prot_A-nodosum_M_contig8601.2.7 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8601.2.7
Unique Nameprot_A-nodosum_M_contig8601.2.7
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length54
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8601.2.7 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 13..26
score: 54.1
coord: 34..47
score: 54.26
NoneNo IPR availablePANTHERPTHR46662DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEINcoord: 1..51
NoneNo IPR availablePANTHERPTHR46662:SF42RECEPTOR-LIKE PROTEIN 12coord: 1..51
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..50
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 7..47
e-value: 3.3E-9
score: 36.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..54
e-value: 1.4E-18
score: 69.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8601contigA-nodosum_M_contig8601:641..1427 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8601.2.7mRNA_A-nodosum_M_contig8601.2.7Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8601 641..1427 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8601.2.7 ID=prot_A-nodosum_M_contig8601.2.7|Name=mRNA_A-nodosum_M_contig8601.2.7|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=54bp
GAIPPDLGKLSALQSLDLSQNQLDGAIPPDLGKLSALQSLDLSNNQLDGE
FMRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf