prot_A-nodosum_M_contig861.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig861.1.1
Unique Nameprot_A-nodosum_M_contig861.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length80
Homology
BLAST of mRNA_A-nodosum_M_contig861.1.1 vs. uniprot
Match: D8LNS9_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS9_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 7.820e-42
Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    1 RQRLNATHASTSIDFPDGTRNLLKLKAGVSMTAGLYEEATFYFLVTIPPSYPFHAPSAVCTSRVCHPNIDLHSGFVSLPI 80
            + RLNATHASTSIDFPDGTRNLLKLK GVSMTAGL+E ATFYF++TIPPSYPFHAP+ VCTSR  HPNIDLH+G VSLPI
Sbjct:   21 QHRLNATHASTSIDFPDGTRNLLKLKVGVSMTAGLFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPI 100          
BLAST of mRNA_A-nodosum_M_contig861.1.1 vs. uniprot
Match: A0A7S2S2N1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2N1_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.000e-21
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    2 QRLNATHASTSIDFPDGTRNLLKLKAGVSMTAGLYEEATFYFLVTIPPSYPFHAPSAVCTSRVCHPNIDLHSGFVSLPI 80
            QRL+   ASTS++ P+G ++L  +   VSM  GLY   +F F + IPPSYPFHAP+ VC +RV HPNIDL +G V LP+
Sbjct:   56 QRLSCASASTSVELPNGCKDLSLVVVTVSMLGGLYRGGSFTFHILIPPSYPFHAPNVVCMTRVLHPNIDLETGQVLLPL 134          
BLAST of mRNA_A-nodosum_M_contig861.1.1 vs. uniprot
Match: A0A7S2S1V2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1V2_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.630e-19
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    2 QRLNATHASTSIDFPDGTRNLLKLKAGVSMTAGLYEEATFYFLVTIPPSYPFHAPSAVCTSRVCHPNIDLHSGFVSLPI 80
            QRL+   ASTS++ P+G ++L  +   VSM  GLY   +F F + IPPSYPFHAP+ VC +RV HPNIDL +G V LP+
Sbjct:   56 QRLSCASASTSVELPNGCKDLSLVVVTVSMLGGLYRGGSFTFHILIPPSYPFHAPNVVCMTRVLHPNIDLETGQVLLPL 134          
BLAST of mRNA_A-nodosum_M_contig861.1.1 vs. uniprot
Match: K3WPB1_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPB1_GLOUD)

HSP 1 Score: 77.8 bits (190), Expect = 9.300e-16
Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 0
Query:    1 RQRLNATHASTSIDFPDGTRNLLKLKAGVSMT--AGLYEEATFYFLVTIPPSYPFHAPSAVCTSRVCHPNIDLHSGFVSLPI 80
            + +     A T +DFPDG  N+LKL   +S+   AG Y    F F V IP +YPFHAPS  C ++V HPNID  +G V +PI
Sbjct:   21 KAKFTCHQAKTRVDFPDGANNMLKLIFTISIADVAGPYANGDFTFFVEIPKTYPFHAPSVTCLTKVWHPNIDPTTGKVMMPI 102          
BLAST of mRNA_A-nodosum_M_contig861.1.1 vs. uniprot
Match: A0A3F2RJX4_9STRA (UBC core domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJX4_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.220e-15
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    1 RQRLNATHASTSIDFPDGTRNLLKLKAGVSMT--AGLYEEATFYFLVTIPPSYPFHAPSAVCTSRVCHPNIDLHSGFVSLPI 80
            + +   + A T +DFPDG  N+LK+   +S+   +G +    F F V IP +YPFHAP   C +RV HPN+D+ +G V +PI
Sbjct:   21 KAKFTCSQAKTRVDFPDGAENMLKINFAISIADVSGPFANGDFTFFVEIPKTYPFHAPIVRCLTRVWHPNVDMTTGKVMMPI 102          
BLAST of mRNA_A-nodosum_M_contig861.1.1 vs. uniprot
Match: A0A329RS56_9STRA (UBC core domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329RS56_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.170e-14
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    1 RQRLNATHASTSIDFPDGTRNLLKLKAGVSMT--AGLYEEATFYFLVTIPPSYPFHAPSAVCTSRVCHPNIDLHSGFVSLPI 80
            + +     A T ++FPDG  N+L+L   +S+   +G +    F F V IP +YPFHAPS  C SRV HPNID+ +G V +PI
Sbjct:   21 KAKFTCAQARTRVEFPDGANNMLQLIFTISIIDLSGPFANGDFTFFVDIPKTYPFHAPSVRCLSRVWHPNIDIATGKVMMPI 102          
BLAST of mRNA_A-nodosum_M_contig861.1.1 vs. uniprot
Match: G4Z9T7_PHYSP (UBC core domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4Z9T7_PHYSP)

HSP 1 Score: 74.7 bits (182), Expect = 1.640e-14
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    1 RQRLNATHASTSIDFPDGTRNLLKLKAGVSMT--AGLYEEATFYFLVTIPPSYPFHAPSAVCTSRVCHPNIDLHSGFVSLPI 80
            + +     A+T +DFPDG  N+L+L   +S+   +G +    F F V IP +YPFH PS  C +RV HPNID+ +G V +PI
Sbjct:   21 KAKFTCNQATTRVDFPDGADNMLRLIFTISIADVSGPFANGDFTFFVEIPKTYPFHPPSVKCLTRVWHPNIDMATGKVMMPI 102          
BLAST of mRNA_A-nodosum_M_contig861.1.1 vs. uniprot
Match: H3GWZ8_PHYRM (UBC core domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWZ8_PHYRM)

HSP 1 Score: 75.9 bits (185), Expect = 2.700e-14
Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 0
Query:    1 RQRLNATHASTSIDFPDGTRNLLKLKAGVSMT--AGLYEEATFYFLVTIPPSYPFHAPSAVCTSRVCHPNIDLHSGFVSLPI 80
            + +   + A T +DFPDG  N+L+L   +S+   +G +    F F V IP +YPFHAPS  C +RV HPN+D+ +G V +PI
Sbjct:   21 KAKFTCSQAKTRVDFPDGADNMLRLIFTISIADVSGPFANGDFTFFVEIPKTYPFHAPSVRCLTRVWHPNVDMATGKVMMPI 102          
BLAST of mRNA_A-nodosum_M_contig861.1.1 vs. uniprot
Match: A0A484E8K9_BRELC (UBC core domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8K9_BRELC)

HSP 1 Score: 73.9 bits (180), Expect = 3.220e-14
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    1 RQRLNATHASTSIDFPDGTRNLLKLKAGVSMT--AGLYEEATFYFLVTIPPSYPFHAPSAVCTSRVCHPNIDLHSGFVSLPI 80
            + +     A T ++FPDG  N+L+L   +S+   +G +    F FLV IP +YPFHAP   C +RV HPNID+ +G V +PI
Sbjct:   21 KAKFTCAQARTRVEFPDGANNMLQLIFTISIIDLSGPFANGDFTFLVDIPKTYPFHAPGVRCLTRVWHPNIDITTGKVMMPI 102          
BLAST of mRNA_A-nodosum_M_contig861.1.1 vs. uniprot
Match: W2JGX7_PHYPR (UBC core domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2JGX7_PHYPR)

HSP 1 Score: 73.9 bits (180), Expect = 9.870e-14
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    1 RQRLNATHASTSIDFPDGTRNLLKLKAGVSMT--AGLYEEATFYFLVTIPPSYPFHAPSAVCTSRVCHPNIDLHSGFVSLPI 80
            + +     A T ++FPDG  N+L+L   +S+   +G +    F F V IP +YPFHAPS  C +RV HPNID+ +G V +PI
Sbjct:  136 KAKFTCAQARTRVEFPDGANNMLQLIFTISIIDLSGPFANGDFTFFVDIPKTYPFHAPSVRCLTRVWHPNIDIATGKVMMPI 217          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig861.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LNS9_ECTSI7.820e-4283.75UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S2S2N1_9STRA2.000e-2153.16Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2S1V2_9STRA1.630e-1953.16Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K3WPB1_GLOUD9.300e-1646.34UBC core domain-containing protein n=1 Tax=Globisp... [more]
A0A3F2RJX4_9STRA3.220e-1541.46UBC core domain-containing protein n=1 Tax=Phytoph... [more]
A0A329RS56_9STRA1.170e-1443.90UBC core domain-containing protein n=3 Tax=Phytoph... [more]
G4Z9T7_PHYSP1.640e-1442.68UBC core domain-containing protein n=3 Tax=Phytoph... [more]
H3GWZ8_PHYRM2.700e-1442.68UBC core domain-containing protein n=1 Tax=Phytoph... [more]
A0A484E8K9_BRELC3.220e-1442.68UBC core domain-containing protein n=1 Tax=Bremia ... [more]
W2JGX7_PHYPR9.870e-1442.68UBC core domain-containing protein n=12 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 13..80
e-value: 2.0E-12
score: 47.0
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..80
score: 14.269131
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 2..80
e-value: 4.6E-12
score: 47.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 15..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig861contigA-nodosum_M_contig861:10399..13063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig861.1.1mRNA_A-nodosum_M_contig861.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig861 10399..13065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig861.1.1 ID=prot_A-nodosum_M_contig861.1.1|Name=mRNA_A-nodosum_M_contig861.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=80bp
RQRLNATHASTSIDFPDGTRNLLKLKAGVSMTAGLYEEATFYFLVTIPPS
YPFHAPSAVCTSRVCHPNIDLHSGFVSLPI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD