prot_A-nodosum_M_contig87.32.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig87.32.1
Unique Nameprot_A-nodosum_M_contig87.32.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length879
Homology
BLAST of mRNA_A-nodosum_M_contig87.32.1 vs. uniprot
Match: A0A6H5KCH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCH0_9PHAE)

HSP 1 Score: 400 bits (1028), Expect = 2.930e-124
Identity = 250/570 (43.86%), Postives = 320/570 (56.14%), Query Frame = 0
Query:  175 IATGATTRSVFLAGGCGVDEDELPPRTEKVDENTQEVPAAG---VEQRDGDGDEDPAVGAVSTTVTTGGEGSSSPNDPQLVKNCRATDVVDVFVAAG---HDRDGGGEGVGVVTIAN-DTIRLCEAKYAAAVGVFYTGTPDDGSPSSWSSTAHVMVAGGVVPTGDGEN---YAATDTIDILREDAVDPATGKAKITKLDVQRLPNPPRSDMTVCCFKHLCVLAGGRVSIGSVESAFNTDRAEVWDGSTLSFETWGERTLTEARHLMGAAVIEVTLGTEKRVLGFFAGGISNGWNSSMVDMFDFEERRMLPPINAPSVSGSTQGVSLTSEVAAFISVEGKIDVFDGRNLCWTSYEIDGFLRGMSVVGRSPAWFFNASSPGFHESGSGAGSDGVSVQEALAFVGGGA-EDENASGNVLELRWRKMEDPGDPELEACL--------------------------GGQPLRQLQRMCGSPGPDGSIEFCTRCEEERRSRVHAIGAAGSTGGTAASSRKAMPNK-RVYLYIMAALSGILVSYLASAAIILRKEEGVWRLPCGCGWYWC-CPGSSE 705
            +  G T+ +VF AGGCG+++          D+N QE  ++G   V+ R G+ +     G V+  V  G +    PN P L+KNC+ATD VDVF+             EG G +++   D +RLCE KYAA VGVF+TG+PD+G PS+W+ TAHV+VAGG+VPTG GE    Y AT T+DI R D +D ATG+AK+  L V RLPNPPR +MT CCFKH CV AGGRVS+G   + FN+DRAEVWDGST SF TWGE TL+E RHLMG+AVIE++ G+EKR +G F GG+SN  +SSMVD+FDF+ERR+LP ++AP+VS S                                                         PGF  SG      G   +EA AFVGGG       S +V ELRWR+ +  G   +EACL                          GG+ L QLQ++CG PGPDGSI+  T  +EE  S     G   +T GT  S       K  V +YIMAAL GILVSY+ASA +I+RK EG+WRLP G G +   C G+++
Sbjct:    1 MGAGGTSSAVFFAGGCGMED--------VGDDNQQETQSSGPTIVQDRGGESE-----GGVAVDVPPGAD----PNVPLLLKNCQATDAVDVFLLGSGXXXXXXXAQEGKGKLSLLPPDAVRLCEPKYAATVGVFFTGSPDEGDPSAWAPTAHVLVAGGIVPTGGGEGGGQYTATSTVDIFRHDGIDEATGEAKVATLPVPRLPNPPRFEMTSCCFKHQCVFAGGRVSMGEGGAGFNSDRAEVWDGSTWSFATWGEHTLSEPRHLMGSAVIEISTGSEKRTVGMFTGGVSNTGDSSMVDLFDFDERRVLPRMDAPTVSAS---------------------------------------------------------PGFQPSG------GSGAEEASAFVGGGVGRGVGVSRDVRELRWRRRKRGG---MEACLVXVXXXXXXXXXXXXXXXXXXXXXXLGGKSLHQLQKVCGLPGPDGSIQAFTPHDEEEESY---FGGDPTTEGTEPSVGGGGNRKWTVVVYIMAALVGILVSYVASATLIVRKVEGLWRLPFGGGVFGALCEGAAQ 484          
BLAST of mRNA_A-nodosum_M_contig87.32.1 vs. uniprot
Match: D7G1K5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K5_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 2.960e-101
Identity = 189/398 (47.49%), Postives = 249/398 (62.56%), Query Frame = 0
Query:  108 MGAAMLSSPTPAIVFAGGISSAGGAFLEGNVDVFLQPDDSLQEKWEAS-------------EQGLEMERRVLRLRIPRTGIATGATTRSVFLAGGCGVDEDELPPRTEKVDENTQEVPAAGVEQRDGDGDEDPAVGAVSTTVTTGGEGSSSPNDPQLVKNCRATDVVDVF-VAAGHDRDGGGEGVGVVTIAN-DTIRLCEAKYAAAVGVFYTGTPDDGSPSSWSSTAHVMVAGGVVPTGDGEN---YAATDTIDILREDAVDPATGKAKITKLDVQRLPNPPRSDMTVCCFKHLCVLAGGRVSIGSVESAFNTDRAEVWDGSTLSFETWGERTLTEARHLMGAAVIEVTLGTEKRVLGFFAGGISNGWNSSMVDMFDFEERRMLPPINAPSVSGSTQG 487
            MGA M+  P   I+FAGGI   GG  ++ NVDVF  P D  ++                  E+ L ++R VL L + RT +  G T+ ++F AGGCG+++                          G          V+  V  G +    P+ P L+KNC+ATD VDVF + +G   DG  EG G +++   D +RLCE KYAA VGVF+TG+PD+G PS+W+ TAHV+VAGG++PTG GE    Y AT T+DI R D +D ATG+AK+  L V RLPNPPR +MT CCFKH CV AGGRVS+G   + FN+DRAEVWDG+T SF TWGE TL+E RHLMG+AVIE++ G EKR +G FAGG+SN  +SSMVD+FDF+ERR+LP ++AP+V  + +G
Sbjct:    1 MGAVMVDDPA-VILFAGGIGR-GGMVVDSNVDVFAVPLDVDEDXXXXXXXXXXXXXXXXXXEETL-VDRDVLSLGVARTDMGAGGTSSAMFFAGGCGMEDVGDXXXXXXXXXXXXXXXXXXXXXXXG----------VAVDVPPGAD----PDVPLLLKNCQATDAVDVFFLGSGGGGDGAQEGKGKLSLLPPDAVRLCEPKYAATVGVFFTGSPDEGDPSAWAPTAHVLVAGGIIPTGGGEGGGQYTATSTVDIFRHDGIDEATGEAKVATLPVPRLPNPPRFEMTSCCFKHQCVFAGGRVSMGEGGAGFNSDRAEVWDGATWSFATWGEHTLSEPRHLMGSAVIEISTGPEKRTVGMFAGGVSNTGDSSMVDLFDFDERRVLPRMDAPTVRANARG 381          
BLAST of mRNA_A-nodosum_M_contig87.32.1 vs. uniprot
Match: A0A835ZD19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD19_9STRA)

HSP 1 Score: 273 bits (699), Expect = 1.030e-76
Identity = 200/584 (34.25%), Postives = 268/584 (45.89%), Query Frame = 0
Query:  168 LRIPRTGIATGATTRSVFLAGGCGVDEDELPPRTEKVDENTQEVPAAGVEQRDGDGDEDPAVGAVSTTVTTGGEGSSSPNDPQLVKNCRATDVVDVFVAAGHDRDGGGEGVGVVTIANDTIRLCEAKYAAAVGVFYTGTPDDGSPSSWSSTAHVMVAGGVVPTGDGENYAATDTIDILREDAVDPATGKAKITKLDVQRLPNPPRSDMTVCCFKHLCVLAGGRVSIGSVESAFNTDRAEVWDGSTLSFETWG---ERTLTEARHLMGAAVIEVTLGTEK-RVLGFFAGGISNGWNSSMVDMFDFEERRMLPPINAPSVSGSTQGVSLTSEVAAFISVEGKIDVFDGRNLCWTSYEIDGFLRGMSVVGRSPAWFFNASSP-----GFHESGSGAGSDGVSVQEALAFVGGG--AEDENASGNVLELRW--------------------RKMEDPGDPELE--------ACLGG--QPLRQLQRMCGSPG---------------PDGSIEFCTRCEEERRSRVHAIGAAGSTGGTAASSRKAMPNKRVYLYIMAALSGILVSYLASAAIILRKEEGVWRLPCGCG 695
            L +PRT +    T  +++L GGCG+  D +                     RDG                             LV +C+ +D+VDVF               +   +     LCE KYAA  GVF+TG PD G    W+ T HV+VAGG+V  G+G  Y ATDTIDILRE+ V  A GK  +T L VQRLP P R DM+ CCFKH+CV AGG+V++      + +DR +VW+G     E WG   + TL+EAR  MG A +E+ L      ++GFFAGG+    N  +VD++DF   R LP I  P+V G   GV+L  + A FI+  G++DVF+  +LCWTSY++DG   G    GR+P W+F+  +      G++ SG GA        E LA+V GG        S  + EL                      RK   P    L         AC      PL  +Q  CG+ G               P  +               H  G+   +G          P  RV +Y+M A   +LVSY+ SAAIILR+ EG+WRLP G G
Sbjct:   83 LSMPRTDMGAAVTNAAMYLVGGCGLYSDPI---------------------RDG---------------------------LLLVNDCKPSDLVDVFAPNWTAAARLPSARPLPMQSTQGFHLCEPKYAATTGVFWTGEPDQGMGGPWAQTPHVVVAGGIVSVGEGM-YRATDTIDILREEGVTRA-GKVSVTNLPVQRLPQP-RFDMSSCCFKHICVFAGGQVNL----DGYFSDRVDVWNG-----ERWGWTSDHTLSEARFGMGTASLEMALADGVVHMVGFFAGGVGRAGNLFLVDLYDFASDRWLPRIYLPTVRGKCSGVTLGIDAAMFIADTGEVDVFNSTSLCWTSYKLDGIALGAVAAGRAPQWYFDPDATAGGGSGYYRSGGGA-------PEGLAYVAGGIWGAAHGLSSQLTELTLALMQSRCLALSAQMPVEKMPRKNVSPNAVPLPRIVRADAGACRDALSMPLAPVQMQCGAMGGGDVLGAFKNPLDVAPPPAKPVAXXXXXXXXXXXHKDGSMWPSG--------LGPRTRVVVYLMIAALALLVSYMVSAAIILRRTEGIWRLPFGGG 591          
BLAST of mRNA_A-nodosum_M_contig87.32.1 vs. uniprot
Match: D7G1K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K4_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 6.220e-17
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = 0
Query:  594 LEACLGGQPLRQLQRMCGSPGPDGSIEFCTRCEEERRS------RVHAIGAAGSTGGTAASSRKAMPNKRVYLYIMAALSGILVSYLASAAIILRKEEGVWRLPCGCGWYWC-CPGSSE 705
            +EACLGG+ L QLQ++CG PGPDGSI+  T  +EE  S           G + S GG    SRK      V +YIMAAL GILVSY+ SA +I+RK EG+WRLP G G +   C G+++
Sbjct:    1 MEACLGGKSLHQLQKVCGLPGPDGSIQAFTPHDEEEGSYFGDDPTTEDPGPSLSGGG----SRK----WTVIVYIMAALVGILVSYVTSATLIVRKVEGLWRLPFGGGVFEALCEGAAQ 111          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig87.32.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KCH0_9PHAE2.930e-12443.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1K5_ECTSI2.960e-10147.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZD19_9STRA1.030e-7634.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G1K4_ECTSI6.220e-1748.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 305..589
e-value: 2.0E-5
score: 25.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 744..768
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 863..878
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 843..878
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 749..763

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig87contigA-nodosum_M_contig87:516671..576202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig87.32.1mRNA_A-nodosum_M_contig87.32.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig87 516403..579306 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig87.32.1 ID=prot_A-nodosum_M_contig87.32.1|Name=mRNA_A-nodosum_M_contig87.32.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=879bp
MLGLSRRYRQQCGLKVFLCPIARCGCHCRVSLCNVRRTKSSLLLLMMTAC
TLLLAKMAVVSGTLTSMCATPLIPRDGDRHFEVVDGGTIQQEKKIQDDGA
LSSKRGFMGAAMLSSPTPAIVFAGGISSAGGAFLEGNVDVFLQPDDSLQE
KWEASEQGLEMERRVLRLRIPRTGIATGATTRSVFLAGGCGVDEDELPPR
TEKVDENTQEVPAAGVEQRDGDGDEDPAVGAVSTTVTTGGEGSSSPNDPQ
LVKNCRATDVVDVFVAAGHDRDGGGEGVGVVTIANDTIRLCEAKYAAAVG
VFYTGTPDDGSPSSWSSTAHVMVAGGVVPTGDGENYAATDTIDILREDAV
DPATGKAKITKLDVQRLPNPPRSDMTVCCFKHLCVLAGGRVSIGSVESAF
NTDRAEVWDGSTLSFETWGERTLTEARHLMGAAVIEVTLGTEKRVLGFFA
GGISNGWNSSMVDMFDFEERRMLPPINAPSVSGSTQGVSLTSEVAAFISV
EGKIDVFDGRNLCWTSYEIDGFLRGMSVVGRSPAWFFNASSPGFHESGSG
AGSDGVSVQEALAFVGGGAEDENASGNVLELRWRKMEDPGDPELEACLGG
QPLRQLQRMCGSPGPDGSIEFCTRCEEERRSRVHAIGAAGSTGGTAASSR
KAMPNKRVYLYIMAALSGILVSYLASAAIILRKEEGVWRLPCGCGWYWCC
PGSSESRSPITSASSRRETFASEGTRLLPPGAIETVRPSGALFARDGSRR
LSTKPHADRGRRFGDGVINGSTAHHHHCHLGQYDLGALERKGVHFFEDDA
FASADGRDARAIETVSQKRRSRKENANHVSILSSSKRAAESALRLAEELA
SGGGEEGTGDEESNMMEEKMELENSSED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller