prot_A-nodosum_M_contig869.19.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig869.19.1
Unique Nameprot_A-nodosum_M_contig869.19.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length203
Homology
BLAST of mRNA_A-nodosum_M_contig869.19.1 vs. uniprot
Match: D7G122_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G122_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 8.240e-36
Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 0
Query:   60 LVEAAERTTVTVYANGFDERTSGFG-CSPSGCVAANTRDGA--TSTRWSCKVDLIDGKNCEITFEFDDAQDIALMRIAFYKGDERTRKLKVIVNSSSLVIIESSGTTDEFEVFAVNTDETKNLTLKALGLAGEEWISFKEVEFMV 201
            LV+A +RTTV  +AN +D+RTS +G C P GC A+ TRD +    +RWSC   L D + C+IT++F++ QDI  ++I FYKGDER R LK+  +      I SSGT+ ++E + +NTDETK L+++AL L  +EWIS  EV FMV
Sbjct:    4 LVDARKRTTVNKWANAYDDRTSEYGGCDPDGCKASLTRDQSWQDESRWSCSEKLEDAQ-CKITYKFEEPQDIVRIKIKFYKGDERVRTLKLKGSDGFEKTITSSGTSSKYETWDINTDETKWLSMEALNLDDDEWISITEVRFMV 147          
BLAST of mRNA_A-nodosum_M_contig869.19.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 7.330e-24
Identity = 66/167 (39.52%), Postives = 93/167 (55.69%), Query Frame = 0
Query:   52 QPVAPTEM-------LVEAAERTTVTVYANGFDER----TSGFGCSPSGCVAANTRDGA----TSTRWSCKVDLI-DGKNCEITFEFDDAQDIALMRIAFYKGDERTRKLKVIVNSSSLVIIES-SGTTDEFEVFAVNTDETKNLTLKALGLAGEEWISFKEVEFMV 201
            QPV+P E         VEA  +TTV V A  +D+R        GC   GC+     DG     T +RWSC  +++ DG  CEI+F FD  QDI  +++AF+KGDERTR LKV +N   +   ES  G+T  F  F +  +    +T++++G+  ++WIS  EV FMV
Sbjct:  236 QPVSPPEEEDDNNAEFVEAGSKTTVGVTATAYDDRPGESAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVTMESVGIDRDDWISLLEVRFMV 400          
BLAST of mRNA_A-nodosum_M_contig869.19.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.270e-20
Identity = 61/152 (40.13%), Postives = 82/152 (53.95%), Query Frame = 0
Query:   60 LVEAAERTTVTVYANGFDER----TSGFGCSPSGCVAANTRDGATS---TRWSCKVDLI-DGKNCEITFEFDDAQDIALMRIAFYKGDERTRKLKVIVNSSSLVIIES--SGTTDEFEVFAVNTDETKNLTLKALGLAGEEWISFKEVEFMV 201
            LV AA  T +   A GFDER    +   GC   GC+     DG T    +RWSC  D++ DG  CEI F F   Q++  +++ F+KG+ERTR LKV +N       +S     T  F+V A    +   +TL++LGL  +EWIS  EV FMV
Sbjct:  191 LVNAATITAIAASATGFDERPGQASGDHGCGKYGCLPVLATDGITDDVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKINGEKFGEFDSHPGSVTSYFDVIAY---DVHTVTLESLGLDTDEWISLLEVIFMV 339          
BLAST of mRNA_A-nodosum_M_contig869.19.1 vs. uniprot
Match: A0A6H5L4E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E8_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.410e-20
Identity = 58/141 (41.13%), Postives = 83/141 (58.87%), Query Frame = 0
Query:   60 LVEAAERTTVTVYANGFDERTSGFG-CSPSGCVAANTRDGA--TSTRWSCKVDLIDGKNCEITFEFDDAQDIALMRIAFYKGDERTRKLKVIVNSSSLVIIESSGTTDEFEVFAVNTDETKNLTLKALGLAGEEWISFKEV 197
            LV+A +RT V  +AN +D+RTS +G C P GC A+ TRD +    +RWSC   L D + C IT+ F++ QDI                +++ +N     II SSGT+  +E + +NTDETK L+++AL L  +EWIS  EV
Sbjct:  608 LVDARKRTAVKKWANAYDDRTSEYGGCDPDGCKASFTRDRSWKDESRWSCSEKLEDAQ-CNITYNFEEPQDI----------------VRIKINGEFKKIITSSGTSSTYETWDINTDETKWLSMEALNLDDDEWISITEV 731          
BLAST of mRNA_A-nodosum_M_contig869.19.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 2.360e-19
Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = 0
Query:   89 GCVAANTRDGA----TSTRWSCKVDLI-DGKNCEITFEFDDAQDIALMRIAFYKGDERTRKLKVIVNSSSLVIIES-SGTTDEFEVFAVNTDETKNLTLKALGLAGEEWISFKEVEFMV 201
            GC+     DG     T +RWSC  +++ DG  CEITF FD  QDI  +++AF+KGDERTR LKV +N   +   ES  G+T  F  F +  +    + ++++G+  ++WIS  EV FMV
Sbjct:    2 GCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVAMESVGIDADDWISLLEVRFMV 118          
BLAST of mRNA_A-nodosum_M_contig869.19.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 5.370e-19
Identity = 64/149 (42.95%), Postives = 85/149 (57.05%), Query Frame = 0
Query:   60 LVEAAERTTVTVYANGFDERT--SGFGCSPSGCVAANTRDG-ATS--TRWSCKVDLID-GKNCEITFEFDDAQDIALMRIAFYKGDERTRKLKVIVNSSSLVIIESSGTTDEFEVFAVNTDETKNLTLKALG-LAGEEWISFKEVEFMV 201
            +VEA+   TVTV A  +D     S  GCSP+GC+  NTRDG ATS  +RWSCK  L D G  C IT+       +  + IA YKGDERTR L++ +++    +  SSGTT +FE   V   +T    +  +G L   EW+S  EVE +V
Sbjct:   25 VVEASTLATVTVAAPLYDTTVTASDGGCSPTGCIGDNTRDGDATSVESRWSCKPALGDAGSVCRITYGLGIQYQLTGLNIAMYKGDERTRTLEINIDNLPYTVWTSSGTTTDFETIEV---DTMGRWIDIVGVLEDSEWLSIMEVEILV 170          
BLAST of mRNA_A-nodosum_M_contig869.19.1 vs. uniprot
Match: A0A3D9L3E1_MARFU (F5/8 type C domain-containing protein n=2 Tax=Marinoscillum furvescens TaxID=1026 RepID=A0A3D9L3E1_MARFU)

HSP 1 Score: 64.7 bits (156), Expect = 1.050e-8
Identity = 37/115 (32.17%), Postives = 59/115 (51.30%), Query Frame = 0
Query:   89 GCVAANTRDGATSTRWSCKVDLIDGKNCEITFEFDDAQDIALMRIAFYKGDERTRKLKVIVNS-----SSLVIIESSGTTDEFEVFAVNTDETKNLTLKALGLAGEEWISFKEVE 198
            G V  NT DG+ STRWS       G    ITF+   +QD++ +++A+YKGD+R+   K+ + +     S + +  SSG+T   E +   T   + + +   G +   W S  EVE
Sbjct:  193 GNVPENTLDGSLSTRWSAN-----GSGQYITFDLGSSQDVSSLKVAWYKGDQRSASFKIRLGNTTSSLSDVYVGNSSGSTLNLETYDFTTTNARYVRITGFGNSQNTWNSITEVE 302          
BLAST of mRNA_A-nodosum_M_contig869.19.1 vs. uniprot
Match: K4KM19_SIMAS (Uncharacterized protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) TaxID=1117647 RepID=K4KM19_SIMAS)

HSP 1 Score: 64.7 bits (156), Expect = 1.060e-8
Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 0
Query:   89 GCVAANTRDGATS--TRWSCKVDLIDGKNCEITFEFDDAQDIALMRIAFYKGDERTRKLKVIVNSSSL---VIIE--SSGTTDEFEVFAVNTDETKNLTLKALGLAGEEWISFKEVEF 199
            G VAANT DG+    +RWS +     G    + ++F  +Q    M IAFYKG+ERT + ++  +++     V+ +  SSG+T +FE FAV+    + L L  LG +  +W S  EV F
Sbjct:   35 GHVAANTLDGSLEPESRWSAQ-----GAGQYLQYDFGSSQIFGAMNIAFYKGNERTTQFQIATSANGTDWSVVYDGVSSGSTLDFEAFAVSGAAGRYLRLVGLGNSSNDWNSITEVSF 147          
BLAST of mRNA_A-nodosum_M_contig869.19.1 vs. uniprot
Match: A0A3M1H2G0_9CHLR (Discoidin domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1H2G0_9CHLR)

HSP 1 Score: 56.6 bits (135), Expect = 1.450e-6
Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = 0
Query:   86 SPSGCVAANTRDGATSTRWSCKVDLIDGKNCEITFEFDDAQDIALMRIAFYKGDERTRKLKVIVNS-----SSLVIIESSGTTDEFEVFAVNTDETKNLTLKALGLAGEEWISFKEVE 198
            S  G V ANT DG  +TRWS +     G    I F+    + ++ +RIAFYKGD+RT    + +++     + +   +SSG+T E E+F  +    + + +   G +  +W S  EVE
Sbjct:   63 SDDGNVPANTLDGDLNTRWSAQ-----GDGQWIQFDLGKVKTVSHLRIAFYKGDQRTTGFDIELSTDGESWTQVYSGQSSGSTTEPELFDFDDTPARYVRIIGHGNSKNDWNSLTEVE 175          
BLAST of mRNA_A-nodosum_M_contig869.19.1 vs. uniprot
Match: A0A3D1QUP6_9DELT (F5/8 type C domain-containing protein (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3D1QUP6_9DELT)

HSP 1 Score: 53.9 bits (128), Expect = 2.650e-5
Identity = 34/115 (29.57%), Postives = 57/115 (49.57%), Query Frame = 0
Query:   89 GCVAANTRDGATSTRWSCKVDLIDGKNCEITFEFDDAQDIALMRIAFYKGDERTRKLKVIVNS-----SSLVIIESSGTTDEFEVFAVNTDETKNLTLKALGLAGEEWISFKEVE 198
            G  AAN  DG   TRWSCK     G  C IT +  + + +  +R+A+Y+GDER+    V +++     + ++   S+G + E E +     E + + L   G    +W S  E++
Sbjct:   76 GNPAANAVDGDLQTRWSCK-----GAGCWITGDLGETRTVEELRVAWYRGDERSSGFAVSLSTDGDDFAEVLAGSSTGESLELEGYPFTPTEARFVRLTVNGNDQNQWASVTELQ 185          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig869.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G122_ECTSI8.240e-3648.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8U9_9PHAE7.330e-2439.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFX1_9PHAE1.270e-2040.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L4E8_9PHAE3.410e-2041.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCQ5_ECTSI2.360e-1941.18Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KL74_9PHAE5.370e-1942.95F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
A0A3D9L3E1_MARFU1.050e-832.17F5/8 type C domain-containing protein n=2 Tax=Mari... [more]
K4KM19_SIMAS1.060e-836.44Uncharacterized protein n=1 Tax=Simiduia agarivora... [more]
A0A3M1H2G0_9CHLR1.450e-632.20Discoidin domain-containing protein (Fragment) n=1... [more]
A0A3D1QUP6_9DELT2.650e-529.57F5/8 type C domain-containing protein (Fragment) n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.260coord: 65..201
e-value: 2.3E-8
score: 36.0
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 84..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig869contigA-nodosum_M_contig869:181551..182566 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig869.19.1mRNA_A-nodosum_M_contig869.19.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig869 180852..183824 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig869.19.1 ID=prot_A-nodosum_M_contig869.19.1|Name=mRNA_A-nodosum_M_contig869.19.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=203bp
MDCSQRASDAGLKSADCCVTRIRESGVYCDASKAAPCILNEGPTPEPSPA
PQPVAPTEMLVEAAERTTVTVYANGFDERTSGFGCSPSGCVAANTRDGAT
STRWSCKVDLIDGKNCEITFEFDDAQDIALMRIAFYKGDERTRKLKVIVN
SSSLVIIESSGTTDEFEVFAVNTDETKNLTLKALGLAGEEWISFKEVEFM
VI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf