prot_A-nodosum_M_contig86.34.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig86.34.1
Unique Nameprot_A-nodosum_M_contig86.34.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length550
Homology
BLAST of mRNA_A-nodosum_M_contig86.34.1 vs. uniprot
Match: A0A6H5JA94_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA94_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 4.710e-136
Identity = 265/558 (47.49%), Postives = 307/558 (55.02%), Query Frame = 0
Query:   83 PQLEVPSKNYVRHVYSPISGPLWKAVSAVMDWTKERARTLIDLGGVYHKPGDAPATAKPKREVDPQCNVGLGEYLRIFPDPRRYPACTGIDWESAIVYETEDVILANKPAGVPAHATLDNHRENLLAALRVYRPNLEAFLPHRLDIDTSGLMIVAKNREALREINDIIKGPGLELQTGDRSPRARREKKKTLRRKAFYAN--------VQEEG--------------------------------GEKDKADAEKEGWVAKPHGFVRKRYRALVEQVLPGSDPLRASTTPMTHFQKVTRRAPKIFSCGRP-QVFSVVGKR----PDGIEDAEGSWIECRLLVLSVTDA-----LPPPG-ARRLRREPRGDESGHGYDDRNFQEIEVELLTGRTHQIRGQLAAEGCPIYGDLLYGPGALLQNDRSPFLQPLCGQETTPV------------------------------------------AQQLGADNDGL--GSNWLVDFDVEDAGKGYESRRLGPDSFTTSPGLALQAHHISLELE--DG--VLHAFTLDRDTCWW 541
            P+L  P  +YVRH YSP +GPLW +V+A + WT+E AR LI  GGVY+KPG APA+AKPKRE+DP   V +GEYLRIFP PRRYPA  G+DWES IVY+   V+L NKPAGVPAHAT+DN  EN+LA +R  RP L+  LPHRLD DTSGL+IVAK  + LR IN+IIK PGL LQTGD SPR RR K K LRR A  A+        V EE                                 G   +A A + G V    G + KRYRALVE VLPGS PL+AS  P+THFQKV+RRAPK F   RP Q  +    R    P G ED EGSWIECRLLVLS ++A     + P G   R     +G     G      QE+EV+LLTGRTHQIRGQLAAEGCPIYGD LYGP     +   P        ETTP                                           A    A   GL      +    ++   +G E+   G   F  SP +ALQA HISLELE  DG    HAFTL RDTCWW
Sbjct:   63 PRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFPKPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRGVRPGLDLLLPHRLDNDTSGLVIVAKGADTLRSINEIIKRPGLMLQTGDDSPRDRRRKNKALRRAAKLADGTANIKTPVSEEASMTEAAAATESEALPETPQVGRAIPPTQAFATGAGAEAAAAETGAVQNAVGAITKRYRALVE-VLPGSSPLKASPIPLTHFQKVSRRAPKDFRRDRPPQPKATSNARLADTPGGGEDDEGSWIECRLLVLSASEASVSSVVTPAGFPTRTGDSIKGGXXXXGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDNLYGPAVRETSPTGPAEPAATAAETTPAVVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFVLRRSPAPAAAATEPGLVVEEEAVRQVGLQAGFQGDETSCRG--GFVESPKMALQACHISLELEAEDGGRERHAFTLARDTCWW 617          
BLAST of mRNA_A-nodosum_M_contig86.34.1 vs. uniprot
Match: D7G4K2_ECTSI (Putative RNA pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K2_ECTSI)

HSP 1 Score: 398 bits (1023), Expect = 1.580e-129
Identity = 256/542 (47.23%), Postives = 291/542 (53.69%), Query Frame = 0
Query:   83 PQLEVPSKNYVRHVYSPISGPLWKAVSAVMDWTKERARTLIDLGGVYHKPGDAPATAKPKREVDPQCNVGLGEYLRIFPDPRRYPACTGIDWESAIVYETEDVILANKPAGVPAHATLDNHRENLLAALRVYRPNLEAFLPHRLDIDTSGLMIV----------------------AKNREALREINDIIKGPGLELQTGDRSPRARREKKKTLRRKAFYAN--------VQEEGG-----EKDKADAEKE---------------------------------GWVAKPHGFVRKRYRALVEQVLPGSDPLRASTTPMTHFQKVTRRAPKIFSCGRPQVFSVVGKR-----PDGIEDAEGSWIECRLLVLSVTDALPPPGAR------RLRREPRGDESGHGYDDRNFQEIEVELLTGRTHQIRGQLAAEGCPIYGDLLYGPGALLQNDRSPFLQPLCGQETTPVAQQLGADNDGLGSNWLVDFDVEDAGKGYESRRLGPDSFTTSPGLALQAHHISLELE--DG--VLHAFTLDRDTCWW 541
            P+L  P  +YVRH YSP +GPLW +V+A + WT+E AR LI  GGVY+KPG APA AKPKRE+DP   V +GEYLRIFP+PRRYPA  G+DWES IVY+   V+L NKPAGVPAHAT+DN  EN+LA +R  RP+L+  LPHRLDIDTSGL+IV                      AK    LR IN+IIK PGL L+TG  SPR RR K K LRR A   N        V +E           A AE E                                 G V    G + KRYRALV QVLPG  PL+AS  PMTHFQKV+RRAPK F   RP   +          P G ED EGSWIECRLLVLS ++A   P         R     +G     G      QE+EV+LLTGRTHQIRGQLAAEGCPIYGD LYGP    ++ R P LQ              G   D                      R G   F  SP +ALQA HISLELE  DG    H FTL RDTCWW
Sbjct:   39 PRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPALAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRSVRPDLDLLLPHRLDIDTSGLVIVVTRNLGVQELGLARNRTKHAGRAKGAGTLRSINEIIKRPGLILRTGIDSPRDRRRKNKALRRAAKLTNGTANIKTPVYQEASMTAATAASAAAAESEALPETSQVGRAIPPTQAFATGAGXXXXXXXAETGAVENAVGAITKRYRALV-QVLPGRSPLKASPIPMTHFQKVSRRAPKEFRRDRPPQPNATSNARSADTPGGGEDDEGSWIECRLLVLSASEASVSPVVTSAGFPSRTGGSIKGGIGDGGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDYLYGPAE--ESVRQPGLQ-------------AGFQRD------------------ENDSRSG---FVESPKMALQASHISLELEAEDGRRERHVFTLARDTCWW 543          
BLAST of mRNA_A-nodosum_M_contig86.34.1 vs. uniprot
Match: A0A836C7F4_9STRA (Pseudouridine synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7F4_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.890e-29
Identity = 58/147 (39.46%), Postives = 86/147 (58.50%), Query Frame = 0
Query:   92 YVRHVYSPISGPLWKAVSAVMDWTKERARTLIDLGGVYHKPGDAPATAKPKREVDPQCNVGLGEYLRIFPDPRRYPACTGIDWESAIVYETEDVILANKPAGVPAHATLDNHRENLLAALRVYRPNLEAFLPHRLDIDTSGLMIVAK 238
            Y RH Y+P     W+ +  V+   + RAR +I  GG Y  P   P   K +R  DP   +  G+Y+RI P PR+YP C   DW+++++ E +  +L NKPA VP+H T+DN   N++A L+  RP  +    HRLD+ TSGL+++ K
Sbjct:   11 YARHAYAPSDAAAWQVLVDVLGVDESRARYIIVFGGFYLMP---PGDVKARRVSDPTHAMTKGQYMRIHPMPRQYPVCATTDWDASVLQENDWCMLVNKPAAVPSHPTVDNLHHNVVACLKPLRPGTQISAAHRLDVATSGLIVMCK 154          
BLAST of mRNA_A-nodosum_M_contig86.34.1 vs. uniprot
Match: A0A6U0VH21_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VH21_9STRA)

HSP 1 Score: 121 bits (304), Expect = 3.390e-27
Identity = 100/312 (32.05%), Postives = 134/312 (42.95%), Query Frame = 0
Query:  140 KPKREVDPQCNVGLGEYLRIFPDPRRYPACTGIDWESAIVYETEDVILANKPAGVPAHATLDNHRENLLAALRVYRPNLEAF-----LPHRLDIDTSGLMIVAKNREALREINDIIKGPGLELQTGDRSPRARREKKKTLRRKAFYANVQEEGGEKDKADAEKEGWVAKPHGFVRKRYRALVEQVLPGSDPLRAST-TPMTHFQKVTRRAPKIFSCGRPQVFSVVGKRPDGIEDAEGSWIECRLLVLSVTDALPPPGARRLRREPRGDESGHGYDDRNFQEIEVELLTGRTHQIRGQLAAEGCPIYGDLLYG 445
            +P+R +DP   +  G+Y+R++P P RYP   GIDW+  I+    D ++ +KPAG+P+HAT DN REN L  LR++    EAF     LPHRLDIDTSG++I AK+  A   I                                  A++Q   GEK                    RY A V++     +P        + HFQ      P  F                  +DA+     C L+V             ++ RE          D+ N   + V LLTGRTHQIRGQL+A G PI GD LYG
Sbjct:   38 RPERVLDPGFPLEPGDYVRVYPVPARYPEALGIDWDKRILRMDADFVVVDKPAGIPSHATKDNLRENTLEQLRLHFAG-EAFSDALRLPHRLDIDTSGVLIAAKSGAACGRI---------------------------------AASLQAASGEK--------------------RYAARVQRDESREEPCSLHDGLRLEHFQLRQTHGPHRFVTSS--------------DDADAK--HCALVV------------EKVHRE--------SSDEAN---VSVRLLTGRTHQIRGQLSAVGWPIVGDNLYG 256          
BLAST of mRNA_A-nodosum_M_contig86.34.1 vs. uniprot
Match: A0A1Z5J8W1_FISSO (PseudoU_synth_2 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8W1_FISSO)

HSP 1 Score: 112 bits (281), Expect = 1.310e-22
Identity = 127/456 (27.85%), Postives = 190/456 (41.67%), Query Frame = 0
Query:   89 SKNYVRHVYSPISGPL-WKAVSAVMDWTKERARTLIDL--------GGVYHKPGDAPATA----KPKREVDPQCNVGLGEYLRIFPDPRRYPACTGIDWESAIVYETED---VILA----------NKPAGVPAHATLDNHRENLLAALR-VYRPNLEAFLPHRLDIDTSGLMIVAKNREALREINDIIKGP-GLELQTGDRSPRARREKKKTLRRKAFYANVQEEGGEKDKADAEKEGWVAKPHGFVRKRYRALV-------EQVLPGS---DPLRASTTPMTHFQKVTRRAPKIFSCGRPQVFSVVGKRPDGIEDAEGSWIECRLLVLSVTDALPPPG-----ARRLRREPRGDESGHGYDDRNFQEIEVELLTGRTHQIRGQLAAEGCPIYGDLLYGPGALLQNDRSPFLQPLCGQETTPVAQQLGADNDGLGSNWLVDFDVEDAGKGYESRR 501
            +  +V HV     G   ++ VS V+   K    T+ DL        G V+  P DAP       KP R  + + ++  G+YLR+  +PRR+PA    DW +   Y + D   +I+A          +KP  VP H T+DN REN+ + L  V R  +    P RLD +TSGL++V+ ++       D+++    L+L+                         QE    +D               ++ K+YR LV         +L  +     LR S   + H+ + + RAPK F                  E  + +W+EC L +   +D     G     A  L   P  D        +   E+E+ELLTGRTHQ+RGQL+A G PI GD  YG GA+ Q+  S     +  Q++  +A Q  A           D D+ +   G ES R
Sbjct:   63 TSGFVSHVLVEEEGSTSFEQVSRVLTARKHANDTVTDLNALELMRLGAVWFLPFDAPRDPSKGIKPVRLFENR-DLQPGDYLRVHHNPRRFPAVKKYDWSAFKSYASSDKPGIIVARNATKGWMVIDKPPNVPVHMTVDNSRENVASCLEEVLRSYVTT--PQRLDQNTSGLLVVSTSKVFANYYADLLRHKTALQLEVNQ---------------------TQETEHFRD---------------YIHKKYRCLVCLQEDDDRSILEAARELQQLRGSI--IRHYLEPSIRAPKHFVA----------------ETFDSAWLECLLRITGTSDVYALVGHGQELANNLWSCPAEDRPP---SCQAVMELEIELLTGRTHQVRGQLSAMGFPIVGDTQYG-GAIPQSVPSRSSDGVDFQDSAQLALQCCALE-------FADPDIVEKSDGTESMR 450          
BLAST of mRNA_A-nodosum_M_contig86.34.1 vs. uniprot
Match: A0A1W9HTX9_9PROT (PseudoU_synth_2 domain-containing protein n=1 Tax=Proteobacteria bacterium SG_bin7 TaxID=1827384 RepID=A0A1W9HTX9_9PROT)

HSP 1 Score: 105 bits (262), Expect = 6.930e-22
Identity = 86/324 (26.54%), Postives = 129/324 (39.81%), Query Frame = 0
Query:  122 LIDLGGVYHKPGDAPATAKPKREVDPQCNVGLGEYLRIFPDPRRYPACTGIDWESAIVYETEDVILANKPAGVPAHATLDNHRENLLAALRVYRPNLEAFLPHRLDIDTSGLMIVAKNREALREINDIIKGPGLELQTGDRSPRARREKKKTLRRKAFYANVQEEGGEKDKADAEKEGWVAKPHGFVRKRYRALVEQVLPGSDPLRASTTPMTHFQKVTRRAPKIFSCGRPQVFSVVGKRPDGIEDAEGSWIECRLLVLSVTDALPPPGARRLRREPRGDESGHGYDDRNFQEIEVELLTGRTHQIRGQLAAEGCPIYGDLLYG 445
            L++LG VY               ++   N+  G+YLR+   P+RYP    I+WE  I++E +D+I+ +KP G+P HATLDN  EN+L  +  ++ N + +  HRLDI T G++I+ K  E+ +EIN+      +                     K +Y                           V K   +LV Q L              H+ + ++RAPKI S                   A  ++  C L++                                  E  +EL+TGR+HQIR QL+  G PI GD LYG
Sbjct:   23 LLELGAVYLN----------HHRLNSNKNLKPGDYLRVHTQPKRYPTHK-INWEQTIIHEDKDLIVIDKPYGIPVHATLDNAIENVLTQMSKFK-NQKLYHTHRLDIGTQGILILTKTPESQKEINNQFLNKRI---------------------KKYY---------------------------VAKTDLSLVPQKL-------------IHYMQPSKRAPKILS-----------------NKALPNYKRCELII---------------------------------HEDNIELITGRSHQIRAQLSTIGAPIIGDTLYG 223          
BLAST of mRNA_A-nodosum_M_contig86.34.1 vs. uniprot
Match: A0A1Z5JS59_FISSO (PseudoU_synth_2 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS59_FISSO)

HSP 1 Score: 105 bits (263), Expect = 2.350e-20
Identity = 109/405 (26.91%), Postives = 168/405 (41.48%), Query Frame = 0
Query:   89 SKNYVRHVYSPISGPL-WKAVSAVMDWTKERARTLIDL--------GGVYHKPGDAPATA----KPKREVDPQCNVGLGEYLRIFPDPRRYPACTGIDW---ESAIVYETEDVILA----------NKPAGVPAHATLDNHRENLLAALRVYRPNLEAFLPHRLDIDTSGLMIVAKNREALREINDIIKGPGLELQTGDRSPRARREKKKTLRRKAFYANVQEEGGEKDKADAEKEGWVAKPHGFVRKRYRALV-------EQVLPGS---DPLRASTTPMTHFQKVTRRAPKIFSCGRPQVFSVVGKRPDGIEDAEGSWIECRLLVLSVTDALPPPG-----ARRLRREPRGDESGHGYDDRNFQEIEVELLTGRTHQIRGQLAAEGCPIYGDLLYGPGALLQN 452
            +  +V HV     G   ++ VS V+   K    T+ DL        G V+  P DAP       KP R  + +  +  G+YLR+  +PRR+PA    DW   +S +  +   +I+A          +KP  VP H T+DN REN+ + L     +     P RLD +TSGL++V+ ++       D+++                        + A    + +    +   D            ++ K+YR LV         +L  +     LR S   + H+ + + RAPK F                  +  + +W+EC L +   +D     G     A  L   P  D        +   E+E+ELLTGRTHQ+RGQL+A G PI GD  YG GA+ +N
Sbjct:   63 TSGFVSHVLVEEKGSTSFEQVSQVLTERKNANDTVTDLNALELMRLGAVWFLPFDAPRDPAKGIKPVRLFEDR-ELQPGDYLRVHHNPRRFPAVQKYDWSAFKSDVSSDKPGIIVARNTTMGWMVIDKPPNVPVHMTVDNSRENVASCLEEVLCSYVT-TPQRLDQNTSGLLVVSTSKVFANYYADLLR-----------------------HKTALQLELNQTQDTEHSRD------------YIHKKYRCLVCLREDDSRSILEAARELQQLRGSI--VRHYLEPSIRAPKHFVA----------------QTTDSTWLECLLRITGTSDVYALVGHGQELANNLWSCPAEDRPP---SCQAVIELEIELLTGRTHQVRGQLSAMGFPIVGDTQYG-GAIPKN 408          
BLAST of mRNA_A-nodosum_M_contig86.34.1 vs. uniprot
Match: A0A7S4AGN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AGN3_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.200e-20
Identity = 98/304 (32.24%), Postives = 140/304 (46.05%), Query Frame = 0
Query:  168 ACTGIDWESAIVYETEDVILANKPAGVPAHATLDNHRENLLAALRVYRPNLEAFLPHRLDIDTSGLMIVAKNREALREINDIIKGPGLELQTGDRSPRARREKKKTLRRKAFYANVQEEGGEKDKADAEKE-----GWVAKPHGFVRKRYRALVEQVLPGS-DPLRASTTP----MTHFQKVTRRAPKIFSCGRPQVFSVVGKRPDGIEDAEGS----WIECRLLVLSVTDALPPPGARRLRR---------EPRGDE--SGHGYDDRNF--QEIEVELLTGRTHQIRGQLAAEGCPIYGDLLY 444
            +CT   W+ A  +      + NKPAG+P+H T+DN  ENLL   + +R    A LP RLD +TSGL+++A N +     + +++    +  T  ++         T + KA  A         D A A  +        ++    ++KRYR LV      + D +R         + HF     +APK F        ++VG   D   D  GS    W+ CRL + S++  + P    +LR           P G E  S    D +     E+E+ELLTGRTHQIRGQLAA GCPI GD LY
Sbjct:  149 SCTA--WDPAFAFA-----VLNKPAGLPSHPTVDNAVENLLYQYQRHRRLTYASLPQRLDTETSGLIVIATNPKTASYFSKLLERKTADAVTAIQA---------TTKEKAIAAT--------DTAVAAADVSLSLSSASRLQTSIQKRYRCLVSFSSGEAWDSIRKRYQEPGSIVEHFVDANSKAPKTFVADTNH--NMVGGGDDHDHD-NGSKKRRWLLCRLRIRSMSPPMIPQQRLQLREYVRVPQVVPPPAGGETVSVSQADSQTACCSELEIELLTGRTHQIRGQLAALGCPIVGDPLY 425          
BLAST of mRNA_A-nodosum_M_contig86.34.1 vs. uniprot
Match: UPI0019A26861 (RluA family pseudouridine synthase n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=UPI0019A26861)

HSP 1 Score: 100 bits (250), Expect = 5.080e-20
Identity = 92/355 (25.92%), Postives = 132/355 (37.18%), Query Frame = 0
Query:   93 VRHVYSPISGPLWKAVSAVMDWTKERARTLIDLGGVYHKPGDAPATAKPKREVDPQCNVGLGEYLRIFPDPRRYPACTGIDWESAIVYETEDVILANKPAGVPAHATLDNHRENLLAALRVYRPNLEAFLPHRLDIDTSGLMIVAKNREALREINDIIKGPGLELQTGDRSPRARREKKKTLRRKAFYANVQEEGGEKDKADAEKEGWVAKPHGFVRKRYRALVE--QVLPGSDPLRASTTPMTHFQKVTRRAPKIFSCGRPQVFSVVGKRPDGIEDAEGSWIECRLLVLSVTDALPPPGARRLRREPRGDESGHGYDDRNFQEIEVELLTGRTHQIRGQLAAEGCPIYGDLLYG 445
            V+H  +P SG L   +S ++D  +     L+ LG VY             R V+    +   + LR+   PRR+      DW   IV+E +D IL NKPAGVP+H ++DN  +N L  L   R  ++  + HRLD  T GL++  K    ++  N          Q   R                                             + K+Y AL+E  Q LP           + H+ + + RAPK  S                   A   W  C L +L                     +  H         ++++LLTGRTHQIR QLA  G P+ GD +YG
Sbjct:   14 VKHFINPKSGSLLNLISEILDKPESEVSDLLKLGAVY---------VNNVRHVE-NSTINENQTLRVHTKPRRFNC--EYDWSQRIVFECDDFILLNKPAGVPSHPSVDNVLDNSLFKLSEAR-QVKLHITHRLDTMTEGLIVYGKTLAFVKNFN---------FQMSQRQ--------------------------------------------IEKKYVALIETKQTLPEK---------IIHYMEPSPRAPKTVS-----------------PVAHEGWAFCELHILK--------------------QKKHALGSW----VQIQLLTGRTHQIRSQLAQLGAPLLGDEIYG 252          
BLAST of mRNA_A-nodosum_M_contig86.34.1 vs. uniprot
Match: K0TC93_THAOC (PseudoU_synth_2 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TC93_THAOC)

HSP 1 Score: 103 bits (256), Expect = 2.140e-19
Identity = 115/390 (29.49%), Postives = 158/390 (40.51%), Query Frame = 0
Query:  103 PLWKAVSAVMDWTKER---ARTLIDLGGVYHKP----------GDAPATAKPKREVDPQCNVGL--GEYLRIFPDPRRYPACTGIDW-----------ESAIVYETEDVI---LANKPAGVPAHATLDNHRENLLAALRVYRPNLEAFLPHRLDIDTSGLMIVAKNREALREINDII--KGPGLELQTGDRSPRARREKKKTLRRKAFYANVQEEGGEKDKADAEKEGWVAKPHGFVRKRYRALVEQVLPGSDPLRASTTP-------MTHFQKVTRRAPKIFSCGRPQVFSVVGKRPDGIEDAEGS-WIECRLLVLSVTDALPPPGARRLRREPRGDESGHGYDDRNFQ--EIEVELLTGRTHQIRGQLAAEGCPIYGDLLYGPGALLQ 451
            P +++ SA++  T  +   A  L  LG V++ P           D+    KP R      N+ +  G+YLR+  DPRR+      DW           +  +V E  D I   + NKP GVP HA +DNH EN+ A     R     +   + D+   G  I  K+ +  R        K   + + T  R  +          +K F A   E   +K  A   + G        V K YR LV  + PG++   AS          M H+ + + RAPK F    P              DAE + W E  L +  V       G              HG         E+E+ELLTGRTHQIRGQLAAEG P+ GD+ YG GA+ Q
Sbjct:  163 PGFRSDSAMLPQTSSQQLTAHELFALGSVWYLPLNATKKGVDRFDSQNGVKPIRLTVGALNMTVQGGDYLRVHFDPRRFCVANSYDWLAQDGTMGSDNKPGVVVERNDKIGYMILNKPRGVPIHARVDNHLENVAA-----RIGRMLWQERKEDVSLQGQSIKPKDNDNKRRRRGKTEKKQHAIYVATPQRLDQNTSGLVAVATKKCFAAYFAELLRKKTSAQLSQGGSSRSDDCKVHKAYRCLV-CLSPGAESSMASEVKKLKDYGIMRHYLEPSIRAPKRFLADIPH-------------DAESAAWAESLLTITRVGQVCTVVGNEPSETLSENLWGIHGRPQGCIAVCELEIELLTGRTHQIRGQLAAEGFPLVGDVQYG-GAVAQ 532          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig86.34.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA94_9PHAE4.710e-13647.49PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
D7G4K2_ECTSI1.580e-12947.23Putative RNA pseudouridylate synthase n=1 Tax=Ecto... [more]
A0A836C7F4_9STRA1.890e-2939.46Pseudouridine synthase (Fragment) n=1 Tax=Tribonem... [more]
A0A6U0VH21_9STRA3.390e-2732.05Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A1Z5J8W1_FISSO1.310e-2227.85PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A1W9HTX9_9PROT6.930e-2226.54PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A1Z5JS59_FISSO2.350e-2026.91PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A7S4AGN3_9STRA3.200e-2032.24Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
UPI0019A268615.080e-2025.92RluA family pseudouridine synthase n=1 Tax=Bdellov... [more]
K0TC93_THAOC2.140e-1929.49PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 184..433
e-value: 1.0E-15
score: 58.2
IPR006145Pseudouridine synthase, RsuA/RluA-likeCDDcd02869PseudoU_synth_RluA_likecoord: 185..448
e-value: 1.52503E-25
score: 101.645
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 172..527
e-value: 1.3E-31
score: 111.9
NoneNo IPR availablePIRSRPIRSR606225-1PIRSR606225-1coord: 174..250
e-value: 7.1E-16
score: 56.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..408
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 143..518
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 172..453

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig86contigA-nodosum_M_contig86:752157..763401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig86.34.1mRNA_A-nodosum_M_contig86.34.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig86 752142..763720 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig86.34.1 ID=prot_A-nodosum_M_contig86.34.1|Name=mRNA_A-nodosum_M_contig86.34.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=550bp
MPLRHRESFRSMFAGLMATPNPRSPSTRNTPSARLCRKLCRHHRELKTLV
PMLEQERRLNQLRDNTKLDELGDWRAKAGKGSPQLEVPSKNYVRHVYSPI
SGPLWKAVSAVMDWTKERARTLIDLGGVYHKPGDAPATAKPKREVDPQCN
VGLGEYLRIFPDPRRYPACTGIDWESAIVYETEDVILANKPAGVPAHATL
DNHRENLLAALRVYRPNLEAFLPHRLDIDTSGLMIVAKNREALREINDII
KGPGLELQTGDRSPRARREKKKTLRRKAFYANVQEEGGEKDKADAEKEGW
VAKPHGFVRKRYRALVEQVLPGSDPLRASTTPMTHFQKVTRRAPKIFSCG
RPQVFSVVGKRPDGIEDAEGSWIECRLLVLSVTDALPPPGARRLRREPRG
DESGHGYDDRNFQEIEVELLTGRTHQIRGQLAAEGCPIYGDLLYGPGALL
QNDRSPFLQPLCGQETTPVAQQLGADNDGLGSNWLVDFDVEDAGKGYESR
RLGPDSFTTSPGLALQAHHISLELEDGVLHAFTLDRDTCWWAHACGAQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf