prot_A-nodosum_M_contig859.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig859.5.1
Unique Nameprot_A-nodosum_M_contig859.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length826
Homology
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: D8LDN2_ECTSI (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN2_ECTSI)

HSP 1 Score: 1400 bits (3623), Expect = 0.000e+0
Identity = 732/805 (90.93%), Postives = 760/805 (94.41%), Query Frame = 0
Query:    1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGGGVELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------DAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMNPLRLKGTMLDMRKVADRNRDKTGKEQRDPSEI 792
            MR DLDGLDVFFPY+FMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCI+ELKRVI YR   LGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAE GGGG ELCEFFEGY+ NGSDA MPNGIYSLDDLK+FG+EKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVA+MKRTDQARLN EY+RLVSGLA+SGLGR+S         XXXXXXXXXXXXXXXXXXXXX             DAIPANPALPADILQEAVPGNIRRAEHFVSF+RKVVEHFK+RVRVQSVESETPLAFVHR+QQVTALERKPLKF YSRLNSLLRTLEVTGLDDFRPLVDVADFATLV TY+EGFAVVIEPTGSVVPGVYEPVMRLACLDASLAI+PVFERFASVVITSGTLSPLDLYPKLLGF PVVRTALSMSTVRKCICPLVVTRGSDQL MSTKFDQRDDPSVVRNYGAL+IE A+IVPDG+VCFFTSYSYME IVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGA+FLSVARGKVAEGIDFDRHYGRAV+MFGVPFQYTLSHVLRARLEYLR+TFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLV+LADSRYNRHDKRSKLPGWVLQFL E HLNMS+D A AMARMFLKDMAQP++PLRLKGTMLD +KVA RNR+KTGKEQR+ SE+
Sbjct:    1 MRLDLDGLDVFFPYDFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGG-ELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVAAAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFVHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASVVITSGTLSPLDLYPKLLGFSPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALMIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAIFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRSTFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLDETHLNMSADNAAAMARMFLKDMAQPLDPLRLKGTMLDTKKVAARNREKTGKEQRNASEL 804          
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: A0A836CJZ4_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ4_9STRA)

HSP 1 Score: 1160 bits (3002), Expect = 0.000e+0
Identity = 579/811 (71.39%), Postives = 668/811 (82.37%), Query Frame = 0
Query:    1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA-----EGGGGG--------------------------------VELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMNPLRLKGTMLDMRKV 774
            M F L  + V+FPY++ YPEQY YM ELK +LDAKGHCLLEMPTGTGKTVCLI+LIT+YQ+ HPEVGKLIYCTRTVPEM+KC++E+KRVI YR + LGP G KVLALCLSSRRNLCIH+RV+E++DREAVDGACRDMTASWVR++A     +GG  G                                +ELC+F+E Y  NGSD++MP+GIYS++DLK FGREKGWCPYFLARH+INHAN+LVYNYQYMLDPKVAG+VSRELEAESVVVFDEAHNIDNVCTEALSV L++ +L+AASRCLG++SSKV DMK+ DQ RLNEEY+RLV+GLA++  G                                 + + ANPALPAD+L EAVPGNIRRAEHFVSFLRK++EH K R+R  +VESETPLAF+HRLQQ T +ERKPL+FTYSRLNSLLRTLEVT LDDFRPL  VADFATLV+TY EGFA+VIEP GSV+PGVYEPV++LACLDASLAIKPVFERF SVVITSGTLSP+DLYPKLL F PVVR++L MST R+CICPLVVTRGSDQL++STKFD R+DPSVVRNYG+L+IE A+ +PDGIVCFFTSYSYME IV++W E GVL +V EKKLIF+ETKDVVETTLALDNFKRACD GRGA+F SVARGKVAEGIDFDRHYGR V+MFGVPFQYTLSHVLRARLEYLRATFQIRE DFL FDA+RQ AQC+GRVIRSKTDYGL+VLADSRYNRHDKRSKLP W+ QFL+E HLN+S+D A+++ RMFLK+MAQP++  +LK  + D  KV
Sbjct:    1 MIFTLGDITVWFPYDYCYPEQYAYMSELKTTLDAKGHCLLEMPTGTGKTVCLIALITAYQYQHPEVGKLIYCTRTVPEMVKCVEEIKRVIRYREEQLGPAGSKVLALCLSSRRNLCIHQRVLEDADREAVDGACRDMTASWVRQRAGVKRDKGGARGANGXXXXXXXXXXXXXXXXXXXXAQGGEVDASIELCQFYEEYDANGSDSVMPSGIYSIEDLKDFGREKGWCPYFLARHVINHANILVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVQLNRHNLEAASRCLGRVSSKVTDMKQHDQRRLNEEYQRLVNGLADNAAG----------------------PLPAGVQGIADNNMLANPALPADVLAEAVPGNIRRAEHFVSFLRKLIEHLKVRIRATNVESETPLAFLHRLQQNTTIERKPLRFTYSRLNSLLRTLEVTNLDDFRPLSAVADFATLVATYQEGFAIVIEPEGSVIPGVYEPVLQLACLDASLAIKPVFERFGSVVITSGTLSPIDLYPKLLNFHPVVRSSLPMSTFRRCICPLVVTRGSDQLAISTKFDLREDPSVVRNYGSLIIELAAAIPDGIVCFFTSYSYMERIVAQWQESGVLSKVYEKKLIFLETKDVVETTLALDNFKRACDSGRGAIFFSVARGKVAEGIDFDRHYGRCVVMFGVPFQYTLSHVLRARLEYLRATFQIREADFLNFDALRQAAQCVGRVIRSKTDYGLMVLADSRYNRHDKRSKLPPWITQFLTESHLNLSTDMAISLTRMFLKEMAQPIDRDQLKTILCDAHKV 789          
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: K8YZX4_NANGC (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZX4_NANGC)

HSP 1 Score: 1068 bits (2762), Expect = 0.000e+0
Identity = 536/827 (64.81%), Postives = 658/827 (79.56%), Query Frame = 0
Query:    1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGGGVELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESG-LGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPA--LPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMNPLRLKGTMLDMRKVAD----RNRDKTGKEQRDPSEIVNAGAFVSAPRGGGGSSGTVGNGRRRID 820
            +RFDLDGLD+FFPY+ +Y EQY+YMLELKR+LDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEM+KC++E+++VI YR + +G EG KVLA+CLSSRRNLCIHERV+EESDREAVD ACR MTASWVR++       VELC+++E Y  NG+DA + +GIYSLDDLK+ G+++GWCPYFLARHIINHAN+L+YNYQY+LDPKVAG+VS+ELEAES+VVFDEAHNIDNVC EALSV+LD+RSLD A+RCLGK+S++V+ MK+ D  +LNEEY+RLV GLAESG LG ++                              DA+ ANP   LP  + QEAVPGNIRRAEHF++F++KVVEH K+ +RV S + ++PLAF+H LQ  TALE KPL+FTYSRLNSLLRTLEVT LD+F PL DVADFATLV+TY+EGF V+ EP GS +PG+ +PV++L+CLDASLAIKPVFERF SV+ITSGTLSPLDLYP LL F PVVR ++ MS  RK ICPLVVT+GS Q  ++T+F++RDDPSV R+YG LL+E A+ VPDG+VCFFTSYSYME +V +W++ G+L+++LE+KLIFIETKDVVETTLALDNF+RACD GRGA+FLSVARGKVAEGIDFDRHYGRAV++ GVPFQYTLS V+R RLEYL+  F I   DFLTFDA+RQ AQC+GRVIRSK DYGL++ ADSRYNR+DKR+KLP W+L  +   HL++S+  A+   R FLK+MAQPM+   L+  +LD  ++A+      R   G + R+    +      + P    G +G    GR  +D
Sbjct:    2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSAN-VELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPA---------------------DAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGXXXXGRGSVD 806          
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: A0A7S2D9H7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D9H7_9STRA)

HSP 1 Score: 1035 bits (2675), Expect = 0.000e+0
Identity = 514/764 (67.28%), Postives = 612/764 (80.10%), Query Frame = 0
Query:    3 FDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEG--EKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGGGVELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRV----RVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMN 760
            F L+G+DV+FPY+ MYPEQY YMLE+K +LDAKGH LLEMPTGTGKT C++SL+ SYQ AHPE+GKLIYCTRTVPEM KCI ELKRV+     H+G  G    +LALCLSSRRN+CIHE V+E +DREAVD  CRDMTASWVR+KA+   G VE C+F+E Y   GSDA +PNGI+SLDDLK  GREKGWCPYFLARH+INHA VLVYNYQYMLDPKVAGMVSRELE+ESVV+FDEAHNIDNVC EALSV LD+RS+ AA + L  IS+KV ++K  D +RL +EYRRLV+GL +   G++                               D I ANP+LPAD+L EAVPGNIRRAEHFVSFLR ++ H + R+       +VE+ETPLAFVHRL   T  E KPLKF YSRLNSLLRTLEVT LD + PL DV D  TLV+TYS+GFA+VIEP GS++PGVYEP ++LACLDAS+AIKPVFERF+SV+ITSGTLSPLDLYP+LL FQPV+R +L MS  R  ICPLV+T+GSDQ  +ST+F+ RD+P VVRNYGALL++ AS +PDGIV FFTSY YME IV +WD L V +R+LEKKL+FIETKDVVETT+AL+N+KRAC+CGRGAVFLSVARGKVAEGIDFD+HYGR VM+ GVP+QYTLSH+LRARLEYLR TFQIRE DFLTFDA+RQ AQC+GRV+RSK DYG++V ADSRYNR+DKRSKLP W+ QFL   HL++S+D A+ + + F+++M QP++
Sbjct:   44 FKLEGMDVYFPYKKMYPEQYKYMLEMKHALDAKGHGLLEMPTGTGKTACVLSLVVSYQLAHPEMGKLIYCTRTVPEMSKCIGELKRVVQNILAHVGQAGAASSLLALCLSSRRNMCIHETVMEAADREAVDSLCRDMTASWVRQKAQASPGSVETCDFYEEYDKAGSDAAIPNGIFSLDDLKVLGREKGWCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGLNDGAGGQT-------------------------------DTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLVATYSKGFAIVIEPNGSIIPGVYEPTLQLACLDASIAIKPVFERFSSVIITSGTLSPLDLYPRLLNFQPVIRVSLDMSVFRTPICPLVITQGSDQAQISTRFEVRDEPGVVRNYGALLLDLASTIPDGIVVFFTSYMYMEKIVFEWDRLQVFERLLEKKLVFIETKDVVETTMALENYKRACNCGRGAVFLSVARGKVAEGIDFDQHYGRCVMLIGVPYQYTLSHILRARLEYLRTTFQIREADFLTFDALRQAAQCVGRVMRSKKDYGVMVFADSRYNRYDKRSKLPPWIQQFLKASHLSLSTDMALDIIKGFMREMGQPID 776          
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: A0A7R9U4D1_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4D1_9STRA)

HSP 1 Score: 994 bits (2569), Expect = 0.000e+0
Identity = 488/775 (62.97%), Postives = 601/775 (77.55%), Query Frame = 0
Query:    1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGGGVELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMNPLRLKGTMLDMRKVA 775
            MRF L+ +DVFFPY  +Y EQ+DYM+ELKR+L+A GH  LEMPTGTGKTVCL+SLITS QFA PE+GK IYCTRTVPEM+KC++ELKRV+ YRA+ +G EG K+LALCLSSRRN+CIH+RV+EESDREAVD ACR MTASWVRK+A+ G   VELCEF+E Y  NG+D  +P GIYSL+DL+  GRE+GWCPYFLARH++ HANVL+YNYQYMLDPKVAG+VS ELE +SVVVFDEAHNIDNVC EA+SV + +  LDA++R LG ++SKV +MK +D  RLN EY+RLVSGLA SG    S                              D+I +NP+LPADIL E+VPGNIR+AEHF++F+RK+V H K ++R    + ETP AF+H+L ++T LE KP+KFTYSRLNSLLRTLEVT LDD   L ++ADFATL++TY EGFAVV+EP  S++PG+ EPV+ L+CLDASLAIKPVF+RF SV+ITSGTLSP+DLYP++L F PVV ++L MS  R  ICPL+VTRG +   MS+ F  R+D  V+ NYG LL++   IVPDG+V FF SY +ME  + KWDELG+L++V   KL+FIETKDVVETTLALDNF+RAC+CGRG VFLSVARGKVAEGIDFDRH GRAV+MFGVPFQYT S  L+ARL++L   FQI E DF+TFDA+RQ +QC GRV RSKTDYGL++ ADSRYN+  KR KLP W+ QFL + H N+S     +  R FL++MAQP++       +LD  K++
Sbjct:   45 MRFRLEDVDVFFPYPSVYREQFDYMVELKRALEAPGHAALEMPTGTGKTVCLMSLITSVQFARPEMGKFIYCTRTVPEMVKCVEELKRVVNYRAECVGAEGRKILALCLSSRRNMCIHDRVLEESDREAVDAACRSMTASWVRKRAQEGAS-VELCEFYEQYDANGTDTAIPYGIYSLEDLRDLGRERGWCPYFLARHVLKHANVLIYNYQYMLDPKVAGLVSSELEEDSVVVFDEAHNIDNVCIEAMSVQISRPILDASTRSLGALASKVEEMKASDVERLNAEYQRLVSGLAMSGPAPGSYTVAT-------------------------DSILSNPSLPADILAESVPGNIRKAEHFLTFMRKIVRHLKDQLRNPEAKWETPQAFLHQLHEMTGLEAKPMKFTYSRLNSLLRTLEVTSLDDHSDLAEIADFATLLATYQEGFAVVLEPDSSIIPGLTEPVLELSCLDASLAIKPVFKRFKSVIITSGTLSPIDLYPRILDFSPVVSSSLPMSIFRSSICPLIVTRGDNMTKMSSAFGVRNDDRVISNYGKLLVDTCRIVPDGVVVFFPSYLFMEGTIVKWDELGILRQVSNYKLLFIETKDVVETTLALDNFRRACECGRGGVFLSVARGKVAEGIDFDRHLGRAVLMFGVPFQYTKSLTLKARLDFLHTRFQINEADFITFDAMRQASQCAGRVFRSKTDYGLMIFADSRYNQESKRQKLPPWIRQFLGDAHCNLSITQTASKMRRFLREMAQPVDDEARSSVLLDSSKIS 793          
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: K3WFP6_GLOUD (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFP6_GLOUD)

HSP 1 Score: 989 bits (2557), Expect = 0.000e+0
Identity = 485/761 (63.73%), Postives = 600/761 (78.84%), Query Frame = 0
Query:    1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGGGVELCEFFEGYATNGSD-AIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMN 760
            MR ++DGL+V FPYE MY EQ  YM ELKR+LDA GHC+LEMPTGTGKTV L+SL+ +Y+FAHP  GKLIYCTRTVPEM KC++ELK ++AYR ++ G   + + A+CLSSRRN+C+H RV+  +D EAVDG CR MTASWVR KA    G VE+C F+E Y +  SD  ++P GIY++DDLK+ G +KGWCPYFL R++++ A+V+VYNYQYMLDPKV+ MVSR  E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L  ISS+V  MK+ D+ARL+ EYRRLV GL  S                                    D + ANP LP D+L EA+PGNIRRAEHF++F+R+++E+ ++R+RV++VESETP AF+H L Q  ++E KP+KF Y+RLNSL+RTLEVT L++F  L  VADFATLV+TY++GF ++IEP      GV++PV++LACLDASLAI+PVFERF+SV+ITSGTLSP+DLYP+LL F PV+R +L MS  R CICP+V+TRGSDQ+ +STKFD RDD SVVRNYG LL+E A+  PDG+VCFF SY YME I+ +WD LGVLKRVL+ KL+FIET D+VETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGL++ ADSRYNR DKR+KLP W+ QFL + HLN+S D AV MA+ +L  MAQP++
Sbjct:    1 MRVEIDGLEVLFPYERMYAEQLQYMRELKRALDAHGHCMLEMPTGTGKTVSLLSLVLAYKFAHPTAGKLIYCTRTVPEMAKCVEELKNLVAYRKKYYGERAD-LTAVCLSSRRNMCVHPRVMAHADGEAVDGQCRKMTASWVRTKAVTHPGEVEVCSFYENYESRKSDETVLPAGIYNVDDLKELGVQKGWCPYFLTRYVVSFADVIVYNYQYMLDPKVSAMVSRSFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISSQVNRMKQADKARLDAEYRRLVEGLRSSDA---------------VVAPTYTNPNTQQHIDTSNDILMANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAISMETKPMKFCYTRLNSLMRTLEVTNLEEFNSLAAVADFATLVATYADGFMLIIEPYDGQ-SGVHDPVLQLACLDASLAIRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGTLLLEMAASCPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLQSKLLFIETTDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLIIFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVD 744          
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: A0A8K1FGF4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGF4_PYTOL)

HSP 1 Score: 987 bits (2552), Expect = 0.000e+0
Identity = 486/762 (63.78%), Postives = 600/762 (78.74%), Query Frame = 0
Query:    1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGG-GVELCEFFEGYATNGSDA-IMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMN 760
            MR ++DGL+V FPYE MY EQ  YM ELKR+LDA GHC+LEMPTGTGKTV L+SL+ +Y+ AHP  GKLIYCTRTVPEM KC++E+K ++AYRA++ G +  K+ A+CLSSRRN+C+H RV+  +D EAVD  CR MTASWVR +A  G    VELC ++E Y +  SD  ++P GIYS+DDLK+ G  KGWCPYFL R+++ +A+V+VYNYQYMLDPKV+ MVSR  E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L  IS++V  MK+ D+ARL+ EYRRLV GL  S                                    D + ANP LP D+L EA+PGNIRRAEHF++F+R+++E+ ++R+RV++VESETP AF+H L Q  A+E KP+KF Y+RLNSL+RTLE+T L+++  L DVADFATLV+TY+EGF ++IEP   V  G ++PV++LACLDASLA++PVFERF+SV+ITSGTLSP+DLYP+LL F PV+R +L MS  R CICPLV+TRGSDQ+ +STKFD RDD SVVRNYG LL+E AS  PDG+VCFF SY YME I+ +WD LGVLKRV++ KL+FIETKD+VETTLALDN+K+ACDCGRGAVF SVARGKVAEGIDFDRHYGR V++FG+PFQYTLSH LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLV+ ADSRYNR DKR+KLP W+ QFL + HLN+S D A+ MA+ +L  MAQP++
Sbjct:    1 MRVEIDGLEVLFPYERMYSEQLQYMRELKRALDANGHCMLEMPTGTGKTVSLLSLVLAYKHAHPTAGKLIYCTRTVPEMAKCVEEIKHLMAYRAKYYGDQ-HKLTAVCLSSRRNMCVHPRVMAHADGEAVDAQCRKMTASWVRARANTGEHQDVELCSYYENYESRKSDENVLPPGIYSVDDLKELGIGKGWCPYFLTRYVVTYADVIVYNYQYMLDPKVSAMVSRAFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAQVNKMKQADKARLDAEYRRLVEGLRSSSA---------------VVAPTYVNPANQQAIDTSNDILTANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAIAMETKPMKFCYTRLNSLMRTLEITNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDGV-SGAHDPVLQLACLDASLAMRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSCICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMASSCPDGMVCFFPSYLYMEKIIGQWDALGVLKRVVQHKLLFIETKDIVETTLALDNYKKACDCGRGAVFFSVARGKVAEGIDFDRHYGRCVILFGIPFQYTLSHKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVLFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAIFMAKKYLALMAQPVD 745          
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: H3G8C6_PHYRM (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8C6_PHYRM)

HSP 1 Score: 986 bits (2549), Expect = 0.000e+0
Identity = 486/765 (63.53%), Postives = 598/765 (78.17%), Query Frame = 0
Query:    1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA----EGGGGGVELCEFFEGY-ATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMN 760
            M+ D+DGL+V FPYE MY EQ  YM ELKR+LDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP  GKL+YCTRTVPEM KC++E+K+++AYR QHLG E  ++ A+CLSSRRN+C+H RV+  +D E VDG CR MTASWVR KA    E     VE C F+E Y A    D ++P G+YS+DDLK  G +KGWCPYFL R+++  A+V+VYNYQYMLDPKV+ +VSR  E ES++VFDEAHNIDNVC EALSVDLD+RSLD ASR L  +SS+V+ +K+ D+A+L+ EYRRLV GL  S                                    D + ANP LP D+L EA+PGNIRRAEHFV+F+R+++E+ + R+RV+ VESETP AF+H L Q  ++E KP+KF Y+RLNSLLRTLEVT L+++  L DVADFATLV+TY++GF ++IEP  S   GV++PV++L+CLDASLAI+PVFERF+SVVITSGTLSP+DLYP+LL F PV+R +L MS  R  ICPLV+TRGSDQ+ +STKFD RDD SVVRNYG LL+E A+  PDG+VCFF SY YME I+ +WD LGVLKRVL  KL+FIETKD+VETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLV+ ADSRYNR DKR+KLP W+ QFL + HLN+S D AV MA+ +L  MAQP++
Sbjct:    1 MKVDIDGLEVLFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKHAHPTAGKLVYCTRTVPEMAKCVEEIKKLVAYRQQHLG-ERAQLTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVRAKAAKAREEAAADVETCSFYEKYDARKSDDTVLPPGVYSVDDLKDLGVQKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIIVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVSKLKQADKAKLDAEYRRLVEGLRSSDA----------------------------VVAPTHDIMIANPVLPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAISMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLADVADFATLVATYADGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLTSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVD 735          
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: A0A5D6XMP7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMP7_9STRA)

HSP 1 Score: 977 bits (2526), Expect = 0.000e+0
Identity = 483/760 (63.55%), Postives = 597/760 (78.55%), Query Frame = 0
Query:    1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA-EGGGGGVELCEFFEGYATN-GSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQP 758
            MR D+DGL+V FPYE MY EQ  YM ELKR+LDA+GHC+LEMPTGTGKTV L+SL+ ++++AHP  GKL+YCTRTVPEM KC++ELKR++AYR ++ G E  ++ A+CLSSRRN+C+H RV+  +D EAVD  CR +TASWVR +A +     VE C F+E Y +  G +A++P G+Y++DDLK  G ++GWCPYFL R+ ++ A+V+VYNYQYMLDPKV+ MVSR  E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L  IS+ VA +K+ D ARL+ EYRRLV GL  S                                    D + ANP LP D+L EA+PGNIRRAEHF++F+R+++E+ ++R+RV++VESETP AF+H L Q  A++ KP+KF Y+RLNSLLRTLEVT L++F  L  VADFATLV+TY++GF ++IEP      GV++PV++LACLDASLAI+PVFERFASVVITSGTLSP+DLYP+LL F PVVR +L MS  R CICP+V+TRGSDQ+ +STKFD RDD SVVRNYG+LL+E A+  PDG+VCFF SY YM  I+ +WD LGVLKRVL+ KL+FIET DVVETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLV+ ADSRYNR DKR+KLP W+ QFL + HLN+S D AV MA+ +L  MAQP
Sbjct:    1 MRVDIDGLEVLFPYERMYAEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAFKYAHPTAGKLVYCTRTVPEMAKCVEELKRLVAYREKYYG-ERARLTAVCLSSRRNMCVHPRVMAHADGEAVDSQCRQLTASWVRARAAQQPESSVETCSFYEKYESRKGDEAVLPPGVYAVDDLKALGAQRGWCPYFLTRYAVSFADVIVYNYQYMLDPKVSAMVSRTFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAHVARVKQADTARLDAEYRRLVEGLRSSDA----------------VVAPTYMGAADRPIDTANDLLLANPVLPDDVLAEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLHQAIAMDAKPMKFCYTRLNSLLRTLEVTNLEEFNSLTAVADFATLVATYADGFMLIIEPFDGT-SGVHDPVLQLACLDASLAIRPVFERFASVVITSGTLSPIDLYPRLLNFSPVVRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGSLLLELAASCPDGMVCFFPSYLYMAKIIGQWDALGVLKRVLQSKLLFIETTDVVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLALMAQP 742          
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: B8C2D9_THAPS (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2D9_THAPS)

HSP 1 Score: 974 bits (2518), Expect = 0.000e+0
Identity = 485/787 (61.63%), Postives = 613/787 (77.89%), Query Frame = 0
Query:    1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGG-----GGGVELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQS-----VESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEG---FAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMNPLRLKGTMLDMRKV 774
            MRF+L+GLDVFFPY+ +Y EQY YM  LK++LDA GHCLLEMPTGTGKTVCL+SLITSYQ A+P  GKL+YCTRTVPEM   ++EL  V+AYR++ LG  G  VLALCLSSRRN+CIHERV+ ESDRE +D ACR MTA W  +KA+          VE CE+++G+ + G    MP+G+Y L++L+++G+ K WCPY+L R  INHA+VLV+NYQYMLDPKVA MVS+ELE+ES++VFDEAHNID+VC EALSVD+ +R+L+ A+R LG++SS+V+ +K +D ARL  EY+ LV+GL + GL  +                                   ++  L  D++ EAVPGNIRRAEHF++F++K+VEH K+R+R  S     V SETPLAF+HR+   T+LE KPLKF YSRL+SLLRTL+V  LDDF  L DVADFA+LV+TY+EG   FA+++EP GS +PG  +PV++LACLDASLAI P+F+RF SVVITSGTLSP+DLYPKLL F+P V  + +MST R CI PLV+TRGSDQL +STKFD RDD  VVRNYG++L+E  S +PDG+V FFTSYSYME I+S+WD +G+L+++ + KL+FIETKDVVETTLALDN++RACD GRGAVFLSVARGKV+EGI+FDRHYGRAV+MFGVPFQYTLSH+LRARLEYL+  +QIRE DFL FDA+RQ +QC+GRVIRSK DYGL++ ADSRYNRHDKRSKLP W+LQFL +G LN+S+DTA+A  + FL+ MAQP++   LK  +L + +V
Sbjct:    1 MRFNLEGLDVFFPYDRIYLEQYQYMRALKQTLDAGGHCLLEMPTGTGKTVCLLSLITSYQLANPNCGKLVYCTRTVPEMNSVMEELGTVLAYRSEQLGA-GSGVLALCLSSRRNMCIHERVLRESDREGIDAACRSMTAPWAIEKAQKARQQQSAQVVETCEYYDGFQSAGEATSMPSGVYDLEELRKWGKNKNWCPYYLTRQAINHASVLVFNYQYMLDPKVAKMVSKELESESIIVFDEAHNIDSVCIEALSVDIHERNLEQATRSLGRLSSEVSRIKASDGARLQAEYQNLVNGLVDQGLLDAPAAAVGL----------------------------SSNVLSPDVINEAVPGNIRRAEHFIAFMKKIVEHLKTRLRAVSGPRGGVISETPLAFLHRMITTTSLEAKPLKFAYSRLSSLLRTLQVPNLDDFNALTDVADFASLVATYAEGLPRFAIIMEPNGSSIPGALDPVIQLACLDASLAIAPLFKRFGSVVITSGTLSPIDLYPKLLQFEPCVSESFNMSTFRPCIRPLVITRGSDQLPVSTKFDDRDDMGVVRNYGSMLVELCSSIPDGVVAFFTSYSYMESIISEWDGMGILRQLTKSKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHILRARLEYLQTHYQIREQDFLNFDALRQASQCVGRVIRSKIDYGLMIFADSRYNRHDKRSKLPKWILQFLGDGQLNLSTDTAIAQVKHFLRVMAQPVDQNALKEVLLTLDEV 758          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDN2_ECTSI0.000e+090.93General transcription and DNA repair factor IIH he... [more]
A0A836CJZ4_9STRA0.000e+071.39General transcription and DNA repair factor IIH he... [more]
K8YZX4_NANGC0.000e+064.81General transcription and DNA repair factor IIH he... [more]
A0A7S2D9H7_9STRA0.000e+067.28General transcription and DNA repair factor IIH he... [more]
A0A7R9U4D1_9STRA0.000e+062.97General transcription and DNA repair factor IIH he... [more]
K3WFP6_GLOUD0.000e+063.73General transcription and DNA repair factor IIH he... [more]
A0A8K1FGF4_PYTOL0.000e+063.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3G8C6_PHYRM0.000e+063.53General transcription and DNA repair factor IIH he... [more]
A0A5D6XMP7_9STRA0.000e+063.55General transcription and DNA repair factor IIH he... [more]
B8C2D9_THAPS0.000e+061.63General transcription and DNA repair factor IIH he... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001945RAD3/XPD familyPRINTSPR00852XRODRMPGMNTDcoord: 523..540
score: 53.17
coord: 403..425
score: 54.04
coord: 738..758
score: 47.62
coord: 8..25
score: 63.49
coord: 667..689
score: 77.02
coord: 364..385
score: 48.05
coord: 434..452
score: 66.92
IPR001945RAD3/XPD familyPANTHERPTHR11472:SF1GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPDcoord: 1..774
IPR006554Helicase-like, DEXD box c2 typeSMARTSM00488deadxpdcoord: 8..281
e-value: 1.3E-109
score: 380.1
IPR006555ATP-dependent helicase, C-terminalSMARTSM00491Cxpdneu3coord: 573..717
e-value: 2.4E-67
score: 239.7
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 555..728
e-value: 2.0E-43
score: 148.5
NoneNo IPR availableGENE3D1.10.275.30coord: 388..467
e-value: 5.5E-7
score: 31.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 774..825
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 774..788
NoneNo IPR availableCDDcd18788SF2_C_XPDcoord: 520..715
e-value: 3.39359E-66
score: 215.546
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 468..505
e-value: 5.5E-7
score: 31.0
coord: 17..288
e-value: 1.2E-50
score: 174.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 531..731
e-value: 5.8E-52
score: 177.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 32..710
IPR010643Helical and beta-bridge domainPFAMPF06777HBBcoord: 331..444
e-value: 1.1E-23
score: 83.9
IPR010614DEAD2PFAMPF06733DEAD_2coord: 71..257
e-value: 1.4E-49
score: 168.1
IPR013020ATP-dependent helicase Rad3/Chl1-likeTIGRFAMTIGR00604TIGR00604coord: 333..739
e-value: 8.7E-145
score: 482.0
coord: 9..299
e-value: 1.7E-86
score: 289.3
IPR045028Helicase superfamily 1/2, DinG/Rad3-likePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 1..774
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 230..239
IPR014013Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 7..291
score: 34.64473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig859contigA-nodosum_M_contig859:180880..192407 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig859.5.1mRNA_A-nodosum_M_contig859.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig859 180619..192963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig859.5.1 ID=prot_A-nodosum_M_contig859.5.1|Name=mRNA_A-nodosum_M_contig859.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=826bp
MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTV
CLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPE
GEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGG
GGVELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHII
NHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSV
DLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGR
SSGGVGGTSTAGGGTAGGGSGTAGAVAVSAAADAIPANPALPADILQEAV
PGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALER
KPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIE
PTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPK
LLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRN
YGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFI
ETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVM
MFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIR
SKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARM
FLKDMAQPMNPLRLKGTMLDMRKVADRNRDKTGKEQRDPSEIVNAGAFVS
APRGGGGSSGTVGNGRRRIDHMQIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001945RAD3/XPD
IPR006554Helicase-like_DEXD_c2
IPR006555ATP-dep_Helicase_C
IPR027417P-loop_NTPase
IPR010643HBB
IPR010614DEAD_2
IPR013020Rad3/Chl1-like
IPR045028DinG/Rad3-like
IPR002464DNA/RNA_helicase_DEAH_CS
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3