prot_A-nodosum_M_contig8694.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8694.1.1
Unique Nameprot_A-nodosum_M_contig8694.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length376
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig8694.1.1 vs. uniprot
Match: D7FV50_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV50_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 6.740e-98
Identity = 219/439 (49.89%), Postives = 255/439 (58.09%), Query Frame = 0 
Query:    8 GKMTRSSRTEA-NKAATRSANAG----GKLGSKVLQRLR-KPTDGEGKVLRTGSFRLKVPRAGARKAHGADTP-------ESAPR---VTRRDEREVLTMHTHGVQRPEGLKLRVVKASGRTLEETKFHMEIRTLRPGQVWSVCRRHEDFQKLHACLQRRFPALALPRLPRPPSGAG--VLDPATLERTRAGLQSYAAAIVADVPVAWGLEEFVMFLDSDEKGRRLFGKKR----------------------------------------------KKETRKVKGRSPVPEEQDSKSSREAGTRFSAFENSSRGSAHEEHEKTLLDIKVEEKKKAMAELEGEAQNHFEGVGAVINNDVSFSDDXXXXEDLGFDDDGEFIDGEEAIRAMLDRDAKETEDDNLFNIPAGTDFGAPLDDD-------DDFGDDDFDIDCHG 375
            GK  R+ R+ A N  A R ++ G    GK+GS V  RLR + TDG     R G+ +++ P +G                 E A R   + RRDEREV+TMHT GV RPEG+KLRVVKASGRTLE+TKFHMEIRTLRPGQVWSVCRR++DFQ LH+CLQ  FPAL LPRLPRPP+G G   L+PATLER RAGLQ+YAAA+V  VP AWGLEE VMFLDS+EKGRRLF                                                  K   RK     P         S +AGT    F            +K+LLD+KVEEKK A+A LEG A NHF+GVGAV+N  VSFS+D        F ++ +FIDGE+AIRAMLDRDA E EDDNLF+IPAGTDFG PLDD         D   D FDI  HG
Sbjct:  372 GKSKRAGRSNAGNNHAARGSSIGPVGEGKIGSNVFSRLRNRSTDGTHS--RYGNVKVRAPSSGXXXXXXXXXXXXXXXEDEYAQRSRVLLRRDEREVVTMHTPGVLRPEGVKLRVVKASGRTLEDTKFHMEIRTLRPGQVWSVCRRYKDFQSLHSCLQATFPALVLPRLPRPPTGGGGMALEPATLERARAGLQAYAAAVVGSVPAAWGLEELVMFLDSEEKGRRLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKPVARKAAAFPP------DLVSPKAGTPGVGF-----------GQKSLLDLKVEEKKLALAALEGAAANHFDGVGAVMNAAVSFSEDSDDDASQEFGEESDFIDGEDAIRAMLDRDADEAEDDNLFSIPAGTDFGIPLDDXXXXXXXXQDCSADAFDITYHG 791
[Close]
BLAST of mRNA_A-nodosum_M_contig8694.1.1 vs. uniprot
Match: A0A6H5JIG0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG0_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 1.070e-93
Identity = 182/339 (53.69%), Postives = 207/339 (61.06%), Query Frame = 0 
Query:   91 MHTHGVQRPEGLKLRVVKASGRTLEETKFHMEIRTLRPGQVWSVCRRHEDFQKLHACLQRRFPALALPRLPRPPSGAG--VLDPATLERTRAGLQSYAAAIVADVPVAWGLEEFVMFLDSDEKGRRLFGKKR-----------------------------------------------KKETRKVKGRSPVPEEQDSKSSREAGTRFSAFENSSRGSAHEEHEKTLLDIKVEEKKKAMAELEGEAQNHFEGVGAVINNDVSFSDDXXXXEDLGFDDDGEFIDGEEAIRAMLDRDAKETEDDNLFNIPAGTDFGAPLDDD-----DDFGDDDFDIDCHG 375
            MHT GV RPEG+KLRVVKASGRTLE+TKFHMEIRTLRPGQVWSVCRR++DFQ LH+CLQ  FPAL LPRLPRPP+G G   L+PATLER RAGLQ+YAAA+V  VP AWGLEE VMFLDS+EKGRRLF                                                   K   RK    +  P +  S  +   G  F               +K+LLD+KVEEKK A+A LEG A NHF+GVGAV+N  VSFS+D        F ++ +FIDGE+AIRAMLDRDA E EDDNLF+IPAGTDFG PLDD       D   D FDI  HG
Sbjct:    1 MHTPGVLRPEGVKLRVVKASGRTLEDTKFHMEIRTLRPGQVWSVCRRYKDFQSLHSCLQATFPALVLPRLPRPPTGGGGMALEPATLERARAGLQAYAAAVVGSVPAAWGLEELVMFLDSEEKGRRLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKPVARKG---AAFPPDLVSPKTGTPGVGFG--------------QKSLLDLKVEEKKLALAALEGAAANHFDGVGAVMNAAVSFSEDSDDGASQEFGEESDFIDGEDAIRAMLDRDADEAEDDNLFSIPAGTDFGIPLDDXXXXXXQDCSADAFDITYHG 322
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8694.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FV50_ECTSI6.740e-9849.89PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JIG0_9PHAE1.070e-9353.69PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 266..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..83
NoneNo IPR availableCDDcd06093PX_domaincoord: 129..208
e-value: 8.59362E-11
score: 56.5971
IPR001683Phox homologySMARTSM00312PX_2coord: 100..209
e-value: 0.0093
score: 25.2
IPR001683Phox homologyPFAMPF00787PXcoord: 127..208
e-value: 8.2E-11
score: 42.5
IPR001683Phox homologyPROSITEPS50195PXcoord: 97..212
score: 11.046166
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 101..230
e-value: 8.1E-16
score: 59.9
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 121..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8694contigA-nodosum_M_contig8694:15285..19418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8694.1.1mRNA_A-nodosum_M_contig8694.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8694 13114..19452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8694.1.1 ID=prot_A-nodosum_M_contig8694.1.1|Name=mRNA_A-nodosum_M_contig8694.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=376bp
MDKEIKRGKMTRSSRTEANKAATRSANAGGKLGSKVLQRLRKPTDGEGKV
LRTGSFRLKVPRAGARKAHGADTPESAPRVTRRDEREVLTMHTHGVQRPE
GLKLRVVKASGRTLEETKFHMEIRTLRPGQVWSVCRRHEDFQKLHACLQR
RFPALALPRLPRPPSGAGVLDPATLERTRAGLQSYAAAIVADVPVAWGLE
EFVMFLDSDEKGRRLFGKKRKKETRKVKGRSPVPEEQDSKSSREAGTRFS
AFENSSRGSAHEEHEKTLLDIKVEEKKKAMAELEGEAQNHFEGVGAVINN
DVSFSDDDDDDEDLGFDDDGEFIDGEEAIRAMLDRDAKETEDDNLFNIPA
GTDFGAPLDDDDDFGDDDFDIDCHG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683PX_dom
IPR036871PX_dom_sf