prot_A-nodosum_M_contig867.29.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig867.29.2
Unique Nameprot_A-nodosum_M_contig867.29.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length311
Homology
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BLAST of mRNA_A-nodosum_M_contig867.29.2 vs. uniprot
Match: A0A6H5KD18_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD18_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 6.080e-58
Identity = 141/321 (43.93%), Postives = 181/321 (56.39%), Query Frame = 0 
Query:   32 AAGWWSPGGERAGQPFFPPPSEAGGDEENVA--LRALEQKQFWGEVERVGLETLEDEVVEKKRGQLIAGVAKACSVGAQITFIMGVGGLLFRLLPVLLGHDVENEEIDEAKSSLLLQ------------PGTGRRPQALSAVKSRFFLM-------DGDAAGGAPARQGAEGNGAVVTAR---------------------RGELVEGGPEDCEVVVFEERRAILGKVRRLSRPFLRAMALSLAALLAARLFLGDLLAARIDPTIELLFSDDVVNTYAEKVDIPDDDDPLPFSQDADDVPGRKKMKGRSVQRPPRPEGGHG 310
            AAG W  GG RAG+ F  P    G D++++A      +++QFW +VE  G+E LE+EV EKK  ++ A VA+ACSVGAQ+T IMG G LLFRLLPVLLGHD++++E D+A +  LLQ               GRR   L++V +    +       +GD          AEG G                            GE V     D +VVV    R  L K RRLSRPFL+AMA  LA LL ARL LG +LA RIDPT+ELLF DDV++ Y+    + +  D +PF++DA DVPGRKKMKG+ VQR PRP+G  G
Sbjct:   70 AAGSWGLGGGRAGRGF--PVGSDGPDDDDMAEVFAKFQEEQFWEDVEYAGMEVLEEEVAEKKTKEIFAQVARACSVGAQMTLIMGGGALLFRLLPVLLGHDLDDDEGDDANTPYLLQLDDHRPQQASLDAARGRRQPLLTSVPNEDAAVRLHGEETEGDGTAVVVGLAAAEGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEVG----DVDVVVETRLRVSLRKARRLSRPFLKAMAPPLALLLVARLALGTVLARRIDPTLELLFGDDVMDLYSTNKKVINKVD-MPFAKDAQDVPGRKKMKGKGVQRQPRPDGEEG 383
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig867.29.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KD18_9PHAE6.080e-5843.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig867contigA-nodosum_M_contig867:252559..264297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig867.29.2mRNA_A-nodosum_M_contig867.29.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig867 252054..264419 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig867.29.2 ID=prot_A-nodosum_M_contig867.29.2|Name=mRNA_A-nodosum_M_contig867.29.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=311bp
MPSPVCRRCMPSRSIKSAATAYLFVSTASMAAAGWWSPGGERAGQPFFPP
PSEAGGDEENVALRALEQKQFWGEVERVGLETLEDEVVEKKRGQLIAGVA
KACSVGAQITFIMGVGGLLFRLLPVLLGHDVENEEIDEAKSSLLLQPGTG
RRPQALSAVKSRFFLMDGDAAGGAPARQGAEGNGAVVTARRGELVEGGPE
DCEVVVFEERRAILGKVRRLSRPFLRAMALSLAALLAARLFLGDLLAARI
DPTIELLFSDDVVNTYAEKVDIPDDDDPLPFSQDADDVPGRKKMKGRSVQ
RPPRPEGGHG*
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