prot_A-nodosum_M_contig8601.2.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8601.2.2
Unique Nameprot_A-nodosum_M_contig8601.2.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length105
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8601.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 70..83
score: 54.32
coord: 91..104
score: 54.37
NoneNo IPR availablePANTHERPTHR27000LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATEDcoord: 1..88
NoneNo IPR availablePANTHERPTHR27000:SF191LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATEDcoord: 1..88
coord: 30..104
NoneNo IPR availablePANTHERPTHR27000LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATEDcoord: 30..104
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 1..104
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 19..43
e-value: 16.0
score: 11.5
coord: 67..91
e-value: 1.3
score: 18.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..105
e-value: 6.0E-37
score: 129.1
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 22..43
e-value: 0.99
score: 10.2
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 45..104
e-value: 1.3E-11
score: 44.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8601contigA-nodosum_M_contig8601:4144..18083 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8601.2.2mRNA_A-nodosum_M_contig8601.2.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8601 4142..18083 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8601.2.2 ID=prot_A-nodosum_M_contig8601.2.2|Name=mRNA_A-nodosum_M_contig8601.2.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=105bp
LKLWSNKLNGAIPPDLGKLSALQSLDLRVNQLNGAIPPDLGKLSALQSLK
LWSNKLNGAIPPDLGKLSALQSLDLSYNQLDGAIPPDLGKLSALQSLDLS
HNQLD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt