prot_A-nodosum_M_contig859.5.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: D8LDN2_ECTSI (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN2_ECTSI) HSP 1 Score: 1400 bits (3623), Expect = 0.000e+0 Identity = 732/805 (90.93%), Postives = 760/805 (94.41%), Query Frame = 0
Query: 1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGGGVELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------DAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMNPLRLKGTMLDMRKVADRNRDKTGKEQRDPSEI 792
MR DLDGLDVFFPY+FMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCI+ELKRVI YR LGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAE GGGG ELCEFFEGY+ NGSDA MPNGIYSLDDLK+FG+EKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVA+MKRTDQARLN EY+RLVSGLA+SGLGR+S XXXXXXXXXXXXXXXXXXXXX DAIPANPALPADILQEAVPGNIRRAEHFVSF+RKVVEHFK+RVRVQSVESETPLAFVHR+QQVTALERKPLKF YSRLNSLLRTLEVTGLDDFRPLVDVADFATLV TY+EGFAVVIEPTGSVVPGVYEPVMRLACLDASLAI+PVFERFASVVITSGTLSPLDLYPKLLGF PVVRTALSMSTVRKCICPLVVTRGSDQL MSTKFDQRDDPSVVRNYGAL+IE A+IVPDG+VCFFTSYSYME IVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGA+FLSVARGKVAEGIDFDRHYGRAV+MFGVPFQYTLSHVLRARLEYLR+TFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLV+LADSRYNRHDKRSKLPGWVLQFL E HLNMS+D A AMARMFLKDMAQP++PLRLKGTMLD +KVA RNR+KTGKEQR+ SE+
Sbjct: 1 MRLDLDGLDVFFPYDFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGG-ELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVAAAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFVHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASVVITSGTLSPLDLYPKLLGFSPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALMIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAIFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRSTFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLDETHLNMSADNAAAMARMFLKDMAQPLDPLRLKGTMLDTKKVAARNREKTGKEQRNASEL 804
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: A0A836CJZ4_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ4_9STRA) HSP 1 Score: 1160 bits (3002), Expect = 0.000e+0 Identity = 579/811 (71.39%), Postives = 668/811 (82.37%), Query Frame = 0
Query: 1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA-----EGGGGG--------------------------------VELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMNPLRLKGTMLDMRKV 774
M F L + V+FPY++ YPEQY YM ELK +LDAKGHCLLEMPTGTGKTVCLI+LIT+YQ+ HPEVGKLIYCTRTVPEM+KC++E+KRVI YR + LGP G KVLALCLSSRRNLCIH+RV+E++DREAVDGACRDMTASWVR++A +GG G +ELC+F+E Y NGSD++MP+GIYS++DLK FGREKGWCPYFLARH+INHAN+LVYNYQYMLDPKVAG+VSRELEAESVVVFDEAHNIDNVCTEALSV L++ +L+AASRCLG++SSKV DMK+ DQ RLNEEY+RLV+GLA++ G + + ANPALPAD+L EAVPGNIRRAEHFVSFLRK++EH K R+R +VESETPLAF+HRLQQ T +ERKPL+FTYSRLNSLLRTLEVT LDDFRPL VADFATLV+TY EGFA+VIEP GSV+PGVYEPV++LACLDASLAIKPVFERF SVVITSGTLSP+DLYPKLL F PVVR++L MST R+CICPLVVTRGSDQL++STKFD R+DPSVVRNYG+L+IE A+ +PDGIVCFFTSYSYME IV++W E GVL +V EKKLIF+ETKDVVETTLALDNFKRACD GRGA+F SVARGKVAEGIDFDRHYGR V+MFGVPFQYTLSHVLRARLEYLRATFQIRE DFL FDA+RQ AQC+GRVIRSKTDYGL+VLADSRYNRHDKRSKLP W+ QFL+E HLN+S+D A+++ RMFLK+MAQP++ +LK + D KV
Sbjct: 1 MIFTLGDITVWFPYDYCYPEQYAYMSELKTTLDAKGHCLLEMPTGTGKTVCLIALITAYQYQHPEVGKLIYCTRTVPEMVKCVEEIKRVIRYREEQLGPAGSKVLALCLSSRRNLCIHQRVLEDADREAVDGACRDMTASWVRQRAGVKRDKGGARGANGXXXXXXXXXXXXXXXXXXXXAQGGEVDASIELCQFYEEYDANGSDSVMPSGIYSIEDLKDFGREKGWCPYFLARHVINHANILVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVQLNRHNLEAASRCLGRVSSKVTDMKQHDQRRLNEEYQRLVNGLADNAAG----------------------PLPAGVQGIADNNMLANPALPADVLAEAVPGNIRRAEHFVSFLRKLIEHLKVRIRATNVESETPLAFLHRLQQNTTIERKPLRFTYSRLNSLLRTLEVTNLDDFRPLSAVADFATLVATYQEGFAIVIEPEGSVIPGVYEPVLQLACLDASLAIKPVFERFGSVVITSGTLSPIDLYPKLLNFHPVVRSSLPMSTFRRCICPLVVTRGSDQLAISTKFDLREDPSVVRNYGSLIIELAAAIPDGIVCFFTSYSYMERIVAQWQESGVLSKVYEKKLIFLETKDVVETTLALDNFKRACDSGRGAIFFSVARGKVAEGIDFDRHYGRCVVMFGVPFQYTLSHVLRARLEYLRATFQIREADFLNFDALRQAAQCVGRVIRSKTDYGLMVLADSRYNRHDKRSKLPPWITQFLTESHLNLSTDMAISLTRMFLKEMAQPIDRDQLKTILCDAHKV 789
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: K8YZX4_NANGC (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZX4_NANGC) HSP 1 Score: 1068 bits (2762), Expect = 0.000e+0 Identity = 536/827 (64.81%), Postives = 658/827 (79.56%), Query Frame = 0
Query: 1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGGGVELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESG-LGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPA--LPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMNPLRLKGTMLDMRKVAD----RNRDKTGKEQRDPSEIVNAGAFVSAPRGGGGSSGTVGNGRRRID 820
+RFDLDGLD+FFPY+ +Y EQY+YMLELKR+LDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEM+KC++E+++VI YR + +G EG KVLA+CLSSRRNLCIHERV+EESDREAVD ACR MTASWVR++ VELC+++E Y NG+DA + +GIYSLDDLK+ G+++GWCPYFLARHIINHAN+L+YNYQY+LDPKVAG+VS+ELEAES+VVFDEAHNIDNVC EALSV+LD+RSLD A+RCLGK+S++V+ MK+ D +LNEEY+RLV GLAESG LG ++ DA+ ANP LP + QEAVPGNIRRAEHF++F++KVVEH K+ +RV S + ++PLAF+H LQ TALE KPL+FTYSRLNSLLRTLEVT LD+F PL DVADFATLV+TY+EGF V+ EP GS +PG+ +PV++L+CLDASLAIKPVFERF SV+ITSGTLSPLDLYP LL F PVVR ++ MS RK ICPLVVT+GS Q ++T+F++RDDPSV R+YG LL+E A+ VPDG+VCFFTSYSYME +V +W++ G+L+++LE+KLIFIETKDVVETTLALDNF+RACD GRGA+FLSVARGKVAEGIDFDRHYGRAV++ GVPFQYTLS V+R RLEYL+ F I DFLTFDA+RQ AQC+GRVIRSK DYGL++ ADSRYNR+DKR+KLP W+L + HL++S+ A+ R FLK+MAQPM+ L+ +LD ++A+ R G + R+ + + P G +G GR +D
Sbjct: 2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSAN-VELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPA---------------------DAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGXXXXGRGSVD 806
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: A0A7S2D9H7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D9H7_9STRA) HSP 1 Score: 1035 bits (2675), Expect = 0.000e+0 Identity = 514/764 (67.28%), Postives = 612/764 (80.10%), Query Frame = 0
Query: 3 FDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEG--EKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGGGVELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRV----RVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMN 760
F L+G+DV+FPY+ MYPEQY YMLE+K +LDAKGH LLEMPTGTGKT C++SL+ SYQ AHPE+GKLIYCTRTVPEM KCI ELKRV+ H+G G +LALCLSSRRN+CIHE V+E +DREAVD CRDMTASWVR+KA+ G VE C+F+E Y GSDA +PNGI+SLDDLK GREKGWCPYFLARH+INHA VLVYNYQYMLDPKVAGMVSRELE+ESVV+FDEAHNIDNVC EALSV LD+RS+ AA + L IS+KV ++K D +RL +EYRRLV+GL + G++ D I ANP+LPAD+L EAVPGNIRRAEHFVSFLR ++ H + R+ +VE+ETPLAFVHRL T E KPLKF YSRLNSLLRTLEVT LD + PL DV D TLV+TYS+GFA+VIEP GS++PGVYEP ++LACLDAS+AIKPVFERF+SV+ITSGTLSPLDLYP+LL FQPV+R +L MS R ICPLV+T+GSDQ +ST+F+ RD+P VVRNYGALL++ AS +PDGIV FFTSY YME IV +WD L V +R+LEKKL+FIETKDVVETT+AL+N+KRAC+CGRGAVFLSVARGKVAEGIDFD+HYGR VM+ GVP+QYTLSH+LRARLEYLR TFQIRE DFLTFDA+RQ AQC+GRV+RSK DYG++V ADSRYNR+DKRSKLP W+ QFL HL++S+D A+ + + F+++M QP++
Sbjct: 44 FKLEGMDVYFPYKKMYPEQYKYMLEMKHALDAKGHGLLEMPTGTGKTACVLSLVVSYQLAHPEMGKLIYCTRTVPEMSKCIGELKRVVQNILAHVGQAGAASSLLALCLSSRRNMCIHETVMEAADREAVDSLCRDMTASWVRQKAQASPGSVETCDFYEEYDKAGSDAAIPNGIFSLDDLKVLGREKGWCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGLNDGAGGQT-------------------------------DTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLVATYSKGFAIVIEPNGSIIPGVYEPTLQLACLDASIAIKPVFERFSSVIITSGTLSPLDLYPRLLNFQPVIRVSLDMSVFRTPICPLVITQGSDQAQISTRFEVRDEPGVVRNYGALLLDLASTIPDGIVVFFTSYMYMEKIVFEWDRLQVFERLLEKKLVFIETKDVVETTMALENYKRACNCGRGAVFLSVARGKVAEGIDFDQHYGRCVMLIGVPYQYTLSHILRARLEYLRTTFQIREADFLTFDALRQAAQCVGRVMRSKKDYGVMVFADSRYNRYDKRSKLPPWIQQFLKASHLSLSTDMALDIIKGFMREMGQPID 776
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: A0A7R9U4D1_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4D1_9STRA) HSP 1 Score: 994 bits (2569), Expect = 0.000e+0 Identity = 488/775 (62.97%), Postives = 601/775 (77.55%), Query Frame = 0
Query: 1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGGGVELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMNPLRLKGTMLDMRKVA 775
MRF L+ +DVFFPY +Y EQ+DYM+ELKR+L+A GH LEMPTGTGKTVCL+SLITS QFA PE+GK IYCTRTVPEM+KC++ELKRV+ YRA+ +G EG K+LALCLSSRRN+CIH+RV+EESDREAVD ACR MTASWVRK+A+ G VELCEF+E Y NG+D +P GIYSL+DL+ GRE+GWCPYFLARH++ HANVL+YNYQYMLDPKVAG+VS ELE +SVVVFDEAHNIDNVC EA+SV + + LDA++R LG ++SKV +MK +D RLN EY+RLVSGLA SG S D+I +NP+LPADIL E+VPGNIR+AEHF++F+RK+V H K ++R + ETP AF+H+L ++T LE KP+KFTYSRLNSLLRTLEVT LDD L ++ADFATL++TY EGFAVV+EP S++PG+ EPV+ L+CLDASLAIKPVF+RF SV+ITSGTLSP+DLYP++L F PVV ++L MS R ICPL+VTRG + MS+ F R+D V+ NYG LL++ IVPDG+V FF SY +ME + KWDELG+L++V KL+FIETKDVVETTLALDNF+RAC+CGRG VFLSVARGKVAEGIDFDRH GRAV+MFGVPFQYT S L+ARL++L FQI E DF+TFDA+RQ +QC GRV RSKTDYGL++ ADSRYN+ KR KLP W+ QFL + H N+S + R FL++MAQP++ +LD K++
Sbjct: 45 MRFRLEDVDVFFPYPSVYREQFDYMVELKRALEAPGHAALEMPTGTGKTVCLMSLITSVQFARPEMGKFIYCTRTVPEMVKCVEELKRVVNYRAECVGAEGRKILALCLSSRRNMCIHDRVLEESDREAVDAACRSMTASWVRKRAQEGAS-VELCEFYEQYDANGTDTAIPYGIYSLEDLRDLGRERGWCPYFLARHVLKHANVLIYNYQYMLDPKVAGLVSSELEEDSVVVFDEAHNIDNVCIEAMSVQISRPILDASTRSLGALASKVEEMKASDVERLNAEYQRLVSGLAMSGPAPGSYTVAT-------------------------DSILSNPSLPADILAESVPGNIRKAEHFLTFMRKIVRHLKDQLRNPEAKWETPQAFLHQLHEMTGLEAKPMKFTYSRLNSLLRTLEVTSLDDHSDLAEIADFATLLATYQEGFAVVLEPDSSIIPGLTEPVLELSCLDASLAIKPVFKRFKSVIITSGTLSPIDLYPRILDFSPVVSSSLPMSIFRSSICPLIVTRGDNMTKMSSAFGVRNDDRVISNYGKLLVDTCRIVPDGVVVFFPSYLFMEGTIVKWDELGILRQVSNYKLLFIETKDVVETTLALDNFRRACECGRGGVFLSVARGKVAEGIDFDRHLGRAVLMFGVPFQYTKSLTLKARLDFLHTRFQINEADFITFDAMRQASQCAGRVFRSKTDYGLMIFADSRYNQESKRQKLPPWIRQFLGDAHCNLSITQTASKMRRFLREMAQPVDDEARSSVLLDSSKIS 793
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: K3WFP6_GLOUD (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFP6_GLOUD) HSP 1 Score: 989 bits (2557), Expect = 0.000e+0 Identity = 485/761 (63.73%), Postives = 600/761 (78.84%), Query Frame = 0
Query: 1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGGGVELCEFFEGYATNGSD-AIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMN 760
MR ++DGL+V FPYE MY EQ YM ELKR+LDA GHC+LEMPTGTGKTV L+SL+ +Y+FAHP GKLIYCTRTVPEM KC++ELK ++AYR ++ G + + A+CLSSRRN+C+H RV+ +D EAVDG CR MTASWVR KA G VE+C F+E Y + SD ++P GIY++DDLK+ G +KGWCPYFL R++++ A+V+VYNYQYMLDPKV+ MVSR E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L ISS+V MK+ D+ARL+ EYRRLV GL S D + ANP LP D+L EA+PGNIRRAEHF++F+R+++E+ ++R+RV++VESETP AF+H L Q ++E KP+KF Y+RLNSL+RTLEVT L++F L VADFATLV+TY++GF ++IEP GV++PV++LACLDASLAI+PVFERF+SV+ITSGTLSP+DLYP+LL F PV+R +L MS R CICP+V+TRGSDQ+ +STKFD RDD SVVRNYG LL+E A+ PDG+VCFF SY YME I+ +WD LGVLKRVL+ KL+FIET D+VETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGL++ ADSRYNR DKR+KLP W+ QFL + HLN+S D AV MA+ +L MAQP++
Sbjct: 1 MRVEIDGLEVLFPYERMYAEQLQYMRELKRALDAHGHCMLEMPTGTGKTVSLLSLVLAYKFAHPTAGKLIYCTRTVPEMAKCVEELKNLVAYRKKYYGERAD-LTAVCLSSRRNMCVHPRVMAHADGEAVDGQCRKMTASWVRTKAVTHPGEVEVCSFYENYESRKSDETVLPAGIYNVDDLKELGVQKGWCPYFLTRYVVSFADVIVYNYQYMLDPKVSAMVSRSFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISSQVNRMKQADKARLDAEYRRLVEGLRSSDA---------------VVAPTYTNPNTQQHIDTSNDILMANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAISMETKPMKFCYTRLNSLMRTLEVTNLEEFNSLAAVADFATLVATYADGFMLIIEPYDGQ-SGVHDPVLQLACLDASLAIRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGTLLLEMAASCPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLQSKLLFIETTDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLIIFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVD 744
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: A0A8K1FGF4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGF4_PYTOL) HSP 1 Score: 987 bits (2552), Expect = 0.000e+0 Identity = 486/762 (63.78%), Postives = 600/762 (78.74%), Query Frame = 0
Query: 1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGGGG-GVELCEFFEGYATNGSDA-IMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMN 760
MR ++DGL+V FPYE MY EQ YM ELKR+LDA GHC+LEMPTGTGKTV L+SL+ +Y+ AHP GKLIYCTRTVPEM KC++E+K ++AYRA++ G + K+ A+CLSSRRN+C+H RV+ +D EAVD CR MTASWVR +A G VELC ++E Y + SD ++P GIYS+DDLK+ G KGWCPYFL R+++ +A+V+VYNYQYMLDPKV+ MVSR E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L IS++V MK+ D+ARL+ EYRRLV GL S D + ANP LP D+L EA+PGNIRRAEHF++F+R+++E+ ++R+RV++VESETP AF+H L Q A+E KP+KF Y+RLNSL+RTLE+T L+++ L DVADFATLV+TY+EGF ++IEP V G ++PV++LACLDASLA++PVFERF+SV+ITSGTLSP+DLYP+LL F PV+R +L MS R CICPLV+TRGSDQ+ +STKFD RDD SVVRNYG LL+E AS PDG+VCFF SY YME I+ +WD LGVLKRV++ KL+FIETKD+VETTLALDN+K+ACDCGRGAVF SVARGKVAEGIDFDRHYGR V++FG+PFQYTLSH LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLV+ ADSRYNR DKR+KLP W+ QFL + HLN+S D A+ MA+ +L MAQP++
Sbjct: 1 MRVEIDGLEVLFPYERMYSEQLQYMRELKRALDANGHCMLEMPTGTGKTVSLLSLVLAYKHAHPTAGKLIYCTRTVPEMAKCVEEIKHLMAYRAKYYGDQ-HKLTAVCLSSRRNMCVHPRVMAHADGEAVDAQCRKMTASWVRARANTGEHQDVELCSYYENYESRKSDENVLPPGIYSVDDLKELGIGKGWCPYFLTRYVVTYADVIVYNYQYMLDPKVSAMVSRAFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAQVNKMKQADKARLDAEYRRLVEGLRSSSA---------------VVAPTYVNPANQQAIDTSNDILTANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAIAMETKPMKFCYTRLNSLMRTLEITNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDGV-SGAHDPVLQLACLDASLAMRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSCICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMASSCPDGMVCFFPSYLYMEKIIGQWDALGVLKRVVQHKLLFIETKDIVETTLALDNYKKACDCGRGAVFFSVARGKVAEGIDFDRHYGRCVILFGIPFQYTLSHKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVLFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAIFMAKKYLALMAQPVD 745
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: H3G8C6_PHYRM (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8C6_PHYRM) HSP 1 Score: 986 bits (2549), Expect = 0.000e+0 Identity = 486/765 (63.53%), Postives = 598/765 (78.17%), Query Frame = 0
Query: 1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA----EGGGGGVELCEFFEGY-ATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMN 760
M+ D+DGL+V FPYE MY EQ YM ELKR+LDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP GKL+YCTRTVPEM KC++E+K+++AYR QHLG E ++ A+CLSSRRN+C+H RV+ +D E VDG CR MTASWVR KA E VE C F+E Y A D ++P G+YS+DDLK G +KGWCPYFL R+++ A+V+VYNYQYMLDPKV+ +VSR E ES++VFDEAHNIDNVC EALSVDLD+RSLD ASR L +SS+V+ +K+ D+A+L+ EYRRLV GL S D + ANP LP D+L EA+PGNIRRAEHFV+F+R+++E+ + R+RV+ VESETP AF+H L Q ++E KP+KF Y+RLNSLLRTLEVT L+++ L DVADFATLV+TY++GF ++IEP S GV++PV++L+CLDASLAI+PVFERF+SVVITSGTLSP+DLYP+LL F PV+R +L MS R ICPLV+TRGSDQ+ +STKFD RDD SVVRNYG LL+E A+ PDG+VCFF SY YME I+ +WD LGVLKRVL KL+FIETKD+VETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLV+ ADSRYNR DKR+KLP W+ QFL + HLN+S D AV MA+ +L MAQP++
Sbjct: 1 MKVDIDGLEVLFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKHAHPTAGKLVYCTRTVPEMAKCVEEIKKLVAYRQQHLG-ERAQLTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVRAKAAKAREEAAADVETCSFYEKYDARKSDDTVLPPGVYSVDDLKDLGVQKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIIVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVSKLKQADKAKLDAEYRRLVEGLRSSDA----------------------------VVAPTHDIMIANPVLPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAISMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLADVADFATLVATYADGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLTSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVD 735
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: A0A5D6XMP7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMP7_9STRA) HSP 1 Score: 977 bits (2526), Expect = 0.000e+0 Identity = 483/760 (63.55%), Postives = 597/760 (78.55%), Query Frame = 0
Query: 1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA-EGGGGGVELCEFFEGYATN-GSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQSVESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQP 758
MR D+DGL+V FPYE MY EQ YM ELKR+LDA+GHC+LEMPTGTGKTV L+SL+ ++++AHP GKL+YCTRTVPEM KC++ELKR++AYR ++ G E ++ A+CLSSRRN+C+H RV+ +D EAVD CR +TASWVR +A + VE C F+E Y + G +A++P G+Y++DDLK G ++GWCPYFL R+ ++ A+V+VYNYQYMLDPKV+ MVSR E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L IS+ VA +K+ D ARL+ EYRRLV GL S D + ANP LP D+L EA+PGNIRRAEHF++F+R+++E+ ++R+RV++VESETP AF+H L Q A++ KP+KF Y+RLNSLLRTLEVT L++F L VADFATLV+TY++GF ++IEP GV++PV++LACLDASLAI+PVFERFASVVITSGTLSP+DLYP+LL F PVVR +L MS R CICP+V+TRGSDQ+ +STKFD RDD SVVRNYG+LL+E A+ PDG+VCFF SY YM I+ +WD LGVLKRVL+ KL+FIET DVVETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLV+ ADSRYNR DKR+KLP W+ QFL + HLN+S D AV MA+ +L MAQP
Sbjct: 1 MRVDIDGLEVLFPYERMYAEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAFKYAHPTAGKLVYCTRTVPEMAKCVEELKRLVAYREKYYG-ERARLTAVCLSSRRNMCVHPRVMAHADGEAVDSQCRQLTASWVRARAAQQPESSVETCSFYEKYESRKGDEAVLPPGVYAVDDLKALGAQRGWCPYFLTRYAVSFADVIVYNYQYMLDPKVSAMVSRTFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAHVARVKQADTARLDAEYRRLVEGLRSSDA----------------VVAPTYMGAADRPIDTANDLLLANPVLPDDVLAEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLHQAIAMDAKPMKFCYTRLNSLLRTLEVTNLEEFNSLTAVADFATLVATYADGFMLIIEPFDGT-SGVHDPVLQLACLDASLAIRPVFERFASVVITSGTLSPIDLYPRLLNFSPVVRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGSLLLELAASCPDGMVCFFPSYLYMAKIIGQWDALGVLKRVLQSKLLFIETTDVVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLALMAQP 742
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Match: B8C2D9_THAPS (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2D9_THAPS) HSP 1 Score: 974 bits (2518), Expect = 0.000e+0 Identity = 485/787 (61.63%), Postives = 613/787 (77.89%), Query Frame = 0
Query: 1 MRFDLDGLDVFFPYEFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIQELKRVIAYRAQHLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEGG-----GGGVELCEFFEGYATNGSDAIMPNGIYSLDDLKQFGREKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVADMKRTDQARLNEEYRRLVSGLAESGLGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIPANPALPADILQEAVPGNIRRAEHFVSFLRKVVEHFKSRVRVQS-----VESETPLAFVHRLQQVTALERKPLKFTYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVSTYSEG---FAVVIEPTGSVVPGVYEPVMRLACLDASLAIKPVFERFASVVITSGTLSPLDLYPKLLGFQPVVRTALSMSTVRKCICPLVVTRGSDQLSMSTKFDQRDDPSVVRNYGALLIEFASIVPDGIVCFFTSYSYMEHIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVMMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVVLADSRYNRHDKRSKLPGWVLQFLSEGHLNMSSDTAVAMARMFLKDMAQPMNPLRLKGTMLDMRKV 774
MRF+L+GLDVFFPY+ +Y EQY YM LK++LDA GHCLLEMPTGTGKTVCL+SLITSYQ A+P GKL+YCTRTVPEM ++EL V+AYR++ LG G VLALCLSSRRN+CIHERV+ ESDRE +D ACR MTA W +KA+ VE CE+++G+ + G MP+G+Y L++L+++G+ K WCPY+L R INHA+VLV+NYQYMLDPKVA MVS+ELE+ES++VFDEAHNID+VC EALSVD+ +R+L+ A+R LG++SS+V+ +K +D ARL EY+ LV+GL + GL + ++ L D++ EAVPGNIRRAEHF++F++K+VEH K+R+R S V SETPLAF+HR+ T+LE KPLKF YSRL+SLLRTL+V LDDF L DVADFA+LV+TY+EG FA+++EP GS +PG +PV++LACLDASLAI P+F+RF SVVITSGTLSP+DLYPKLL F+P V + +MST R CI PLV+TRGSDQL +STKFD RDD VVRNYG++L+E S +PDG+V FFTSYSYME I+S+WD +G+L+++ + KL+FIETKDVVETTLALDN++RACD GRGAVFLSVARGKV+EGI+FDRHYGRAV+MFGVPFQYTLSH+LRARLEYL+ +QIRE DFL FDA+RQ +QC+GRVIRSK DYGL++ ADSRYNRHDKRSKLP W+LQFL +G LN+S+DTA+A + FL+ MAQP++ LK +L + +V
Sbjct: 1 MRFNLEGLDVFFPYDRIYLEQYQYMRALKQTLDAGGHCLLEMPTGTGKTVCLLSLITSYQLANPNCGKLVYCTRTVPEMNSVMEELGTVLAYRSEQLGA-GSGVLALCLSSRRNMCIHERVLRESDREGIDAACRSMTAPWAIEKAQKARQQQSAQVVETCEYYDGFQSAGEATSMPSGVYDLEELRKWGKNKNWCPYYLTRQAINHASVLVFNYQYMLDPKVAKMVSKELESESIIVFDEAHNIDSVCIEALSVDIHERNLEQATRSLGRLSSEVSRIKASDGARLQAEYQNLVNGLVDQGLLDAPAAAVGL----------------------------SSNVLSPDVINEAVPGNIRRAEHFIAFMKKIVEHLKTRLRAVSGPRGGVISETPLAFLHRMITTTSLEAKPLKFAYSRLSSLLRTLQVPNLDDFNALTDVADFASLVATYAEGLPRFAIIMEPNGSSIPGALDPVIQLACLDASLAIAPLFKRFGSVVITSGTLSPIDLYPKLLQFEPCVSESFNMSTFRPCIRPLVITRGSDQLPVSTKFDDRDDMGVVRNYGSMLVELCSSIPDGVVAFFTSYSYMESIISEWDGMGILRQLTKSKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHILRARLEYLQTHYQIREQDFLNFDALRQASQCVGRVIRSKIDYGLMIFADSRYNRHDKRSKLPKWILQFLGDGQLNLSTDTAIAQVKHFLRVMAQPVDQNALKEVLLTLDEV 758 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig859.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig859.5.1 ID=prot_A-nodosum_M_contig859.5.1|Name=mRNA_A-nodosum_M_contig859.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=826bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|