prot_A-nodosum_M_contig863.15.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig863.15.1
Unique Nameprot_A-nodosum_M_contig863.15.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length312
Homology
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BLAST of mRNA_A-nodosum_M_contig863.15.1 vs. uniprot
Match: D7FLR2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLR2_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 8.440e-51
Identity = 108/208 (51.92%), Postives = 141/208 (67.79%), Query Frame = 0 
Query:   20 AESGKRK-LELAACEGLPCEIMES-GVPRHVFERMDLLWRASHSLRVSSPSISRMYSDQLRKLFAE---QGPGAGSL-SDWVSDTICTSCGGVLTPGITCRVRLKHRSLKSPSVKKAAKSKRLKKL-----QNELVMTCALCGEVNVRPGAERRTHHR-RRRKGDSTDSARPEAAERAADAVFSTPRVK-----GALRGSFIPLGGSS 210
            A++ +RK LELA CEGLP E+ ES GV  HVF+RMD LWRAS+ LR+ SP++SR+YSDQLRKL AE   + PG+G L  +WVSD++C SCGG+LTPGITCR+R++HRSL SPSVKKA    R++K      +NE+V TC  CG +N R G ER+   + RRR+G S    R +A   + + + +    K       LRG +IPLGG S
Sbjct:   11 AKTEERKVLELAECEGLPREMTESDGVTEHVFQRMDFLWRASNCLRLVSPAVSRIYSDQLRKLCAEYEARRPGSGPLLPEWVSDSLCNSCGGILTPGITCRIRVRHRSLASPSVKKAKAKTRVEKTNTNKCRNEVVTTCLTCGGINTRGGTERQARDKKRRRRGGSR--GRKQAVRDSGEGIEALKGKKRNRDAATLRGDYIPLGGGS 216
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BLAST of mRNA_A-nodosum_M_contig863.15.1 vs. uniprot
Match: A0A835Z2F4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2F4_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.200e-15
Identity = 54/145 (37.24%), Postives = 77/145 (53.10%), Query Frame = 0 
Query:   33 EGLPCEIMESGVPRHVFERMDLLWRASHSLRVSSPSISRMYSDQLRKLF-AEQGPGAGSLSDWVSDTICTSCGGVLTPGITCRVRLKHRSLKSPSVKK--------AAKSKRLKKLQNELVMTCALCGEVNVRPGAERRTHHRRR 168
            EGLP  ++E G+    F R+D LWRA+ +     P+++R Y+ Q + L   E     GS  D+ +  +C  C   L PG+ C VR++HRS +SP  +K        AA  + L + QN+LVMTCALCG     PG  +     RR
Sbjct:    6 EGLPKALIELGLDAAAFHRLDFLWRAAGAYAQPCPTLARRYAAQFKSLARVELHSIVGS--DFFATDLCGHCHSRLEPGVNCTVRVRHRSKRSPLSRKLTAKSRGGAAPEQGLGRPQNQLVMTCALCGASTRLPGCTKSARQARR 148
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig863.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLR2_ECTSI8.440e-5151.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z2F4_9STRA1.200e-1537.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.20.50.20coord: 98..158
e-value: 1.3E-8
score: 36.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..311
NoneNo IPR availablePANTHERPTHR14742RIBONUCLEASE P SUBUNIT P21coord: 45..192
IPR007175Ribonuclease P subunit, Rpr2/Snm1/Rpp21PFAMPF04032Rpr2coord: 51..151
e-value: 9.7E-17
score: 61.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig863contigA-nodosum_M_contig863:59635..92591 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig863.15.1mRNA_A-nodosum_M_contig863.15.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig863 59622..92913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig863.15.1 ID=prot_A-nodosum_M_contig863.15.1|Name=mRNA_A-nodosum_M_contig863.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=312bp
MEKETLQEGETRVTEVTNVAESGKRKLELAACEGLPCEIMESGVPRHVFE
RMDLLWRASHSLRVSSPSISRMYSDQLRKLFAEQGPGAGSLSDWVSDTIC
TSCGGVLTPGITCRVRLKHRSLKSPSVKKAAKSKRLKKLQNELVMTCALC
GEVNVRPGAERRTHHRRRRKGDSTDSARPEAAERAADAVFSTPRVKGALR
GSFIPLGGSSSASSGPPRRSRPSSAVKPEASWSKTVDPSVRKSSGHGRSS
SSGDVVDVEKRRGGDDGRTGGKLSSGGEPLSLLERIRMDAKKKRQQEKAA
DLARNKSTLDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007175Rpr2/Snm1/Rpp21