prot_A-nodosum_M_contig867.6.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig867.6.1
Unique Nameprot_A-nodosum_M_contig867.6.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length105
Homology
BLAST of mRNA_A-nodosum_M_contig867.6.1 vs. uniprot
Match: A0A6H5JS19_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS19_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 2.280e-28
Identity = 55/101 (54.46%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    3 IRRYSRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRVLEITQCESIETTLRTRRLLWAETL 103
            IRRY ++L+D+P     LKTR+++AEA+EALLYGC TW  RQ+ Y  LRT+HHR+LLR+IG QR++  +R  SY + L+   C+S+ETT+R RRLL+A  L
Sbjct:  294 IRRYGQDLFDKPNAPFRLKTRLLQAEAMEALLYGCMTWAPRQDQYRTLRTIHHRLLLRVIGYQREKGTYRQLSYAQTLKRVGCQSVETTIRQRRLLFAGAL 394          
BLAST of mRNA_A-nodosum_M_contig867.6.1 vs. uniprot
Match: A0A6H5JAH7_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH7_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 4.070e-28
Identity = 53/101 (52.48%), Postives = 74/101 (73.27%), Query Frame = 0
Query:    3 IRRYSRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRVLEITQCESIETTLRTRRLLWAETL 103
            +RRY REL+D+P+    LK R+++AEA+EALLYGC TW+    HY  LR++HHR+LLR+IG +RK+  +R  SY + L   +CES+E T+R RRLL+A  L
Sbjct:  106 LRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLRRVECESVEPTIRQRRLLFAGAL 206          
BLAST of mRNA_A-nodosum_M_contig867.6.1 vs. uniprot
Match: A0A6H5KLX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX9_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.300e-27
Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    3 IRRYSRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRVLEITQCESIETTLRTRRLLWA 100
            IRRY+ EL+D+P     LK R+++AEA+EALLYGC TW+ R+ HY  L+T HHR+LLR+IG +RKR  +R  SY + L+   C+S+E T+R RRLL+A
Sbjct:  136 IRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFA 233          
BLAST of mRNA_A-nodosum_M_contig867.6.1 vs. uniprot
Match: A0A6H5JLH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH5_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.410e-27
Identity = 52/98 (53.06%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    3 IRRYSRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRVLEITQCESIETTLRTRRLLWA 100
            I+RY+ EL+D+P     LK R+++AEA+EALLYGC TW+ R+ HY  L+T HHR+LLR+IG +RKR  +R  SY + L+   C+S+E T+R RRLL+A
Sbjct:   85 IKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFA 182          
BLAST of mRNA_A-nodosum_M_contig867.6.1 vs. uniprot
Match: A0A6H5KN66_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN66_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 3.310e-27
Identity = 53/101 (52.48%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    3 IRRYSRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRVLEITQCESIETTLRTRRLLWAETL 103
            +RRY +EL+D+P+    LKTR+++AEA+EALLYGC TW  RQ+ Y  LRT+HHR+LLR++G QR +  +R  SY + L+   C+S+E+T+R RRLL+A  L
Sbjct:  671 VRRYGQELFDRPRAPFRLKTRLLQAEAMEALLYGCMTWAPRQDQYRTLRTIHHRLLLRVVGYQRMKCTYRQLSYAQTLKRVGCQSVESTIRQRRLLFAGAL 771          
BLAST of mRNA_A-nodosum_M_contig867.6.1 vs. uniprot
Match: A0A6H5K7C7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7C7_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 4.370e-27
Identity = 52/98 (53.06%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    3 IRRYSRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRVLEITQCESIETTLRTRRLLWA 100
            IRRY+ EL+D+P     LK R+++AEA+ ALLYGC TW+ R++HY  L+T HHR+LLR+IG +RKR  +R  SY + L+   C+S+E T+R RRLL+A
Sbjct:   85 IRRYATELFDRPGAPFRLKARLLQAEAVAALLYGCMTWSPRRDHYRLLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFA 182          
BLAST of mRNA_A-nodosum_M_contig867.6.1 vs. uniprot
Match: A0A6H5JWS4_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS4_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 6.410e-27
Identity = 52/98 (53.06%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    3 IRRYSRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRVLEITQCESIETTLRTRRLLWA 100
            I+RY+ EL+D+P     LK R+++AEA+EALLYGC TW+ R+ HY  L+T HHR+LLR+IG +RKR  +R  SY + L+   C+S+E T+R RRLL+A
Sbjct:  104 IKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFA 201          
BLAST of mRNA_A-nodosum_M_contig867.6.1 vs. uniprot
Match: A0A6H5JBT6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT6_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.570e-26
Identity = 51/101 (50.50%), Postives = 75/101 (74.26%), Query Frame = 0
Query:    3 IRRYSRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRVLEITQCESIETTLRTRRLLWAETL 103
            +RRY REL+D+P+    LK R+++AEA++ALLYGC TW+    HY  LR++HHR+LLR+IG +RK+  +R  SY + L+  +C+S+E T+R RRLL+A  L
Sbjct:  250 LRRYGRELFDRPQAPFRLKIRLLQAEAMDALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGAL 350          
BLAST of mRNA_A-nodosum_M_contig867.6.1 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.590e-26
Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 0
Query:    3 IRRYSRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRVLEITQCESIETTLRTRRLLWAETL 103
            +RRY REL+D+PK    LK R+++AEA+EALLYGC TW+    HY  LR++HHR+L R+IG + K+  +R  SY R LE  +C+S+E T+R RRLL+A  L
Sbjct:  369 LRRYGRELFDRPKAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLFRVIGYKLKKDTYRQLSYPRTLERVECQSVEATIRQRRLLFAGAL 469          
BLAST of mRNA_A-nodosum_M_contig867.6.1 vs. uniprot
Match: A0A6H5KA81_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA81_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.930e-26
Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    3 IRRYSRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRVLEITQCESIETTLRTRRLLWA 100
            IRRY+ EL+D+P     LK R+++AEA+EALLYGC TW+ R+ HY  L+T HHR+LLR+IG +RKR  +R  SY + L+   C+S+E T+R RRLL+A
Sbjct:  387 IRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFA 484          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig867.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JS19_9PHAE2.280e-2854.46Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JAH7_9PHAE4.070e-2852.48Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KLX9_9PHAE1.300e-2754.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLH5_9PHAE1.410e-2753.06Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN66_9PHAE3.310e-2752.48Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K7C7_9PHAE4.370e-2753.06Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JWS4_9PHAE6.410e-2753.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JBT6_9PHAE1.570e-2650.50Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLT1_9PHAE1.590e-2652.48Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KA81_9PHAE1.930e-2654.08Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig867contigA-nodosum_M_contig867:93532..93846 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig867.6.1mRNA_A-nodosum_M_contig867.6.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig867 93148..107788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig867.6.1 ID=prot_A-nodosum_M_contig867.6.1|Name=mRNA_A-nodosum_M_contig867.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=105bp
MHIRRYSRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHYAKL
RTVHHRVLLRIIGAQRKRPDHRMTSYNRVLEITQCESIETTLRTRRLLWA
ETLL*
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