prot_A-nodosum_M_contig8641.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8641.2.1
Unique Nameprot_A-nodosum_M_contig8641.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length580
Homology
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BLAST of mRNA_A-nodosum_M_contig8641.2.1 vs. uniprot
Match: D8LQB1_ECTSI (INCENP_ARK-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB1_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.350e-15
Identity = 105/217 (48.39%), Postives = 123/217 (56.68%), Query Frame = 0 
Query:  205 GFGSPGRLRT-FTAKTPSRKVNPYAKGSKSTPGPSGLKVGVHEALNNVKPSTPTTAASGGNETETPTSGSSARDAFAKFRAMDSNSKNGG---PSFKLRSTALFKTASPTKHGNSHLMPPPSHKLDLTSSFSGSRAHLSTTSKCEAPEAQAAAASSKAT-QLGQVEAAXXXXXXXXXXXXXXXXXXXRAKALGEKTAAFEARREAQAKAEARAREAA 416
            GFGSPGR RT  TAK+PSRK +P+AK S STPGPSGLK   H+A + V    P +A     E  +PT GS+ +DAFAKFRAMDSNSK       SFKLRS +     S  K                   FSGS+A  +                  A     +    XXXXXXXXXXXXXXXXXX +A++L EK A  EARR+AQAKAE +AREAA
Sbjct:   78 GFGSPGRHRTPATAKSPSRKASPFAKDSISTPGPSGLKAAAHKAFSRVGVKPPPSA---NPEVPSPT-GSTTQDAFAKFRAMDSNSKKASGSVQSFKLRSPSPKGPLSSAKQXXXXXXXXXXXXXXQKLDFSGSKASNNXXXXXXXXXXXXXKRGGDAAGSXXEGTPXXXXXXXXXXXXXXXXXXXAKARSLAEKAATDEARRDAQAKAELKAREAA 290
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BLAST of mRNA_A-nodosum_M_contig8641.2.1 vs. uniprot
Match: A0A6H5L3Q6_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q6_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 4.710e-15
Identity = 60/100 (60.00%), Postives = 69/100 (69.00%), Query Frame = 0 
Query:  205 GFGSPGRLRT-FTAKTPSRKVNPYAKGSKSTPGPSGLKVGVHEALNNVKPSTPTTAASGGNETETPTSGSSARDAFAKFRAMDSNSKNGGPS---FKLRS 300
            GFGSPGR RT  TAK+PSRK +P+AK S STPGPSGLK   H+A + V    P +A S   E  +PT GS+ +DAFAKFRAMDSNSK    S   FKLRS
Sbjct:  472 GFGSPGRHRTPATAKSPSRKASPFAKDSISTPGPSGLKAAAHKAFSRVGVKQPPSANS---EIPSPT-GSTTQDAFAKFRAMDSNSKKASGSVHSFKLRS 567
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8641.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQB1_ECTSI1.350e-1548.39INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]
A0A6H5L3Q6_9PHAE4.710e-1560.00SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 483..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..579
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..531

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8641contigA-nodosum_M_contig8641:6715..11295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8641.2.1mRNA_A-nodosum_M_contig8641.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8641 6709..14268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8641.2.1 ID=prot_A-nodosum_M_contig8641.2.1|Name=mRNA_A-nodosum_M_contig8641.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=580bp
MQAQAYVKAHETNMKAQALVQQQPLASPWTLSKIGASSAAGDKEEHQVVL
AKKRQDIAKRGDSESKSGEYGEEVAQEIAEPEEPSDKSSIPDWARRKTPT
KILDRQYGRPNPLNPDKIYLEQSSPAAKTQPLNEKPPAISTLPFARPLVP
SSPALVPSAAPPSAVAPPPPTADAPHPCTPPGSAAASRFSAPASTNDKPA
SANEGFGSPGRLRTFTAKTPSRKVNPYAKGSKSTPGPSGLKVGVHEALNN
VKPSTPTTAASGGNETETPTSGSSARDAFAKFRAMDSNSKNGGPSFKLRS
TALFKTASPTKHGNSHLMPPPSHKLDLTSSFSGSRAHLSTTSKCEAPEAQ
AAAASSKATQLGQVEAAAPASRTRTALAAEKERETARAKALGEKTAAFEA
RREAQAKAEARAREAAFKAAAERAAKEKAAKAEMRKRGKREADSRHQEKR
ARAIAAEALRQVDLKTAAAEAAEATAAAAATAAAAVRKEAESAEAVLNRA
QQQVTRLTKPPTPPRPSGKAPPTPPRTAPQPGALRTPAFSFDAAVPPPGA
SSSSGPGPDPCADAESGARQDSDPRANAG*
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