prot_A-nodosum_M_contig861.42.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig861.42.1
Unique Nameprot_A-nodosum_M_contig861.42.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1254
Homology
BLAST of mRNA_A-nodosum_M_contig861.42.1 vs. uniprot
Match: A0A6H5K714_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K714_9PHAE)

HSP 1 Score: 545 bits (1404), Expect = 9.270e-169
Identity = 451/864 (52.20%), Postives = 517/864 (59.84%), Query Frame = 0
Query:   59 DFFKNRFKRHNPSKNI---ASGSESAARG-----GGFTPIAEALTPAEASLLKALNSDVAGGNG-----GVAXLSGLDRLMRVMINAPDREARALCLELLIRSKDDADVMKGFVERRGLTFIKGWLAEETTSVAMIKLLLSVAKVLPVTYSSLKQSDAGRALKALYKHADPGVKKQAKAVIAHWKNELVRDEGEIAKHREKLDALHDGIKAKQAAAKKAKDDAEKAEKLKRGAIRAQNRPPNGTEAPTIISAPXXXXXXXXXXSNNSIDSDPGAPVP------SKTVARAGMFDDDPLAAI----GAPGAASGLG-----------------TTTGGSVAGT--GSARLFPGRKFPTRGTRGR--------GAAAIGAGSGRGSRGSVLRGGGGVAAGRSSAXXXXXXXXXXXXXGRSGGILKVTATPSPSK---EEGIGAGEVIGVVGETDNKPAQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVQSA---PGPPPIVSLDEMARADAAEKKRKRKARPAGKKVGWADRAGKILQIVKEFHPEDAALVVSEEPQEETPGANEAAALLQHXXXXXXKHWAERVKREREMERKFHGKSGGRVR-RPHEGSGTGGEDEGAGPGARGVELAAAS--------RRRTMMPTVSWRRPGLYQKGVVHEFVMTLEVESSEAEGQAARTRAGLEVVYLSSGDIPPSPAEPDAASFLPADGTHSSPYEIPFYMEAELEQMQXXXXXXXXXXXXXXXXXXXXXXXXRLTYEQMKALEAALATVDPHAAAALRSRFSQEPRLLQALLATEGQVNTVLLRSLCQQALSTPSNVPLTLP 857
            DFF+ R+KR N  + +   A G  +A  G     GG     E LTPAE SLLK L   VAGG G     GVA  +GLDRLMRVMINAPDREARALCLELL+RSK D +VMK FVERRGL FIKGWLAEET S+ M+KLLL+VAKVLPVTYSSL QSDAG+ALKAL KHAD  ++KQAKAVI+HW+  LV D+GEIAKHR++LD LHD +KAKQ A KKAK +   AEK +R   RAQ+RPPNG     I + P XXXXXXXXX                    +K V+ A     DP AA     GAPG  S                    + TG +      G+AR F GRK   RG  GR             G G+G+G RG                XXXXXX  XXXXX     ILKVTA  + +    ++G  AG                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       A +SA    GPPPIVSLDEMARA++ EKKR RKA+PAGKKVGWADRAG+ LQ+VKEFH EDAA  VSE PQE       AA +  H      +HWAERVKREREMERKFHGKSGGR + +   G  + G++E                       +R+ M+  V WRRPG Y+KGVVHE V+ LEVESSEAE Q ARTRAGLE VYLSSGDIP +PAEPDAASFLP D      Y+IPFYME+ELEQMQ                        ++T +Q++AL+ ALA+VDPHAA ALRSRF+ EPRLL ALLA EG+VN  LLRS+ QQALSTPSNV LTLP
Sbjct:   85 DFFRARYKRQNVGRGVGALAPGWAAALEGSQEGSGGGARAREVLTPAENSLLKTLGDAVAGGEGAGARGGVAGAAGLDRLMRVMINAPDREARALCLELLLRSKGDEEVMKAFVERRGLMFIKGWLAEETKSINMMKLLLTVAKVLPVTYSSLMQSDAGKALKALNKHADSDIRKQAKAVISHWRTALVSDKGEIAKHRKQLDDLHDKLKAKQDAEKKAKAELADAEKRRRDLARAQSRPPNGVGGSPITAPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAKGVSAASKPGRDPPAAAADSSGAPGTGSXXXXXXXXXXXXXXXXXXXXSETGAAAXXXXGGAARYFVGRKLAGRGPGGRVRRPTVAFSGTPAGQGTGKGDRGXXXX----------XXXXXXXXAGXXXXXXXXXXILKVTAVSTAATAGGQDGTAAGGXX---------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAASAPAASRSAGIGSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQESDSVV--AATMASHHAGH--RHWAERVKREREMERKFHGKSGGRSKGKSDHGRASAGDEEXXXXXXXXXXXXXXXXXXXXXXXKRKPMVTAVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQM--YKIPFYMESELEQMQAEALKEQQQQQAPANQPGPV----KVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLP 889          
BLAST of mRNA_A-nodosum_M_contig861.42.1 vs. uniprot
Match: D8LNV8_ECTSI (TFIIS N-terminal domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV8_ECTSI)

HSP 1 Score: 460 bits (1184), Expect = 7.900e-144
Identity = 360/830 (43.37%), Postives = 412/830 (49.64%), Query Frame = 0
Query:   59 DFFKNRFKRHNPSKN---IASGSESAARG-----GGFTPIAEALTPAEASLLKALNSDVAGGNG-----GVAXLSGLDRLMRVMINAPDREARALCLELLIRSKDDADVMKGFVERRGLTFIKGWLAEETTSVAMIKLLLSVAKVLPVTYSSLKQSDAGRALKALYKHADPGVKKQAKAVIAHWKNELVRDEGEIAKHREKLDALHDGIKAKQAAAKKAKDDAEKAEKLKRGAIRAQNRPPNGTEAPTIISAPXXXXXXXXXXSNNSIDSDPGAPVPSKTVARAGMFDDDPLAAIGAPGAASGLGTTTGGSVAGTGSARLFPGRKFPTRGTRGRGAAAIGAGSGRGSRGSVLRGGGGVAAGRSSAXXXXXXXXXXXXXGRSGGILKVTATPSPSKEEGIGAGEVIGVVGETDNKPAQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVQSAPGPPPIVSLDEMARADAAEKKRKRKARPAGKKVGWADRAGKILQ---------------------IVKEFHPEDAALVVSEEPQEETPGANEAAALLQHXXXXXXKHWAERVKREREMERKFHGKSGGRVRRPHEGSGTGGEDEGAGPGARGVELAAA-----------SRRRTMMPTVSWRRPGLYQKGVVHEFVMTLEVESSEAEGQAARTRAGLEVVYLSSGDIPPSPAEPDAASFLPADGTHSSPYEIPFYMEAELEQMQXXXXXXXXXXXXXXXXXXXXXXXXRLTYEQMKALEAALATVDPHAAAALRSRFSQEPRLLQALLATEGQVNTVLLRSLCQ 843
            DFF+ R+KR N  K    +A G   A  G     GG     E LTPAE SLLK L   VAGG G     GVA  +GLDRLMRVMINAPDREARALCLELL+RSK D +VMK FVERRGL FIKGWLAEET S+ M+KLLL+VAKVLPVTYSSL QSDAG+ALKAL KHAD G++KQAKAVI+HW+  LV D+GEIAKHR++LD LHD +KAKQ A KKAK +A  A+K +R   R             + + P                          T A AG  D                GT  GG+ A  G                                                    XXXXXXXXXX                   GIG+                                                                                      GPPPIVSLDEMARA++ EKKR RKA+PAGKKVGWADRAG+ LQ                     +VKEFH EDAA  VSE PQE    ++  AA          +HWAERVKREREMERKFHGKSGGR +                                       +R+ M+ TV WRRPG Y+KGVVHE V+ LEVESSEAE Q ARTRAGLE VYLSSGDIP +PAEPDAASFLP D      Y+IPFYME+ELEQMQ                        ++T +Q++AL+ ALA+VDPHAA ALRSRF+ EPRLL ALLA EG+VN  LLRS+ Q
Sbjct:   34 DFFRARYKRQNVGKGGGALAPGWAVALEGPQGGSGGGAGAREVLTPAENSLLKTLGDAVAGGGGAXXRGGVAGAAGLDRLMRVMINAPDREARALCLELLLRSKGDEEVMKAFVERRGLMFIKGWLAEETKSINMMKLLLTVAKVLPVTYSSLMQSDAGKALKALNKHADSGIRKQAKAVISHWRTALVSDKGEIAKHRKQLDDLHDKLKAKQDAEKKAKAEAADADKRRRDLAR-------------VTAVP--------------------------TAATAGGQD----------------GTADGGAAATDGEXXXXX----------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGS--------------------------------------------------------------------------------------GPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQESVEGRRLMLMNHPGTRRALQVVKEFHSEDAATAVSETPQE----SDSVAATTMASHHAGHRHWAERVKREREMERKFHGKSGGRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKRKPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQM--YKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPV----KVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQ 666          
BLAST of mRNA_A-nodosum_M_contig861.42.1 vs. uniprot
Match: A0A433PUA3_9FUNG (Serine/threonine-protein phosphatase 1 regulatory subunit 10 n=4 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PUA3_9FUNG)

HSP 1 Score: 58.5 bits (140), Expect = 8.800e-5
Identity = 38/132 (28.79%), Postives = 71/132 (53.79%), Query Frame = 0
Query:  107 SDVAGGNGGVAXLSGLDRLMRVMINAPDREARALCLELLIRSKDDADVMKGFVERRGLTFIKGWLAEETTS--VAMIKLLLSVAKVLPVTYSSLKQSDAGRALKALYKHADPG-VKKQAKAVIAHWKNELVR 235
            S + G  GG+   + L  L+++M N      R++ L L++ + +D +++K FV  +GL  ++ WL E   S   A++  LL   K LP+   +LK +  GR +K++ K+++   VK+    ++  WK  + R
Sbjct:  131 STLVGPTGGIPSPTSLKHLVQIMRNETRLVNRSVMLTLIMNT-NDTNMLKSFVNSKGLAILRAWLVETAKSDNAALLVKLLETLKHLPIDLEALKTTGLGRVVKSMTKNSEKTEVKQLINELMQQWKQLIER 261          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig861.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K714_9PHAE9.270e-16952.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNV8_ECTSI7.900e-14443.37TFIIS N-terminal domain-containing protein (Fragme... [more]
A0A433PUA3_9FUNG8.800e-528.79Serine/threonine-protein phosphatase 1 regulatory ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 254..281
NoneNo IPR availableCOILSCoilCoilcoord: 226..246
NoneNo IPR availableCOILSCoilCoilcoord: 756..779
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 853..914
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1053..1069
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 621..649
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1028..1042
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..563
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1022..1113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 853..882
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 757..791
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1183..1253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 589..670
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 897..913
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 189..231
e-value: 4.2E-6
score: 26.7
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 165..236
score: 13.539439
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 135..239
e-value: 5.3E-9
score: 37.9
IPR035441TFIIS/LEDGF domain superfamilySUPERFAMILY47676Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 155..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig861contigA-nodosum_M_contig861:248512..267225 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig861.42.1mRNA_A-nodosum_M_contig861.42.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig861 247188..267268 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig861.42.1 ID=prot_A-nodosum_M_contig861.42.1|Name=mRNA_A-nodosum_M_contig861.42.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1254bp
MKQEKPNQPMAGKRSRSDDHASSTTANGNSSSAASARQDGEPKAGGNARD
VERNENAIDFFKNRFKRHNPSKNIASGSESAARGGGFTPIAEALTPAEAS
LLKALNSDVAGGNGGVAGLSGLDRLMRVMINAPDREARALCLELLIRSKD
DADVMKGFVERRGLTFIKGWLAEETTSVAMIKLLLSVAKVLPVTYSSLKQ
SDAGRALKALYKHADPGVKKQAKAVIAHWKNELVRDEGEIAKHREKLDAL
HDGIKAKQAAAKKAKDDAEKAEKLKRGAIRAQNRPPNGTEAPTIISAPPP
PLLYTRSSSNNSIDSDPGAPVPSKTVARAGMFDDDPLAAIGAPGAASGLG
TTTGGSVAGTGSARLFPGRKFPTRGTRGRGAAAIGAGSGRGSRGSVLRGG
GGVAAGRSSATAATAAAAAPAPAGRSGGILKVTATPSPSKEEGIGAGEVI
GVVGETDNKPAQAPASVAVTTTATAAPATKVADSGTGAGEAVSLVATAPA
PAKAPAPAPASAEGSSDIAIPAGGGVAVQSAPGPPPIVSLDEMARADAAE
KKRKRKARPAGKKVGWADRAGKILQIVKEFHPEDAALVVSEEPQEETPGA
NEAAALLQHPQHHHHKHWAERVKREREMERKFHGKSGGRVRRPHEGSGTG
GEDEGAGPGARGVELAAASRRRTMMPTVSWRRPGLYQKGVVHEFVMTLEV
ESSEAEGQAARTRAGLEVVYLSSGDIPPSPAEPDAASFLPADGTHSSPYE
IPFYMEAELEQMQADQEQEKEQQHQERQQNSPSPPPPRLTYEQMKALEAA
LATVDPHAAAALRSRFSQEPRLLQALLATEGQVNTVLLRSLCQQALSTPS
NVPLTLPPLPTTTAGASPTGQQQQQSTLRASPSPAAVPAAVAGTPYPHQP
QLPPPPPPRLAQPVAPGAAVAGSFDAPGAMVSQTPQGVVAGAVVPPAVPQ
QANTFGAASPAAGAPSVILGVPQHLPPPPPPPPPAAFAAPAAGPHQAVPI
QPNAPPHPPAYFGVQTPGAVAAPAAPQGMGLPPNPPPPVLYHQQQQPQQQ
QMVPPGMPGPAPGPGPGGQAGPPLGIEAGGGGPGFGHEGARDGWEGGGGR
GIGGGGKERDGDRGRRMVKPIFCRYHNAKVQMCTNDPCRFIHDLTHYPDE
HRPRVRSYGGFANRDRDSGDRERERDWDRRDRGGRDWERRDRRDRGEREE
RTSERDGRDGDGGEEAGDGRDTGRGGRGRGGGGLDGRDRSDGRGSDDKRA
RYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017923TFIIS_N
IPR035441TFIIS/LEDGF_dom_sf