prot_A-nodosum_M_contig8612.2.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8612.2.2
Unique Nameprot_A-nodosum_M_contig8612.2.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length193
Homology
BLAST of mRNA_A-nodosum_M_contig8612.2.2 vs. uniprot
Match: A0A6H5JGC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC1_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 2.000e-60
Identity = 118/258 (45.74%), Postives = 143/258 (55.43%), Query Frame = 0
Query:    1 REGRTPDPTRSVFRDLHQWLC-DEGVRTLSMLLCGPNIAPGLHGTRHTFSHQTHTLRLASLGNNGGG--------------------------------------DGLYHDVAHLFSAPDAIFLFNAGLWGYDDWLPTMELILR------PVDNLSDRR-----VPSS-AQASNVDMIVVTSYCAEEAEDDMDTLEQLLVC------------GRAP--GFKWLWGPEVNPFRSLVPRKTRCGEEGRLLFENHSWQAI 193
            REG TP  TR++F DL Q L  DE V  L  +LCGPNI P LHGTRHTF H  H    A +  N  G                                       GLYHDV+ LF+ PDAIFLFNAGLWGYDDW PT+E IL       P D++ +R+     +P++  +  NV  +VVTSYC+EEA DDM+TLE++L+               +P  G +WLW PEVNP RS VPR+T CG EGR LFENHSWQA+
Sbjct:   63 REGTTPQQTRAMFVDLLQRLGHDEHVLDLDFVLCGPNIPPHLHGTRHTFVHH-HAPAAAKMDQNICGLDGVWQESPAATPGMRTTRCCDSPPSTAGALTVRLWYNSGLYHDVSGLFATPDAIFLFNAGLWGYDDWEPTLEYILGCDRAACPSDHVGNRQASPPPIPATNPRPRNVAPVVVTSYCSEEASDDMETLERVLLAEDGSFVEVSPGVASSPVGGLEWLWKPEVNPHRSRVPRRTECGVEGRALFENHSWQAL 319          
BLAST of mRNA_A-nodosum_M_contig8612.2.2 vs. uniprot
Match: D7FNZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNZ1_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 2.640e-44
Identity = 80/152 (52.63%), Postives = 101/152 (66.45%), Query Frame = 0
Query:   68 GLYHDVAHLFSAPDAIFLFNAGLWGYDDWLPTMELILR------PVDNLSDRR-----VPSSAQAS-NVDMIVVTSYCAEEAEDDMDTLEQLLV------------CGRAP--GFKWLWGPEVNPFRSLVPRKTRCGEEGRLLFENHSWQAI 193
            GLYHDV+ LF+ PDA+FLFNAGLWGYDDW PT+E IL       P D++ +R+     +P++     N   +VVTSYC+EEA DDM+TLE++L+               +P  G +WLW PEVNP RS VPR+T CG EGR LFENHSWQA+
Sbjct:   95 GLYHDVSGLFATPDALFLFNAGLWGYDDWEPTLEHILGCDRAACPSDHVGNRQASPPPIPATKSGPRNAVPVVVTSYCSEEASDDMETLERVLLGEDGNFVELSPGVASSPVGGLEWLWKPEVNPHRSRVPRRTECGVEGRALFENHSWQAL 246          
BLAST of mRNA_A-nodosum_M_contig8612.2.2 vs. uniprot
Match: A0A225WI69_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WI69_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.880e-30
Identity = 72/195 (36.92%), Postives = 101/195 (51.79%), Query Frame = 0
Query:    1 REGRTPDPTRSVFRDLHQWLCDEGVRTLSMLLCGPNIAPGLHGTR--HTFSHQTHTLRLASLGNNGGGDGLYHDVAHLFSAPDAIFLFNAGLWGYDDWLPTMELILRPVDNLSDRRVPSSAQASNVDMIVVTSYCAEEAEDDMDTLEQLLVCGRAPGFKWLWGPEVNPFRSLVPRKTRCGEEGRLLFENHSWQAI 193
            REG T   T  VFR L +++ +  V +L ++L GPN+A  LH T    ++S     L    +    GG   Y +   L+  PD +  FNAG+WGYD+WLP + L+L  V      +VP          ++VTSY  +EA DD D L++L     AP  KWLW PE N + +  PR T   E+G +L EN  W  +
Sbjct:   44 REGNTGTETFEVFRRLTKYVAETNVTSLKLVLVGPNLARKLHLTSFLQSYSEVDGVLCQVDISYFVGGFEAYFEDKTLYCKPDLVVCFNAGIWGYDEWLPAIRLVLDEV------QVP----------LLVTSYNEQEAGDDEDVLDEL-----APS-KWLWRPEKNSYGATTPRATN-NEDGSILKENDYWMCL 215          
BLAST of mRNA_A-nodosum_M_contig8612.2.2 vs. uniprot
Match: A0A329SJ16_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SJ16_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.770e-27
Identity = 71/196 (36.22%), Postives = 95/196 (48.47%), Query Frame = 0
Query:    1 REGRTPDPTRSVFRDLHQWLCDEG-VRTLSMLLCGPNIAPGLHGTR--HTFSHQTHTLRLASLGNNGGGDGLYHDVAHLFSAPDAIFLFNAGLWGYDDWLPTMELILRPVDNLSDRRVPSSAQASNVDMIVVTSYCAEEAEDDMDTLEQLLVCGRAPGFKWLWGPEVNPFRSLVPRKTRCGEEGRLLFENHSWQAI 193
            REG +   T  VFR     + +E  + +L ++L GPN+A  LH TR    FS          +    GG   Y +   L+  PD +  FNAG+WGYD+WLP + L+L  V      RVP          ++VTSY   EA DD D L++L        F WLW PE NP  +  PR T   E+G +L EN  W  +
Sbjct:   45 REGNSGAETYEVFRSFSWHVANETHLSSLKLVLVGPNLARNLHLTRLSQEFSETDAKTCQVDISYFVGGFESYFEDKTLYCEPDLVVCFNAGIWGYDEWLPAIRLLLNEV------RVP----------LLVTSYNKHEAGDDEDVLDEL------QPFTWLWRPEKNPHGARTPRATN-NEDGSILKENDYWLCL 217          
BLAST of mRNA_A-nodosum_M_contig8612.2.2 vs. uniprot
Match: A0A6A3SXM9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SXM9_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.840e-27
Identity = 71/194 (36.60%), Postives = 97/194 (50.00%), Query Frame = 0
Query:    1 REGRTPDPTRSVFRDLHQWLCDEG-VRTLSMLLCGPNIAPGLHGTRHTFSHQTHTLRLASLGNNGGGDGLYHDVAHLFSAPDAIFLFNAGLWGYDDWLPTMELILRPVDNLSDRRVPSSAQASNVDMIVVTSYCAEEAEDDMDTLEQLLVCGRAPGFKWLWGPEVNPFRSLVPRKTRCGEEGRLLFENHSWQAI 193
            REG T   T  VFR   Q++  E  +  + M+L GPN++  LH    + S  T T  +      GG +G + D    +  PD +  FNAG+WGYD+WLP + L+L      S+ RVP          ++VTSY   EA DD D L+ L+        KWLW PE NP  +  PR T   E+G +L EN  W  +
Sbjct:   49 REGSTGPQTFEVFRGFSQYVASETPLSAVKMVLVGPNLSRQLHLIHFSSSDAT-TCHVDISYFVGGFEGFFEDKTQ-YCEPDLVVCFNAGIWGYDEWLPAIRLVL------SEVRVP----------LLVTSYNEHEAGDDEDVLDDLMPS------KWLWRPEKNPRGATTPRATN-NEDGSVLKENDYWMCL 217          
BLAST of mRNA_A-nodosum_M_contig8612.2.2 vs. uniprot
Match: A0A662YGW6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGW6_9STRA)

HSP 1 Score: 112 bits (280), Expect = 3.090e-27
Identity = 75/198 (37.88%), Postives = 102/198 (51.52%), Query Frame = 0
Query:    1 REGRTPDPTRSVFRDLHQWLC-DEGVRTLSMLLCGPNIAPGLHGTRHT----FSHQTHTLRLASLGNNGGGDGLYHDVAHLFSAPDAIFLFNAGLWGYDDWLPTMELILRPVDNLSDRRVPSSAQASNVDMIVVTSYCAEEAEDDMDTLEQLLVCGRAPGFKWLWGPEVNPFRSLVPRKTRCGEEGRLLFENHSWQAI 193
            REG TP  T  VFR   ++L  D    TL ++L GPN+A  LH  +H+     + +T  + L+     GG +  + D A L+ APD +  FNAG+WGYD+WLPT+ L+L+ V            QA     ++VTSY   EA DD D L+ L     AP  +WLW  E NP  +  PR T     G +L EN  W  +
Sbjct:   51 REGNTPSETVEVFRSFSRYLAVDPRFSTLELVLVGPNLARTLHLQKHSQLCDAAGKTCQMELSYF--VGGFEEYFADKA-LYLAPDLVACFNAGIWGYDEWLPTIRLVLKEV------------QAP----LLVTSYNENEAGDDEDVLDDL-----APA-RWLWRAEKNPSGARTPRATN-NPAGEVLKENDYWMCV 222          
BLAST of mRNA_A-nodosum_M_contig8612.2.2 vs. uniprot
Match: A0A3M6VW30_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VW30_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.740e-27
Identity = 72/200 (36.00%), Postives = 100/200 (50.00%), Query Frame = 0
Query:    1 REGRTPDPTRSVFRDL-HQWLCDEGVRTLSMLLCGPNIAPGLHGTRHTFSHQTH------TLRLASLGNNGGGDGLYHDVAHLFSAPDAIFLFNAGLWGYDDWLPTMELILRPVDNLSDRRVPSSAQASNVDMIVVTSYCAEEAEDDMDTLEQLLVCGRAPGFKWLWGPEVNPFRSLVPRKTRCGEEGRLLFENHSWQAI 193
            REG T   T  VFR   H       V +L ++L GPN++  LH  +   S++        T+    +    GG   Y +   L+  PD I  FNAG+WGYD+WLP + L+LR V      +VP          +++TSY   EAEDD D L++L        F+WLW PE N + +  PR T   EEGR+L EN+ W  +
Sbjct:   34 REGNTGAETFEVFRTFTHHVATRMRVTSLQLVLVGPNLSSKLHLQQVLQSYKKSNDKADTTMCHVDMRYFVGGFEAYFNDKMLYCPPDLIVCFNAGIWGYDEWLPAIRLVLREV------QVP----------LLITSYNEHEAEDDEDVLDKLTP------FQWLWRPEKNLYGASTPRATD-NEEGRILKENNYWMCL 210          
BLAST of mRNA_A-nodosum_M_contig8612.2.2 vs. uniprot
Match: H3GBG1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBG1_PHYRM)

HSP 1 Score: 111 bits (277), Expect = 5.100e-27
Identity = 70/194 (36.08%), Postives = 96/194 (49.48%), Query Frame = 0
Query:    1 REGRTPDPTRSVFRDLHQWLCDEG-VRTLSMLLCGPNIAPGLHGTRHTFSHQTHTLRLASLGNNGGGDGLYHDVAHLFSAPDAIFLFNAGLWGYDDWLPTMELILRPVDNLSDRRVPSSAQASNVDMIVVTSYCAEEAEDDMDTLEQLLVCGRAPGFKWLWGPEVNPFRSLVPRKTRCGEEGRLLFENHSWQAI 193
            REG +   T  VFR   Q++  E  + TL ++L GPN++  LH    +FS          +    GG   Y +   L+ APD +  FNAG+WGYD+WLP + L+L  V      +VP          ++VTSY   EA DD D L+ L+        KWLW PE NP  +  PR T   E+G +L EN  W  +
Sbjct:   45 REGNSGAETFDVFRSFSQYVATETHLSTLKLVLVGPNLSRKLH--LQSFSFDEAETGHVDVSYFVGGFEAYFEDKTLYCAPDLVVCFNAGIWGYDEWLPAIRLVLGEV------QVP----------LLVTSYNEHEAGDDEDVLDGLIPS------KWLWRPEKNPRGARTPRATN-NEDGSILKENDYWMCL 213          
BLAST of mRNA_A-nodosum_M_contig8612.2.2 vs. uniprot
Match: D0MQE6_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MQE6_PHYIT)

HSP 1 Score: 110 bits (276), Expect = 5.910e-27
Identity = 68/194 (35.05%), Postives = 99/194 (51.03%), Query Frame = 0
Query:    1 REGRTPDPTRSVFRDLHQWLCDEG-VRTLSMLLCGPNIAPGLHGTRHTFSHQTHTLRLASLGNNGGGDGLYHDVAHLFSAPDAIFLFNAGLWGYDDWLPTMELILRPVDNLSDRRVPSSAQASNVDMIVVTSYCAEEAEDDMDTLEQLLVCGRAPGFKWLWGPEVNPFRSLVPRKTRCGEEGRLLFENHSWQAI 193
            REG T   T  VFR   Q+L  E  + +L ++L GPN++  LH TR +  +             GG +  + D A L+  PD +  FNAG+WGYD+W+P ++L+L  V      RVP          ++VTSY  +EA DD D L++L+        +WLW  E NP  +  PR T   ++G +L EN  W  +
Sbjct:   47 REGNTGAETFDVFRSFTQYLAKETHLTSLKLVLVGPNLSRKLHLTRFSQDYFV-----------GGFEAYFEDKA-LYCQPDLVVCFNAGIWGYDEWIPAIKLVLNEV------RVP----------LLVTSYNEQEAGDDEDVLDELMP------LRWLWRSEKNPRGACTPRTTN-NKDGSILKENDYWMCL 205          
BLAST of mRNA_A-nodosum_M_contig8612.2.2 vs. uniprot
Match: G4ZM55_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZM55_PHYSP)

HSP 1 Score: 109 bits (272), Expect = 2.390e-26
Identity = 70/194 (36.08%), Postives = 101/194 (52.06%), Query Frame = 0
Query:    1 REGRTPDPTRSVFRDLHQWLCDEGVRT-LSMLLCGPNIAPGLHGTRHTFSHQTHTLRLASLGNNGGGDGLYHDVAHLFSAPDAIFLFNAGLWGYDDWLPTMELILRPVDNLSDRRVPSSAQASNVDMIVVTSYCAEEAEDDMDTLEQLLVCGRAPGFKWLWGPEVNPFRSLVPRKTRCGEEGRLLFENHSWQAI 193
            REG T   T  VFR   Q++  E   T + ++L GPN++  +H T+++   QT+ +        GG +  + D A L+  PD +  FNAG+WGYD+WLP + L+L+ V      RVP          ++VTSY   EA DD D L++L+        KWLW  E NP  +  PR T   E+G +L EN  W  +
Sbjct:   48 REGNTGPQTFEVFRGFAQFVASETHLTAVKLVLVGPNLSRRMHLTQYS---QTYFV--------GGFEAYFEDKA-LYCEPDLVVCFNAGIWGYDEWLPAIRLVLQEV------RVP----------LLVTSYNEHEAGDDEDVLDELMPS------KWLWRAEKNPRGANTPRATN-NEDGSILKENDYWMCL 206          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8612.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGC1_9PHAE2.000e-6045.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNZ1_ECTSI2.640e-4452.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A225WI69_9STRA3.880e-3036.92Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A329SJ16_9STRA2.770e-2736.22Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A3SXM9_9STRA2.840e-2736.60Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A662YGW6_9STRA3.090e-2737.88Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3M6VW30_9STRA4.740e-2736.00Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
H3GBG1_PHYRM5.100e-2736.08Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
D0MQE6_PHYIT5.910e-2735.05Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
G4ZM55_PHYSP2.390e-2636.08Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR28069GH20023Pcoord: 68..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8612contigA-nodosum_M_contig8612:9085..9894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8612.2.2mRNA_A-nodosum_M_contig8612.2.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8612 9085..9894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8612.2.2 ID=prot_A-nodosum_M_contig8612.2.2|Name=mRNA_A-nodosum_M_contig8612.2.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=193bp
REGRTPDPTRSVFRDLHQWLCDEGVRTLSMLLCGPNIAPGLHGTRHTFSH
QTHTLRLASLGNNGGGDGLYHDVAHLFSAPDAIFLFNAGLWGYDDWLPTM
ELILRPVDNLSDRRVPSSAQASNVDMIVVTSYCAEEAEDDMDTLEQLLVC
GRAPGFKWLWGPEVNPFRSLVPRKTRCGEEGRLLFENHSWQAI
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