prot_A-nodosum_M_contig865.33.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig865.33.3
Unique Nameprot_A-nodosum_M_contig865.33.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length805
Homology
BLAST of mRNA_A-nodosum_M_contig865.33.3 vs. uniprot
Match: D8LIG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG0_ECTSI)

HSP 1 Score: 394 bits (1012), Expect = 1.990e-119
Identity = 225/463 (48.60%), Postives = 287/463 (61.99%), Query Frame = 0
Query:   59 EGKSRCEQCRQRDAACTFSVKGKTGPKPRGYRSKP-GTSRYKHRKT------MRGFRRESSAYFAEADASTHSESENPP-------ECHGNVVAT----------PVAGETLTGRRERCLLGIYIRSIGNFLPLVEPEVLVKGLQERQRLPQVMATAFGADPLSYVQAQVAGAISLGALISGDLPTARTYHNTLNYHNNAHISTLIDPVTAPSLGLGTLYWQYLGENQLKDYWLRQTRRVLCKAKDVPIDLVLCIEYLNDYSRETYERPGIETMAPGRRTLHTISCLLANMYHVLNPVGGKPTAVTFCGHLSECIRDLKHEAAAELALLLCTSLQALLLVMIGHRPAAIEMLSAIPHLLAPQSDGTPSVARALPLCWDAVVIAAALSFLLGQDHIYRQLRFTVDSANDISPAARWAFCLPDPDSDPHSFIGHECHSTSNICTILSNIAHRTRFGIVPFYLDDQ 497
            EG++RCEQC QRD  C FS K KTGPKP+  ++K  G +R+K + +      +RG  R  S       AS H  S           E  G+  A+          PV   T    RER  L ++I ++G  +PLV  EVL   L+ERQRLPQ MATA GAD ++  QAQV GAISLGALISGD   A  Y+ +L YH    ++ L      PSL L  LYWQ+ GE++LK  W+   RRVL   + +P +LVL IEYL DY+RE + RPG+E M    R LH+ISCLLANM  ++NP  G+  A+  C  LS CI  L++E + EL LLLCTSL+ALLL M+G R AA ++L  IP L+   S G PSV RALPL WDA++IA+ALSFLLGQ   Y++LR  V+ A D+   ARW FCLP+P SDP +++ HEC+S+SNIC I+  IA RT FG  PFY D+Q
Sbjct:    3 EGETRCEQCIQRDTNCVFSTKAKTGPKPKSAKAKAEGATRHKGKSSRSSARRVRGASRVPSVLPRRGSASGHGSSXXXXXXSFPGFEAIGDSFASRAVAAPTAQPPVEAGTAAAGRERLYLSVFIGTVGKLVPLVREEVLSVALRERQRLPQDMATAVGADLVACEQAQVVGAISLGALISGDQEAAHAYYLSLRYHLG-DVNGLTGVGVVPSLALVALYWQHRGEDELKIEWVGHARRVLANVQSIPANLVLSIEYL-DYAREAHPRPGVELMPSSHRALHSISCLLANMPAIVNPAVGRAAAIGSCEELSICILGLRNETSVELTLLLCTSLRALLLAMLGQRDAATDVLDTIPSLVDVGSGGNPSVVRALPLSWDALLIASALSFLLGQGATYQRLRSAVELATDVPAEARWTFCLPEPGSDPQAYVVHECNSSSNICNIMCEIASRTNFGAQPFYSDEQ 463          
BLAST of mRNA_A-nodosum_M_contig865.33.3 vs. uniprot
Match: A0A6H5JAW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW1_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 8.920e-67
Identity = 149/358 (41.62%), Postives = 189/358 (52.79%), Query Frame = 0
Query:  140 PVAGETLTGRRERCLLGIYIRSIGNFLPLVEPEVLVKGLQERQRLPQVMATAFGADPLSYVQAQVAGAISLGALISGDLPTARTYHNTLNYHNNAHISTLIDPVTAPSLGLGTLYWQYLGENQLKDYWLRQTRRVLCKAKDVPIDLVLCIEYLNDYSRETYERPGIETMAPGRRTLHTISCLLANMYHVLNPVGGKPTAVTFCGHLSECIRDLKHEAAAELALLLCTSLQALLLVMIGHRPAAIEMLSAIPHLLAPQSDGTPSVARALPLCWDAVVIAAALSFLLGQDHIYRQLRFTVDSANDISPAARWAFCLPDPDSDPHSFIGHECHSTSNICTILSNIAHRTRFGIVPFYLDDQ 497
            PV   T     ER  L ++I ++G  +PLV  EVL   L+ERQRLPQ MATA GA+ ++  QAQV GAISLGALISGD   A  Y+ +L YH    +++L      PSL L  LYWQ+ GE++LK  W+   RRVL                                                                               + + EL LLLCTSL+ALLL M+G R AA ++L  IP L+   S G PSV RALPL WDA++IA+ALSFLLGQ   Y++LR  V+ A D+   ARW FCLP+P SDP +++ HEC+S+SNIC I+  IA RT FG  PFY D+Q
Sbjct:  116 PVEAGTAAADHERLYLSVFIGTVGKLVPLVREEVLSVALRERQRLPQDMATAVGANLVACEQAQVVGAISLGALISGDQEAAHAYYLSLRYHLG-DVNSLTGVGVVPSLALVALYWQHRGEDELKIEWVGHARRVLANV----------------------------------------------------------------------------QTSVELTLLLCTSLRALLLAMLGQRDAATDVLDTIPSLVDVGSGGNPSVVRALPLSWDALLIASALSFLLGQGATYQRLRSAVELATDVPAEARWTFCLPEPGSDPQAYVVHECNSSSNICNIMCEIASRTNFGAQPFYSDEQ 396          
BLAST of mRNA_A-nodosum_M_contig865.33.3 vs. uniprot
Match: A0A835ZC43_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC43_9STRA)

HSP 1 Score: 221 bits (564), Expect = 5.290e-57
Identity = 176/542 (32.47%), Postives = 238/542 (43.91%), Query Frame = 0
Query:   33 QSGARGRSLRSACNFCHEKRVKCVTTEGK---SRCEQCRQRDAACTFSVKGKTGPKPRGYRS--KPGTSRYKHRKTMRGFRRESSAYFAEADASTHSESENPPECHGN-------------------------------------------------------------------------VVATPVAGETLTGRRERCLLGIYIRSIGNFLPLVEPEVLVKGLQERQRLPQVMATAFGADPLSYVQAQVAGAISLGALISGDLPTARTYHNTLNYHNNAHISTLIDPVTAPSLGLGTLYWQYLGENQLKDYWLRQTRRVLCKAKDVP-IDLVLCIEYLNDYSRETYERPGIETMA--PGRRTLHTISCLLANMYHVLNPVGGKPTAVTFCGHLSECIRDLKHEAAAELALLLCTSLQALLLVMIGHRPAAIEMLSAIPHLLAPQSDGTPSVARALPLCWDAVVIAAALSFLLGQDHIYRQLRFTVDSANDISPAARWAFCLPDPDSDPHSFIGHECHSTSNICTILSNIAHRTRFGIVPFY 493
            Q G   R LRSAC++CH KR+KC   + +    RC+QC +R+  C FS K KTGPKP+  RS  +PG      R++              A     S    PP                                                                              V A P+A        ER  L  Y+ ++   LP      L   L  R R P   A+       S  QAQ+AGA+++GALI GD   A  YH     H  A  S    P  A  L +   YWQY G++  K  +LR  R  L +A  VP ++L LC+E+L DY  ET  RP  +  A  P  R LHT+SC+LA++  ++ P  G   A+ +C  L++C   L     A L  LLC +L + LLVM+G R  A   LS +P +L    D  P   RALPL WDA +IAA LSFLL  +  Y +L   V+ A + + A +W   LP P + P  ++GH C STSNIC+++  + H T+ G+  FY
Sbjct:   24 QGGTSPRLLRSACDWCHTKRIKCKRDDSEPLGGRCQQCVRRNIECKFSYKEKTGPKPKIARSGKEPGGXXXXVRQSS-------------ASPGARSAQLRPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGALPMAPSEQVAL-ERVFLRTYLSTVSTLLPFCVELPLADALAARARAPGGPASVAS----SVAQAQLAGALAVGALIRGDR-VAEAYHAAARAHLKALFSAP-SPEAASVLCMLAFYWQYRGDDDKKGVYLRHARLGLDRAGAVPPLELQLCMEHL-DY--ETAGRPVRDARALPPRLRALHTVSCVLADIQDLMEPSAGPAPALAYCAQLADCSAALG--TGAGLPALLCAALHSFLLVMLGRRADAAAALSRVPDVL----DACPDAPRALPLSWDAALIAATLSFLLRLEATYARLHAAVERAQNATAATQWTCRLPAPGAPPAQYLGHACRSTSNICSVICKVGHHTQCGMHSFY 536          
BLAST of mRNA_A-nodosum_M_contig865.33.3 vs. uniprot
Match: A0A835YH07_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH07_9STRA)

HSP 1 Score: 150 bits (380), Expect = 6.110e-34
Identity = 137/490 (27.96%), Postives = 209/490 (42.65%), Query Frame = 0
Query:   38 GRS-LRSACNFCHEKRVKCVTTEGKSRCEQCRQRDAACTFSVKGKTGPKPRGYRSKPGTSRYKHRKTMRGFRRESSAYFAEADASTHSESENPPECHGNVVATPVAGETLTGRRERCLLGIYIRSIGNFLPLVEPEVLVKGLQERQRLPQVMATAFGADP--LSYVQAQVAGAISLGALISGDLPTARTYHNTLN-------------------YHNNAHISTLIDPVTAPSLGLGTLYWQYLGENQLKDYWLRQTRRVLCKAK--DVPIDLVLCIEYLN-DYSRETYERPGIETM-----APGRRTLHTISCLLANMYHVLNPVGGKPTAVTFCGHLSECIRDLKHEAAAELALLLCTSLQALLLVMIGHRPAAIEMLSAIPHLLAPQSDGTPSVARALPLCWDAVVIAAALSFLLGQDHIYRQLRFTVDSANDISPAARWAFCLPDPDSDPHSFIGHEC----HSTSNICTILSNIAHRTRFGIVPFY 493
            GRS LR+AC++CH KR+KC  T+G  +C+QC QR   C FSVK KTGPKP+      G  +                     +A+  +    PP     V+  P          E   L  Y  ++   LPL +PE L   +  R  L   +       P        Q+  A+++GAL+      A  Y  T                                    A    +  LYW  +G+   +D  LR++  +L  +   +  + L +CIE+L+ + + E +  P    +     AP    L  ++C+L ++  ++   GG+  AV +   L+     ++ E    L  L C +LQALLL+++G    A   ++A+P LL    D  P VAR LPL WD  V+AAA +F+LG +  Y  L   V+ A   + A +WA  LP P+     +I H C     S  N+C ++S  A  T+ G    Y
Sbjct:   57 GRSQLRNACDWCHSKRIKCRHTDG-PKCQQCLQRGLECKFSVKEKTGPKPKVITHNKGQQQTPPXXXXXXX------XXXXXNAAASASRAQPPVV--TVLGAPPVPSATQQALEWGFLRAYATTVTRLLPLGDPEALHASMLMRAELHATLQLLHAPPPPRAPVPDGQLMAALAVGALVCNQPLAAEAYAATARSCAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAELRCMLALYWHCVGDADARDAQLRESALLLQGSAWTEGNVALRMCIEHLDANRAAEAHAPPPSTALRFPPCAPALSVLGLVTCVLRDIPELMASTGGELAAV-YARQLAGRALVVEAEEGHALPALACRALQALLLMLLGRLADATAAVAAVPPLL----DANPLVARCLPLAWDMAVLAAATAFVLGCNADYVALHRAVEWAQGATAATQWACRLPSPECPLRLWISHTCARAPQSCLNVCDVVSQAAIVTQCGAQCMY 532          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig865.33.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LIG0_ECTSI1.990e-11948.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAW1_9PHAE8.920e-6741.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZC43_9STRA5.290e-5732.47Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A835YH07_9STRA6.110e-3427.96Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 39..85
e-value: 0.0078
score: 23.8
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 44..74
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 44..76
score: 8.874
IPR001138Zn(2)-C6 fungal-type DNA-binding domainCDDcd00067GAL4coord: 42..77
e-value: 1.5638E-5
score: 40.3394
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 43..126
e-value: 3.4E-5
score: 26.1
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 38..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 767..787
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 762..804
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig865contigA-nodosum_M_contig865:195234..206756 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig865.33.3mRNA_A-nodosum_M_contig865.33.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig865 195018..208048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig865.33.3 ID=prot_A-nodosum_M_contig865.33.3|Name=mRNA_A-nodosum_M_contig865.33.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=805bp
MTTAPDTETISSQNGTSQNISPARGVSQDCTLQSGARGRSLRSACNFCHE
KRVKCVTTEGKSRCEQCRQRDAACTFSVKGKTGPKPRGYRSKPGTSRYKH
RKTMRGFRRESSAYFAEADASTHSESENPPECHGNVVATPVAGETLTGRR
ERCLLGIYIRSIGNFLPLVEPEVLVKGLQERQRLPQVMATAFGADPLSYV
QAQVAGAISLGALISGDLPTARTYHNTLNYHNNAHISTLIDPVTAPSLGL
GTLYWQYLGENQLKDYWLRQTRRVLCKAKDVPIDLVLCIEYLNDYSRETY
ERPGIETMAPGRRTLHTISCLLANMYHVLNPVGGKPTAVTFCGHLSECIR
DLKHEAAAELALLLCTSLQALLLVMIGHRPAAIEMLSAIPHLLAPQSDGT
PSVARALPLCWDAVVIAAALSFLLGQDHIYRQLRFTVDSANDISPAARWA
FCLPDPDSDPHSFIGHECHSTSNICTILSNIAHRTRFGIVPFYLDDQSFT
HPLPILVMLTNRQQGEGCHSGFHSSVFGEDCMALGNVPPNDRDLLEENGH
RLLKGLHSMSPSRLSFPLSPGGGVMAGGMLEKRPLERIPSEGAMDLIDSS
LGGLHGDIGRGRGISQCMELSNGAGNPGFIDGGKRYPTQCLSSFKTSSSL
LCHTKSTRHDRDWREGAEDICGDGGDDGGHGTAAPCDDLGRELVVTLDGF
GDDDDTFENIMSVEAMLEHIEVESDINGGIGEEGSTSLGGHFDTAKRFRR
VVGEVGARLLEKRQGVGNPPTISQRDNPSSDIKSSPASHATIGGVAVNDG
PEIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf