prot_A-nodosum_M_contig87.12.12 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig87.12.12
Unique Nameprot_A-nodosum_M_contig87.12.12
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1149
Homology
BLAST of mRNA_A-nodosum_M_contig87.12.12 vs. uniprot
Match: D7G1I2_ECTSI (PsbB mRNA maturation factor Mbb1, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I2_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 2.400e-104
Identity = 278/573 (48.52%), Postives = 338/573 (58.99%), Query Frame = 0
Query:  259 LGVIKNAVGGGTAGKKVKVKALYFRARDLLKRSPPAFKE-AIKILEEALNLDAQDGHSWLLLAKTWERRGRVDAARDAFKRATAACPENVHLWQSWGMLEDKFGDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDILKSSRPKAAIASALGELEATRGDLEGARREFQKGLACLEKAGGER------------------ASSRRKPGDREAAEDPAE----ILVAWARLEEQLGGDLDRATQLLEKAQEGDPYDVKIHIERARFEMRRGDMNSARLILSRAANLPQKAGNLFNMWATLETKEGNLDTALKIAKAATDRFPQDKSLLQTLGTVHGKLGQHAEAIECYRRSIAVRPAAPAYVAWALIVAKLADRAARKQSSKSAEEASDDDGDDFRLLGDDNVHASRRAGTARVLLADGIFNGDAATSGSAYSTESSILMDLAPTPPPSSEALDDVRSQAAPSNTLISTSTSVTARGSESSGRDRRGGRLVEG-----KRADDGASYQEARRIFELGIAADPAHGPLYNAYGTMEAKIGNVDHARDVYERGIAARCCGMASVWQG 803
            LGV++ A  GG+  +++KVK LY RAR +L+ S P+  E A  ILEEAL +D QDGHSWLLLA+T E  G V+AA D FKR                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  R+IL+ SR   AI+ AL EL AT G +E  R   QK +  LEKA   R                  A  R K    E AED  +    +L+AWA  EE  G +  R+ +L+ KA E +P + +  + RARFEMRRG+M  AR+ LS AANLPQ+ G LF+MWATLE KEGNL+TALKIA+AAT RFP DK LLQT+GTVHGKLG++ EAIECYRRSIA+ PAAPAYVAWAL+VAKLA+RA R  SSK         G  + ++  D V                 + GDA+  G                                   T++  ++   A GS  +  +  G    EG     +  +   SY+EARR+FELGI ADP HGPLYNAYG+MEAK+GNV+HAR+VY+RGIAARC G   VWQG
Sbjct:  112 LGVLRPAEMGGSRARRIKVKGLYARARKILRSSSPSASETAAAILEEALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAREILEGSRQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGGGGSPDPSAAWAAAGDRPKKRSAEEAEDADQGVTALLMAWANFEESRGNE-KRSLELMAKAMENEPDNARARVGRARFEMRRGNMRDARIFLSEAANLPQEDGTLFSMWATLEIKEGNLETALKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAA-----GPKYGVVAGDPVVE---------------YVGDASDDG-----------------------------------TILGEASDAVAGGSGGTADENDGXXXXEGGVSRTEEEEGPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARNVYKRGIAARCSGAVHVWQG 628          
BLAST of mRNA_A-nodosum_M_contig87.12.12 vs. uniprot
Match: A0A6H5L0Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y9_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 1.780e-86
Identity = 230/569 (40.42%), Postives = 278/569 (48.86%), Query Frame = 0
Query:  258 RLGVIKNAVGGGTAGKKVKVKALYFRARDLLKRSPPAFKE-AIKILEEALNLDAQDGHSWLLLAKTWERRGRVDAARDAFKRATAACPENVHLWQSWGMLEDKFGDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDILKSSRPKAAIASALGELEATRGDLEGARREFQKGLACLEKA--------GGE----------RASSRRKPGDREAAEDPAE----ILVAWARLEEQLGGDLDRATQLLEKAQEGDPYDVKIHIERARFEMRRGDMNSARLILSRAANLPQKAGNLFNMWATLETKEGNLDTALKIAKAATDRFPQDKSLLQTLGTVHGKLGQHAEAIECYRRSIAVRPAAPAYVAWALIVAKLADRAARKQSSKSAEEASDDDGDDFRLLGDDNVHASRRAGTARVLLADGIFNGDAATSGSAYSTESSILMDLAPTPPPSSEALDDVRSQAAPSNTLISTSTSVTARGSESSGRDRRGGRLVEGKRADDGASYQEARRIFELGIAADPAHGPLYNAYGTMEAKIGNVDHARDVYERGIAARCCGMASVWQG 803
            RLGV++ A  G +  +K+KVK LY RAR +L+ S P+  E A  ILEEAL +D QDGHSWLLLA+T E  G V+AA D FKRA   CP N HLWQSWGML+ KFGD                                          + SR   AI+ AL EL AT G +E  R   QK +  LEKA        GGE           A  R K    E AED  +    +L+AWA  EE  G +  RA +L+ KA E +P + +  + RAR                                             LKIA+AAT RFP DK LLQT+GTVHGKLG++ EAIECYRRSIA+ PAAPAYVAWAL+VAKLA+RA R  SSK      + D     + GD  V                 + GDA+  G+       IL +        S+A+       A             +R  E  G                  SY+EARR+FELGI ADP HGPLYNAYG+MEAK+GNV+HAR VY+RGIAARC G   VWQG
Sbjct:  201 RLGVLRPAEMGSSRARKIKVKGLYARARKILRSSSPSASETAAAILEEALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRAVVECPGNAHLWQSWGMLQAKFGDCAKARISFSNGLEADPGRMRYSSPTFLPSYS-----------QGSRQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGGEGSPDPSAAWAAAGDRPKKRSAEEAEDSDQGLTALLMAWANFEESRGNE-KRALELMAKAMENEPDNARARVGRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKETAAGQEQD----VVAGDPVVE----------------YVGDASDDGT-------ILGEA-------SDAVAGGSGGTAAEXXXXXXXXXGVSRTEEEEGP----------------PSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQG 707          
BLAST of mRNA_A-nodosum_M_contig87.12.12 vs. uniprot
Match: A0A7S2DH37_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DH37_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.130e-14
Identity = 42/72 (58.33%), Postives = 51/72 (70.83%), Query Frame = 0
Query:  733 LVEGKRADDGASYQEARRIFELGIAADPAHGPLYNAYGTMEAKIGNVDHARDVYERGIAARCCGMASVWQGL 804
            +++G++        EARR+FELGI ADP+HGPLYNAYG MEA+  N   AR V ERGIAA+C  MA VW GL
Sbjct:  308 MIQGEKQKGKIRVVEARRLFELGIKADPSHGPLYNAYGAMEARHRNFQEARLVLERGIAAKCTDMAHVWHGL 379          
BLAST of mRNA_A-nodosum_M_contig87.12.12 vs. uniprot
Match: A0A2V3J326_9FLOR (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J326_9FLOR)

HSP 1 Score: 89.4 bits (220), Expect = 3.160e-14
Identity = 126/367 (34.33%), Postives = 174/367 (47.41%), Query Frame = 0
Query:  277 VKALYFRARDLLKRSPPAFKEAIKILEEALNLDAQDGHSWLLLAKTWERRGRV----------------------------DAARDAFKRATAACPENVHLWQSWGMLEDKFGD---FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDILKSSRPKAAIASALGELEATRGDLEGARREFQKGLACLEKAGGERASSRRKPGDREAAEDPAEILVAWARLEEQLGGDLDRATQLLEKAQEGDPYDVKIHIERARFEMRRGDMNSARLILSRAANL-PQKAGNLFNMWATLE-TKEGNLDTALKIAKAATDRFPQDKSLLQTLGTVHGKLGQHAEAIECYRRSIAVRPAAPAYVAWALI 610
            V+ ++ RA++  K     F EA  +L + L+LD QD HSWL LA+   R G V                            + AR  FK+    CP ++HL Q+W +LE + G+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     S RP   + +                   +KGL   + AG + +++                +                      KA    P   + ++   R E RRG    A  ++  AA+L P+   ++FN WA +E T  G ++ A K+ K   D  P D ++LQ+LGT+  + G   EA   + RS+  RP APA+VAWAL+
Sbjct:  292 VRTIFERAKEEEKNGN--FNEARTLLRQCLDLDKQDSHSWLALARLEARAGGVALRNHSNAAQSETDSDQQSLAPSAARGTEIARSIFKQGLDQCPNSIHLIQAWAVLEHRCGNRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXEKGLRACKTAGNQSSAA----------------IFRSXXXXXXXXXXXXXXXXXXXKAIATQPRMTEAYVALGRLEARRGGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVNEARKLLKKGHDCHPTDPAILQSLGTLEERCGNLDEAKRLFYRSVCARPIAPAFVAWALL 640          
BLAST of mRNA_A-nodosum_M_contig87.12.12 vs. uniprot
Match: A0A835Z4V8_9STRA (PsbB mRNA maturation factor Mbb1, chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.830e-14
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0
Query:  748 ARRIFELGIAADPAHGPLYNAYGTMEAKIGNVDHARDVYERGIAARCCGMASVWQGL 804
            ARR+FELGI ADP HGPLYNAYG  EA+ G+VD AR V+ RG+AA C  MASVW GL
Sbjct:  445 ARRLFELGIRADPKHGPLYNAYGATEARWGDVDAARAVFRRGVAAHCTDMASVWHGL 501          
BLAST of mRNA_A-nodosum_M_contig87.12.12 vs. uniprot
Match: R7Q4Y4_CHOCR (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y4_CHOCR)

HSP 1 Score: 87.0 bits (214), Expect = 1.420e-13
Identity = 118/333 (35.44%), Postives = 162/333 (48.65%), Query Frame = 0
Query:  301 ILEEALNLDAQDGHSWLLLAKTWERRGRV------------------DAARDA---FKRATAACPENVHLWQSWGMLEDKFGDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDILKSSRPKAAIASALGELEATRGDLEGARREFQKGLACLEKAGGERASSRRKPGDREAAEDPAEILVAWARLEEQLGGDLDRATQLLEKAQEGDPYDVKIHIERARFEMRRGDMNSARLILSRAANLPQKAGN-LFNMWATLE-TKEGNLDTALKIAKAATDRFPQDKSLLQTLGTVHGKLGQHAEAIECYRRSIAVRPAAPAYVAWALI 610
            +  + L LD  D HSWL LA+   R G V                  + A++A   F+     CP++VHL Q+W +LE + GD    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +    A                            L+       SS             + +   WA +EE++G DL RA +LL KA    P+  + ++  A+ E RR     A  +++ AA L  K    +FN WA +E    G +D A  I +      P+D +LLQ+LG +  K G+   A + + +S+ V+PA PA+VAWAL+
Sbjct:  130 LYRDCLALDRGDAHSWLALARLEARVGGVNLRVGSDAKEITEKQSHAEGAKEAKRLFEEGLRECPDSVHLLQAWAVLEHRCGDRDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTLQVGAHXXXXXXXXXXXXXXXXXXXXXXXXXXGLKNCRSSEGSS------------ASNLWRNWAEMEERIG-DLPRARELLSKAITSQPHFTESYVALAKLEARRSCTTRALELIATAAGLSAKPPPAVFNAWAQIEWAYRGKVDEARSILQRGHMMHPKDPALLQSLGILEDKCGKTEVARKLFYKSVCVKPAGPAFVAWALL 449          
BLAST of mRNA_A-nodosum_M_contig87.12.12 vs. uniprot
Match: A0A448Z6G4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6G4_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.280e-11
Identity = 133/530 (25.09%), Postives = 211/530 (39.81%), Query Frame = 0
Query:  297 EAIKILEEALNLDAQDGHSWLLLAKTWERR--GRVDAA-------RDAFKRATAACPENVHLWQSWGMLEDKF-GDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDILK------SSRPKAAIASALGELEATRGDLEGARREFQKGLACLEK----AGGERASSRRKPGDREAAEDPAEILVAWARLEEQLGGDLDRATQLLEKAQEGDPYDVKIHIERARFEMR--RGDMNSARLILSRAANLPQKAGNLFNMWATLETKEGNLDTALKIAKAATDRFPQDKSLLQTLGTVHGKLGQ-HAEAIECYRRSIAVRPAAPAYVAWALIVAKLADRAARKQSSKSAEEASDDDGDDFRLLGDDNVHASRRAGTARVLLADGIFNGDAATSGSAYSTESSILMDLAPTPPPSSEALDDVRSQAAPSNTLISTSTSVTARGSESSGRDRRGGRLVEGKRADDGASYQEARRIFELGIAADPAHGPLYNAYGTMEAKIGNVDHARDVYERGIAARCCGMASVWQG 803
            EA  +LE+ L  + +D HS L LA+   RR  G+ + A       ++AF R T ACP N+ L Q+W + E +  GD                                        +LK      S++  AA+   LGE+  + G+L  AR  ++  +  +E     A G     +R+       +D  E+ +A A LEE+   +L  A  LL KA    P     ++  AR E R   GD++      S ++  P+       +     T+E N+ TA ++A    +        L   GT   K  Q +A+    +   IA       + A A +  K       ++  K A+E      D +    D N+  +  AG     L      G+   +   Y  ES  L   APT    + AL +++    P+ T   T+                    ++ K     A++   R +FE  +  DP +GP YNAYG  EA+ GN++ AR +++RG  A C   AS++ G
Sbjct:  200 EAQNLLEQILQNNPKDSHSHLALARLLSRREGGKAEIAGVTQTKAQEAFARGTQACPRNIFLLQAWAIYEHQTRGDLIRARELFEECIEIDSYNPFVAHAYSLMERQLGRDGAAISLLKHVLEAPSAKVTAALVCTLGEIYISAGNLTEARDLYKHHIDAVENYSSSAVGGSMDRKRRRRHLPTEKDRVEVYLAAAWLEERHFSELRSAQDLLRKALAISPTSSLANVALARLEGRIQAGDLSLEGQTPSSSS--PRGTKQRSRVRRHNSTEEANIATAKRLATICDE--------LHQRGTESKKRQQKNAKHNPQHDGKIAANEDGRVFNALATLEVK-------RRRFKEAQEVLRKGMDLYPF--DHNLFTA--AGKVEERL------GNYTRARDMY-MESLRLEPSAPTLV--AFALLELKHPQYPTTTSTETT--------------------IDKKHVLKMANFTLIRGLFEEALLLDPRNGPAYNAYGNAEARRGNLEEARSIFDRGTQANCSDAASIYHG 679          
BLAST of mRNA_A-nodosum_M_contig87.12.12 vs. uniprot
Match: A0A7S4ERE6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ERE6_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.940e-10
Identity = 138/550 (25.09%), Postives = 213/550 (38.73%), Query Frame = 0
Query:  297 EAIKILEEALNLDAQDGHSWLLLAKTWERR-GR-----------------VDAARDAFKRATAACPENVHLWQSWGMLEDKF-GDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDILK------SSRPKAAIASALGELEATRGDLEGARREFQKGLACLEKAG--GERASS-------------RRKPGDREAAEDPAEILVAWARLEEQLGGDLDRATQLLEKAQEGDPYDVKIHIERARFEMR--RGDMNSARLILSRAANLPQKAGNLFNMWATLETKEGNLDTALKIAKAATD---RFPQDKSLLQTLGTVHGKLGQHAEAIECYRRSIAVRPAAPAYVAWALIVAKLADRAARKQSSKSAEEASDDDGDDFRLLGDDNVHASRRAGTARVLLADGIFNGDAATSGSAYSTESSILMDLAPTPPPSSEALDDVRSQAAPSNTLISTSTSVTARGSESSGRDRRGGRLVEGKRADDGASYQEARRIFELGIAADPAHGPLYNAYGTMEAKIGNVDHARDVYERGIAARCCGMASVW 801
            EA  +LE+ L  + +D HS L LA+   RR GR                 +  A++AF R T ACP N+ L Q+W + E +  GD                                        +LK      S++  AA+   LGE+  + G+L  AR  ++  +  +E     G R+S+             R  P ++    D  E+ +A A LEE+   +L  A   L KA    P     ++  AR E R   GD +SA         +P  +    + +    T+E N+ TA ++A    +   R  + K L+Q   T      QH +     ++   V       V  AL   +L     +K   K A E      D +    D N+  +  AG     L      G+   +   Y  ES  L   APT    + AL +++    P+ T   T+                    ++ K     A++   R +FE  +  DP +GP YNAYG  EA+ GN++ AR V++RG  A C   AS++
Sbjct:  191 EAQNLLEQILKKNPRDSHSHLALARLLARREGRQTQTSSSPQEEKSEAATLTRAQEAFSRGTKACPRNIFLLQAWAIYEQQTRGDLPRARELFEECLDIDSHNPYVCHAYGLMEKHLGRDAAAISLLKQVLEAPSAKVTAALVCTLGEIHISAGNLAEARDLYKHHIDIIENFSPDGSRSSTXXXXXXXXXXXXXRHLPTEK----DRVEVYLAAAWLEERHFSELRVARNFLRKALAISPTSSLANVALARLEGRIQSGDSSSA------PDGVPSSSRETNHKFRANNTEEANVKTAKRLATICDELHQRGMESKKLVQRKPTK-----QHRQ-----QQDTTVTTNEDGRVFNALATLEL-----KKHRFKEAREVLRKGMDLYPF--DHNLFTA--AGKVEERL------GNYTQARDMY-MESLRLEPSAPTLV--AFALLELKYPQYPTTTSTETT--------------------IDKKHVLKVANFTLIRGLFEEALLLDPRNGPAYNAYGNAEARRGNLEEARSVFDRGTQANCFDAASIY 682          
BLAST of mRNA_A-nodosum_M_contig87.12.12 vs. uniprot
Match: A0A7S1EU19_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EU19_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 4.450e-10
Identity = 105/346 (30.35%), Postives = 154/346 (44.51%), Query Frame = 0
Query:  276 KVKALYFRARDLLKRSPPAFKEAIKILEEALNLDAQDGHSWLLLAKTWER-RGRVDAARDAFKRATAACPENVHLWQSWGMLEDKFGDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----RDILKSSRPKAAIASALGELEATRGDLEGARREFQKGLACLEKAGGERASSRRKPGDREAAEDPAEILVAWA----RLEEQLGGDLDRATQLLEKAQEGDPYDVKIHIERARFEMRRGDMNSARLILSRAA-NLPQKAGNLFNMWATLETKEGNLDTALKIAKAATDRFPQDKSLLQTLGTVHGKLGQHAEAIECYRRSIAVRPAAPAYVAWALI 610
            KV   Y  A +L ++     K A  +LE+ + +D  D HSWL LA+   R       A   F+ A   CP+NVHL Q++G+ + + G F              XXXXXXXXXXXXXXXXXXXXXXX     + +  + +P+  +                    ++      +K+             RE+A D  E   AW                     LE+A +      +  +  ARF+ R G + +A   L  +     Q   N++N WATLE + GN++ A ++ + A + +P D SLL T G V  K   +  A + YRRS  V P +   V+WAL+
Sbjct:   89 KVVKNYTEALELFRQGKT--KAACGLLEQCIKMDPTDSHSWLALARFQSRLEPATTLAIQTFENAIINCPDNVHLLQAFGVEQGRRGHFDRARALFASAKDLQXXXXXXXXXXXXXXXXXXXXXXXXXXXFKSVKINKQPE--VCXXXXXXXXXXXXXXXXXXLYRAAFRATDKS------------YRESAMDRRERTKAWILRXXXXXXXXXXXXXXXXXXLEQALQHGKNRTETRMAIARFQARHGTVQAAVESLRESCLGREQATSNVYNGWATLEARAGNINRARELLREAHEMYPSDSSLLHTWGDVEQKDKNYEAARDLYRRSTNVAPRSMTLVSWALL 418          
BLAST of mRNA_A-nodosum_M_contig87.12.12 vs. uniprot
Match: W7TSL7_9STRA (PsbB mRNA maturation factor n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSL7_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 8.960e-10
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 0
Query:  748 ARRIFELGIAADPAHGPLYNAYGTMEAKIGNVDHARDVYERGIAARCCGMASVWQG 803
            AR++F LG+AADP+HGPLYNAYG ME KIGN+  A++V+  G+ A C  M SV  G
Sbjct:  511 ARKLFMLGMAADPSHGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHCPDMPSVLNG 566          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig87.12.12 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G1I2_ECTSI2.400e-10448.52PsbB mRNA maturation factor Mbb1, chloroplast n=1 ... [more]
A0A6H5L0Y9_9PHAE1.780e-8640.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2DH37_9STRA3.130e-1458.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2V3J326_9FLOR3.160e-1434.33PsbB mRNA maturation factor Mbb1, chloroplastic n=... [more]
A0A835Z4V8_9STRA4.830e-1470.18PsbB mRNA maturation factor Mbb1, chloroplast n=1 ... [more]
R7Q4Y4_CHOCR1.420e-1335.44TPR repeat-containing protein n=1 Tax=Chondrus cri... [more]
A0A448Z6G4_9STRA1.280e-1125.09Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4ERE6_9STRA1.940e-1025.09Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S1EU19_9RHOD4.450e-1030.35Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
W7TSL7_9STRA8.960e-1058.93PsbB mRNA maturation factor n=2 Tax=Monodopsidacea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 413..433
NoneNo IPR availablePFAMPF13432TPR_16coord: 842..900
e-value: 0.0022
score: 18.5
coord: 296..345
e-value: 2.5E-4
score: 21.5
coord: 1049..1090
e-value: 0.018
score: 15.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 722..740
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 681..740
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 699..721
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 777..810
e-value: 66.0
score: 9.4
coord: 1053..1085
e-value: 0.0099
score: 25.1
coord: 743..775
e-value: 4.9
score: 16.1
coord: 514..546
e-value: 3.0
score: 16.8
coord: 327..359
e-value: 0.0072
score: 25.5
coord: 480..512
e-value: 0.87
score: 18.6
coord: 949..981
e-value: 0.017
score: 24.3
coord: 915..947
e-value: 3.2E-6
score: 36.7
coord: 812..845
e-value: 80.0
score: 8.8
coord: 983..1015
e-value: 130.0
score: 7.3
coord: 272..304
e-value: 440.0
score: 3.3
coord: 361..393
e-value: 810.0
score: 1.4
coord: 881..913
e-value: 0.027
score: 23.7
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 534..567
e-value: 120.0
score: 5.3
coord: 1039..1072
e-value: 59.0
score: 8.2
coord: 935..968
e-value: 110.0
score: 5.9
coord: 411..444
e-value: 450.0
score: 0.5
coord: 568..601
e-value: 0.65
score: 19.0
coord: 347..380
e-value: 37.0
score: 9.9
coord: 833..866
e-value: 80.0
score: 7.0
coord: 867..900
e-value: 7.0
score: 15.6
coord: 277..312
e-value: 110.0
score: 5.8
coord: 901..934
e-value: 42.0
score: 9.5
coord: 313..346
e-value: 0.53
score: 19.3
coord: 798..831
e-value: 30.0
score: 10.8
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 571..599
e-value: 0.0031
score: 17.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 568..601
score: 9.7354
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 313..346
score: 8.1719
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 867..900
score: 9.1159
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 273..444
e-value: 6.3E-23
score: 83.3
coord: 962..1123
e-value: 3.3E-21
score: 77.7
coord: 838..961
e-value: 6.4E-26
score: 93.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 732..837
e-value: 5.2E-8
score: 35.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 465..633
e-value: 3.4E-19
score: 71.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 966..1097
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 294..445
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 801..992
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 744..825
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 415..572
IPR044624Tetratricopeptide-like repeat protein Mbb1-likePANTHERPTHR44917PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107coord: 415..612
coord: 297..404
coord: 740..999
coord: 988..1099

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig87contigA-nodosum_M_contig87:213538..238655 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig87.12.12mRNA_A-nodosum_M_contig87.12.12Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig87 209708..240408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig87.12.12 ID=prot_A-nodosum_M_contig87.12.12|Name=mRNA_A-nodosum_M_contig87.12.12|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1149bp
MWPAPPVQETVSAPRGNVSARDSGKSLRGGLQQRSSAGLSANVCGDGGSI
RGVRAGLGFLIMGDVARAYVSHSNYPTLYPPSGFRQGGAGRVRGRDVRST
AYSHGNGDCVDALGVVGKATRLRTPREGILFDGRRGLHRRRQGGDAASSL
RCTSHHHQQQQDCILTFQRGERVSGVPPSIASSRSALASLPGTGAATAPW
APAIAAPTSTTGRTKATMGSLVGGAWRRVGASPARPGTTLGTSAAGVGGG
GGGGRGNRLGVIKNAVGGGTAGKKVKVKALYFRARDLLKRSPPAFKEAIK
ILEEALNLDAQDGHSWLLLAKTWERRGRVDAARDAFKRATAACPENVHLW
QSWGMLEDKFGDFAMARRLFANGLEADPGNPFVCHAWGLMEQRDGDMDKA
RDILKSSRPKAAIASALGELEATRGDLEGARREFQKGLACLEKAGGERAS
SRRKPGDREAAEDPAEILVAWARLEEQLGGDLDRATQLLEKAQEGDPYDV
KIHIERARFEMRRGDMNSARLILSRAANLPQKAGNLFNMWATLETKEGNL
DTALKIAKAATDRFPQDKSLLQTLGTVHGKLGQHAEAIECYRRSIAVRPA
APAYVAWALIVAKLADRAARKQSSKSAEEASDDDGDDFRLLGDDNVHASR
RAGTARVLLADGIFNGDAATSGSAYSTESSILMDLAPTPPPSSEALDDVR
SQAAPSNTLISTSTSVTARGSESSGRDRRGGRLVEGKRADDGASYQEARR
IFELGIAADPAHGPLYNAYGTMEAKIGNVDHARDVYERGIAARCCGMASV
WQGLGALEASAGNQDRARKIFARGIRESSDDVSFLFHSLGSLELNAFRLE
DARAAFTEGIGRYPNNTQLLLGAALTETRMANIDEARDLFRRAVQADPSH
AHAWQAWGLMESRLGNYEIARSLWESGLKACPLHGPLWQAYAVMEESLGE
QERARKLFRAGLERCPEHVQLHQAWAVMEGKAGDLPLARQLVLDGLRADP
YHGALWTVYAMIERQQGSDAKARKACVMELGTRACPKHGSIFRSWGQMEF
QSGNIAESRRVFERGLKACPTYARLYYAYGDVEASLGNLDSLEELTLRGK
EALLSKGVSPRELQEFDAQMQAFATLARFDVRSSWEDRHTASDAFDVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR044624Mbb1-like