGGRGGG
GGRGAGNAAPSEGGDGGGGRGRGGGRPSDAAVVKKLSERVSSGATSGVVV
KNQAVALGGDGGNRDPLRGVDVASLDEISIAEGDWQRVFRLLKDLGLFEG
SSSGPIDEGGTSGDPDPGTDEKNPRADERMATVTTTTPPRNRPSNSPLDR
RPPATAKAEASDRSVSGSSSPTLSAKAPTTAASQDTHPTRPANVAAAPTA
TAAVLAYLTEVLAFPEMDAARALSNTSGDDLGEALDYLCLHTDEAALKKY
FCRGAGTRNDARGGVKGKGKGSAGPGGERKSPAGLAPSGSGAVPAGIEVA
SSADWKVENRVLTLVRMGFHRDEAVAALTGGRGGGCPPSGEVLGHDTLER
LLESLCPLPRRDRSRDRSSGDFSAASASACRKEEASVLSAIFEDGAFRAY
GDENAGGGVRWEVDTSLEFDGGGISEHSTVTILFREDSRYPHEAPLVLVT
NESLPPGLARRLTEGANAQAAELVGPDPFVYQLVGWLRGASREFQAAFLR
DAKKREERLAAEKKLRAASARDKSRASKGSRGVLQQQQQQQQPEAKTEEE
AGWRLAYLQGLNGGLDPEQARKSADMASGRSVASSTSPLTVSRGTKKAKA
ATSSSATTATSSDDDCRQKAQQSTPPENAARKLRLALVAEGREPGEVSSE
AVGVFSDGSGNGVVAVAAGGDGYRATPYLHEVMQVLEETKECQPWLEAEE
AKDLPLPPIAHATERAMETQRNRRGHHAKKCPSQEEEQEHRGGAMEGGRE
SDARTMTIMVVQVKLVIPRHMTMAKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006575RWD-domain
IPR016135UBQ-conjugating_enzyme/RWD