prot_A-nodosum_M_contig86.40.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig86.40.1
Unique Nameprot_A-nodosum_M_contig86.40.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length216
Homology
BLAST of mRNA_A-nodosum_M_contig86.40.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 5.110e-93
Identity = 145/217 (66.82%), Postives = 174/217 (80.18%), Query Frame = 0
Query:    1 MSKLTATFALSTLALTAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPANDAIKLMAEDGDNSALLVLAGSDEVAPFICGAAVDEAPLLPGETTRLSLMVDDEICGDDANFSLVSMLINTNDAFVGIDTADLE---TTKVFPPAYDAGTEENNELCNHIPGPACDPNSGNMEAGPGEGYIHIQRGVHGIA-DLTASVYDWRNPVAEVFVA 213
            M K TA FAL+++   A  T+++VRVRNLTY+QPFSP+LVVAHT+DVALF+EGLPA+DAIKLMAEDGDNSALL LA SD+VAP+ICGA   E P+ PGET R +L +D+  C D   +S+VSMLINTNDAFVGID+ DL    ++KVFPPA+DAGTE NNELC HIPGPAC  +SGNME  PGE +IH+ RG HG+  DL  + YDWRNPVAEVF+A
Sbjct:    1 MVKFTAGFALASVLSLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPV-YSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIA 216          
BLAST of mRNA_A-nodosum_M_contig86.40.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 6.910e-85
Identity = 135/221 (61.09%), Postives = 165/221 (74.66%), Query Frame = 0
Query:    1 MSKLTATFALSTLALTAAVT-------EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPANDAIKLMAEDGDNSALLVLAGSDEVAPFICGAAVDEAPLLPGETTRLSLMVDDEICGDDANFSLVSMLINTNDAFVGID--TADLETTKVFPPAYDAGTEENNELCNHIPGPACDPNSGNMEAGPGEGYIHIQRGVHGIADLTASVYDWRNPVAEVFV 212
            M   TA FA+++L   A  +        ++VRVRNLTY+QPFSP L+VAHT DVALF+EG PANDAIKLMAEDGDNSALL L+ S +VAP+ICG  V E P+ PGET R  L VD  IC +   +S+V+MLINTNDAFVGID  T +L +TK FPPA+DAGTE N+E C++IPGP C   SGN + GPGEGYIH+ RGVHG+ DL  + YDWRNPVAE+++
Sbjct:    1 MVNFTAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPV-YSVVTMLINTNDAFVGIDSDTLELGSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVGDLEEASYDWRNPVAEIYI 220          
BLAST of mRNA_A-nodosum_M_contig86.40.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 1.010e-84
Identity = 130/197 (65.99%), Postives = 158/197 (80.20%), Query Frame = 0
Query:   21 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPANDAIKLMAEDGDNSALLVLAGSDEVAPFICGAAVDEAPLLPGETTRLSLMVDDEICGDDANFSLVSMLINTNDAFVGIDTADLE-TTKVFPPAYDAGTEENNELCNHIPGPACDPNSGNMEAGPGEGYIHIQRGVHGIA-DLTASVYDWRNPVAEVFVASA 215
            E  VRVRNLTY+QPFSP+ VVAHT+DV++F+EG PA+DA+K+MAEDGDNSAL+ L  S++V P+ICG  + EAPL PG+T R  + VD+ IC  DA +S+VSMLINTNDAFVGID+  L  T KVFPPA+DAGTE NNELC HIPGPAC  +SGNME GPGEG+I + RG HG+  DL  + YDWRNPVAEV VA++
Sbjct:    6 EVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESIC-PDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVATS 201          
BLAST of mRNA_A-nodosum_M_contig86.40.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 2.660e-46
Identity = 92/198 (46.46%), Postives = 124/198 (62.63%), Query Frame = 0
Query:   23 RVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPANDAIKLMAEDGDNSALLVLAGSDEVAPFICGAAVDEAPLLPGETTRLSLMVDDEICGDDANFSLVSMLINTNDAFVGIDTA---DLETTKVFPPAYDAGTEENNELCNHIPGPAC--DPNSGNMEAGPGEGYIHIQRGVHGIADLTASVYDWRNPVAEVFVASA 215
            +VRV NLT+ Q FSP ++VAH     LF  G  A  AIKLMAEDG+N  ++ +A  +      CG A  E PLLPG+T    +  D + C +   +S+V+ L NTNDAF+GID +   D   +K+FPPA+DAGTE+NNE C  +PG AC   P S        EG+IH+ RG++G+ DL+ + Y W+NPVAEV V+ A
Sbjct:   76 KVRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPV-YSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVGDLSKADYGWKNPVAEVVVSKA 269          
BLAST of mRNA_A-nodosum_M_contig86.40.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 2.490e-45
Identity = 92/198 (46.46%), Postives = 123/198 (62.12%), Query Frame = 0
Query:   22 YRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPANDAIKLMAEDGDNSALLVLAGSDEVAPFICGAAVDEAPLLPGETTRLSLMVDDEICGDDANFSLVSMLINTNDAFVGIDTA---DLETTKVFPPAYDAGTEENNELCNHIPGPAC--DPNSGNMEAGPG-EGYIHIQRGVHGIADLTASVYDWRNPVAEVFVA 213
            Y+VRV NLT+ Q FSP ++VAH     LF +G  A  AIK MAE+G N  + ++A  ++     CG A  E PLLPG+T    +  D   C     +S+V+ L NTNDAF+GID +   D   +K+FPPA+DAGTE+NNE C  I G AC   P       G G EG+IH+ RG++G+ DL+ + YDW+NPVAEV V+
Sbjct:    4 YKVRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNRFIEIIATRED---GFCGFAAAEGPLLPGKTWNGEITFDANKCKRPV-YSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVGDLSQADYDWKNPVAEVVVS 197          
BLAST of mRNA_A-nodosum_M_contig86.40.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 2.210e-43
Identity = 92/205 (44.88%), Postives = 123/205 (60.00%), Query Frame = 0
Query:   17 AAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVA-LFQEGLPANDAIKLMAEDGDNSALLVLAGSDEVAPFICGAAVDEAPLLPGETTRLSLMVDDEICGDDANFSLVSMLINTNDAFVGIDTA---DLETTKVFPPAYDAGTEENNELCNHIPGPAC--DPNSGNMEAGPGEGYIHIQRGVHGIADLTASVYDWRNPVAEVFVASA 215
            +++  Y+VRV NLT+ Q FSP ++VAH      LF  G  A  AIK MAE+G N  + V+A  +      CG AV E PLLPG+T    +  D   C +   +S+V+ L NTNDAF+GID +   D   +K FPPA+DAGTE+NNE C  +PG AC   P +        EG+IH+ RG+ G+ DL+ + Y W NPVAEV V+ A
Sbjct:   13 SSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVNGMVKVIATRES---GFCGFAVAEGPLLPGKTWNGEITFDTNKCKEPV-YSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVGDLSKADYGWNNPVAEVVVSKA 213          
BLAST of mRNA_A-nodosum_M_contig86.40.1 vs. uniprot
Match: A0A836W2I8_9GAMM (Spondin domain-containing protein n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A836W2I8_9GAMM)

HSP 1 Score: 140 bits (352), Expect = 7.120e-38
Identity = 85/197 (43.15%), Postives = 116/197 (58.88%), Query Frame = 0
Query:   21 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPANDAIKLMAEDGDNSAL-LVLAGSDEVAPFICGAAVDEAPLLPGETTRLSLMVDDEICGDDANFSLVSMLINTNDAFVGIDTADLET----TKVFPPAYDAGTEENNELCNHIPGPACDPNSGNMEAGPGEGYIHIQRGVHGIADLTASVYDWRNPVAEVFV 212
             Y+V + NLT  Q F+P+LV++H + V  F  G PA+DA   +AE GD   L ++++G+ +V        +    L+PGET  +++ VD    G     SL SMLI TND+F+G++             + PAYDAG+E N+ELC  IPGP C    G+  AG GEGY+HI  G+HGI DL    YDWRNPVA+V V
Sbjct:   25 HYKVTITNLTKAQVFTPILVLSHRNGVHPFVVGEPASDAFAALAEGGDIMPLEMMMSGNSKVVDINNSGGL----LMPGET--VTVFVD--ASGHARRISLASMLIPTNDSFIGLNNVVAPRGHGKKTYWVPAYDAGSEPNDELCVSIPGPVCGGEGGSPGAG-GEGYVHISSGIHGIGDLAPETYDWRNPVAKVVV 212          
BLAST of mRNA_A-nodosum_M_contig86.40.1 vs. uniprot
Match: A0A7C1WZB3_9BACT (Spondin domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1WZB3_9BACT)

HSP 1 Score: 137 bits (344), Expect = 1.320e-36
Identity = 87/199 (43.72%), Postives = 117/199 (58.79%), Query Frame = 0
Query:   21 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPANDAIKLMAEDGDNSALLVLAGSD-EVAPFICGAAVDEAPLLPG--ETTRLSLMVDDEICGDDANFSLVSMLINTNDAFVGID----TADLETTKVFPPAYDAGTEENNELCNHIPGPACDPNSGNMEAGPGEGYIHIQRGVHGIADLTASVYDWRNPVAEVFV 212
            E+ V + N+T  Q FSPVLV +H+SD ++F  G  A+  +  +AE+G+N  L +    D  VA    G+ V    +LPG  ET R++      + G     SL  ML+NTNDAFVG+D    T D ETT V   AYDAGTE N+E C  +PGPAC   SG  +  P EGY+++  GV GI DL+  +YDWRNP A + +
Sbjct:   34 EFDVTITNVTRGQIFSPVLVASHSSDTSVFTPGEAASAELAALAEEGNNMPLAMRLSQDANVADVESGSGV----ILPGTSETIRIT------VTGKADRISLAGMLVNTNDAFVGLDSFQITRDPETT-VRALAYDAGTEFNSESCAFVPGPACGA-SGAHDPTPAEGYVYVSNGVQGIGDLSPELYDWRNPAAIITI 220          
BLAST of mRNA_A-nodosum_M_contig86.40.1 vs. uniprot
Match: UPI0019FF46AD (Spondin domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019FF46AD)

HSP 1 Score: 135 bits (339), Expect = 6.850e-36
Identity = 78/197 (39.59%), Postives = 110/197 (55.84%), Query Frame = 0
Query:   21 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPANDAIKLMAEDGDNSALLV-LAGSDEVAPFICGAAVDEAPLLPGETTRLSLMVDDEICGDDANFSLVSMLINTNDAFVGIDTADL----ETTKVFPPAYDAGTEENNELCNHIPGPACDPNSGNMEAGPGEGYIHIQRGVHGIADLTASVYDWRNPVAEVFV 212
             Y V + NLT  Q F+P+LV +H   V +F+ G  A++ +  +AE GD   L   L  +D+V        +    L+PG +  +++             SL SMLI TND+F+ ++        +TT  + P YDAG+E N+E C HIPGP C    G+ EAG GEGY+HI  G+HGIADL A  YDWRNP A++ +
Sbjct:   30 NYEVTITNLTRAQTFTPILVASHREGVKIFELGSAASNELSTLAEGGDVGPLTAALEANDDVVDTANSGGL----LMPGASVTVTVSARHGA----KEISLASMLIPTNDSFIALNGVKAPKGNKTTVYYSPGYDAGSEPNDEDCMHIPGPVCGGAGGSPEAG-GEGYVHISSGIHGIADLAAETYDWRNPTAKIAI 217          
BLAST of mRNA_A-nodosum_M_contig86.40.1 vs. uniprot
Match: A0A8F6CC75_9GAMM (Spondin domain-containing protein n=1 Tax=Methylococcus sp. Mc7 TaxID=2860258 RepID=A0A8F6CC75_9GAMM)

HSP 1 Score: 134 bits (337), Expect = 1.100e-35
Identity = 88/212 (41.51%), Postives = 119/212 (56.13%), Query Frame = 0
Query:    9 ALSTLALTAAVT----EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPANDAIKLMAEDGDNSALLVLAGSDEVAPFICGAAVDEAPLL-PGETTRLSLMVDDEICGDDANFSLVSMLINTNDAFVGIDTADLET---TKVFPPAYDAGTEENNELCNHIPGPACDPNSGNMEAGPGEGYIHIQRGVHGIADLTASVYDWRNPVAEVFV 212
            AL+TLA +  V     EY V + NLT  Q F+PV    H     LF+ G  A+D +  +AE GD + L+   G+D   P +  A      LL PG+T + ++M      G++   SL +MLI TNDAFV +    L +   T V  PAYDAG+E N+ELC +IPGP C    G      GEG++HI  G+HG  +L A+ YDWRNPVA++ V
Sbjct:    8 ALATLAFSNPVLAMDREYEVTITNLTRGQSFTPVFAATHRPGPHLFEVGAKASDDLAALAEGGDTAPLVATFGAD---PAVSEAKTATNSLLGPGQTVKFTVMAKR---GNNYLLSLAAMLIPTNDAFVAVKELRLPSSGETMVMVPAYDAGSEPNDELCANIPGPVCG-GVGLSTGVDGEGFVHIHAGIHGSGELIAADYDWRNPVAKITV 212          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig86.40.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4K4_ECTSI5.110e-9366.82Spondin domain-containing protein n=3 Tax=Ectocarp... [more]
D7FIE5_ECTSI6.910e-8561.09Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7G4K3_ECTSI1.010e-8465.99Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7G3Z4_ECTSI2.660e-4646.46Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G413_ECTSI2.490e-4546.46Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G405_ECTSI2.210e-4344.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836W2I8_9GAMM7.120e-3843.15Spondin domain-containing protein n=1 Tax=Thiotric... [more]
A0A7C1WZB3_9BACT1.320e-3643.72Spondin domain-containing protein n=1 Tax=Planctom... [more]
UPI0019FF46AD6.850e-3639.59Spondin domain-containing protein n=1 Tax=Proteoba... [more]
A0A8F6CC75_9GAMM1.100e-3541.51Spondin domain-containing protein n=1 Tax=Methyloc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009465Spondin, N-terminalPFAMPF06468Spond_Ncoord: 33..140
e-value: 1.2E-6
score: 28.8
IPR038678Spondin, N-terminal domain superfamilyGENE3D2.60.40.2130coord: 13..178
e-value: 1.1E-22
score: 82.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig86contigA-nodosum_M_contig86:829822..838304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig86.40.1mRNA_A-nodosum_M_contig86.40.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig86 829749..838661 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig86.40.1 ID=prot_A-nodosum_M_contig86.40.1|Name=mRNA_A-nodosum_M_contig86.40.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=216bp
MSKLTATFALSTLALTAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALF
QEGLPANDAIKLMAEDGDNSALLVLAGSDEVAPFICGAAVDEAPLLPGET
TRLSLMVDDEICGDDANFSLVSMLINTNDAFVGIDTADLETTKVFPPAYD
AGTEENNELCNHIPGPACDPNSGNMEAGPGEGYIHIQRGVHGIADLTASV
YDWRNPVAEVFVASA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009465Spondin_N
IPR038678Spondin_N_sf