prot_A-nodosum_M_contig8566.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8566.1.1
Unique Nameprot_A-nodosum_M_contig8566.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length133
Homology
BLAST of mRNA_A-nodosum_M_contig8566.1.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 3.400e-20
Identity = 54/143 (37.76%), Postives = 83/143 (58.04%), Query Frame = 0
Query:    1 MAVDGKHGVGR-AAEVIDVYQEMGCDIIGLQETRRSGQSILLQAGYVVYYSCESGGDEERKKGQGGVGLTVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVAFVVGYAPTDTQ------SVGKNNASWTILERVVKE 133
            +A  G++ +G     V+ +    GCD+IGLQETRR GQ  +   GYV+ +S    G ++++ G  GVG+ ++++I  +   E R  E IS RL+KV L++ GR   V FVVGYAPT+T        V   ++ WT L+  ++E
Sbjct:   19 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGGH-GVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIRE 159          
BLAST of mRNA_A-nodosum_M_contig8566.1.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.270e-19
Identity = 54/143 (37.76%), Postives = 84/143 (58.74%), Query Frame = 0
Query:    1 MAVDGKHGVGR-AAEVIDVYQEMGCDIIGLQETRRSGQSILLQAGYVVYYSCESGGDEERKKGQGGVGLTVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVAFVVGYAPTDTQ------SVGKNNASWTILERVVKE 133
            +A  G++ +G     V+ +    GCD+IGLQETRR+GQ  +   GYV+ +S    G ++ K+G  GVG+ +++++  +   E R  E IS RL+KV L++ GR   V FVVGYAPT+T        V   ++ WT L+  ++E
Sbjct:   96 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIRE 236          
BLAST of mRNA_A-nodosum_M_contig8566.1.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.390e-19
Identity = 55/143 (38.46%), Postives = 84/143 (58.74%), Query Frame = 0
Query:    1 MAVDGKHGVGR-AAEVIDVYQEMGCDIIGLQETRRSGQSILLQAGYVVYYSCESGGDEERKKGQGGVGLTVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVAFVVGYAPTDTQSV---GKNNAS---WTILERVVKE 133
            +   G++ +G    +V+ +    GCD+IGLQETRR GQ  +   GYV+ +S    G ++ K+G+ GVG+ +++++      E R  E IS RL+KV L++ GR   V FVVGYAPT+T  +   G  NA    WT L+  ++E
Sbjct:  165 LVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIRE 305          
BLAST of mRNA_A-nodosum_M_contig8566.1.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 3.550e-19
Identity = 54/143 (37.76%), Postives = 84/143 (58.74%), Query Frame = 0
Query:    1 MAVDGKHGVGR-AAEVIDVYQEMGCDIIGLQETRRSGQSILLQAGYVVYYSCESGGDEERKKGQGGVGLTVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVAFVVGYAPTDTQ------SVGKNNASWTILERVVKE 133
            +A  G++ +G     V+ +    GCD+IGLQETRR+GQ  +   GYV+ +S    G ++ K+G  GVG+ +++++  +   E R  E I  RL+KV L++ GR   VAFVVGYAPT+T        V   ++ WT L+  ++E
Sbjct:   91 LACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQI-GRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIRE 231          
BLAST of mRNA_A-nodosum_M_contig8566.1.1 vs. uniprot
Match: A0A6H5KH32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH32_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 6.120e-19
Identity = 52/143 (36.36%), Postives = 85/143 (59.44%), Query Frame = 0
Query:    1 MAVDGKHGVGR-AAEVIDVYQEMGCDIIGLQETRRSGQSILLQAGYVVYYSCESGGDEERKKGQGGVGLTVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVAFVVGYAPTDT------QSVGKNNASWTILERVVKE 133
            +A  G++ +G     V+ +    GCD+ GLQETRR GQS++   GYV+ ++    G ++ K+G  GVG+ +++++  +   E R  E  S RL+K+ L++ GR   V FVVGYAPT+T      + V   ++SWT L+  ++E
Sbjct:   23 LAYSGRNPIGHNVMTVMQICSAAGCDVKGLQETRREGQSLIAHDGYVIIWTRARAGTKD-KRGVHGVGMAIKEAMWESVGEEGRTVECTSPRLMKMRLQI-GRTCGVTFVVGYAPTETVRTTTGRDVNAKDSSWTALDAAIRE 163          
BLAST of mRNA_A-nodosum_M_contig8566.1.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 8.170e-19
Identity = 53/143 (37.06%), Postives = 84/143 (58.74%), Query Frame = 0
Query:    1 MAVDGKHGVGR-AAEVIDVYQEMGCDIIGLQETRRSGQSILLQAGYVVYYSCESGGDEERKKGQGGVGLTVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVAFVVGYAPTDTQ------SVGKNNASWTILERVVKE 133
            +A  G++ +G     V+ +    GCD+IGLQETRR+GQ  +   GYV+ +S    G ++ K+G  GVG+ +++++  +   E R  E IS RL+KV L++ GR   V F+VGYAPT+T        V   ++ WT L+  ++E
Sbjct:  185 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIRE 325          
BLAST of mRNA_A-nodosum_M_contig8566.1.1 vs. uniprot
Match: A0A6H5KVW4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVW4_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 9.770e-19
Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 0
Query:   15 VIDVYQEMGCDIIGLQETRRSGQSILLQAGYVVYYSCESGGDEERKKGQGGVGLTVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVAFVVGYAPTDTQ------SVGKNNASWTILERVVKE 133
            V+ +    GCD+IGLQETRR GQ      GYV+ +S    G ++ K+G  GVG+ +++++  +   E R  E IS RL+KV L++ GR   V FVVGYAPT+T        V   ++ WT L+  ++E
Sbjct:    3 VMQICSATGCDVIGLQETRRGGQGSTAHDGYVIIWSAARAGTKD-KRGVNGVGMVIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVPFVVGYAPTETVHTTAGGDVSAKDSFWTALDAAIRE 128          
BLAST of mRNA_A-nodosum_M_contig8566.1.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.110e-18
Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 0
Query:   15 VIDVYQEMGCDIIGLQETRRSGQSILLQAGYVVYYSCESGGDEERKKGQGGVGLTVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVAFVVGYAPTDTQ------SVGKNNASWTILERVVKE 133
            V+ +    GCD+IGLQETRR GQ  +   GYV+ +S    G ++ K+G  GVG+ +++++  +   E R  E IS RL+KV L++ GR   V FVVGYAPT+T        V   ++ WT L+  ++E
Sbjct:    3 VMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIRE 128          
BLAST of mRNA_A-nodosum_M_contig8566.1.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.170e-18
Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 0
Query:    1 MAVDGKHGVGR-AAEVIDVYQEMGCDIIGLQETRRSGQSILLQAGYVVYYSCESGGDEERKKGQGGVGLTVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVAFVVGYAPTDTQ------SVGKNNASWTILERVVKE 133
            +A  G+  +G     ++ +    GCD+IGLQETRR GQ  +   GYV+ +S    G ++ K+G  GVG+ +++++  +   E R  E IS RL+KV L++ GR   V FVVGYAPT+T        V   ++ WT L+  ++E
Sbjct:   69 LAYSGRKPIGHNVMTIMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIRE 209          
BLAST of mRNA_A-nodosum_M_contig8566.1.1 vs. uniprot
Match: A0A6H5KEC1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC1_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.630e-18
Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 0
Query:   15 VIDVYQEMGCDIIGLQETRRSGQSILLQAGYVVYYSCESGGDEERKKGQGGVGLTVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVAFVVGYAPTDTQ------SVGKNNASWTILERVVKE 133
            V+ ++   GCD+IGLQETRR GQ  +   GYV+ +S    G ++ K+G  GVG+ +++++  +   E R  E IS RL+KV L++ GR   V FVVGYAPT+T        V   ++ WT L+  ++E
Sbjct:    3 VMQIFSATGCDMIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESGGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGGVDAKDSFWTALDAAIRE 128          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8566.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZE6_9PHAE3.400e-2037.76Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JMB4_9PHAE3.270e-1937.76Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JVN7_9PHAE3.390e-1938.46Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KV75_9PHAE3.550e-1937.76Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KH32_9PHAE6.120e-1936.36Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3Q1_9PHAE8.170e-1937.06Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KVW4_9PHAE9.770e-1939.84Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KBZ6_9PHAE1.110e-1839.84Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JGX2_9PHAE1.170e-1837.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEC1_9PHAE1.630e-1839.84Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 3..133
e-value: 9.5E-10
score: 40.6
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 11..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8566contigA-nodosum_M_contig8566:13814..14212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8566.1.1mRNA_A-nodosum_M_contig8566.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8566 13814..14212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8566.1.1 ID=prot_A-nodosum_M_contig8566.1.1|Name=mRNA_A-nodosum_M_contig8566.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=133bp
MAVDGKHGVGRAAEVIDVYQEMGCDIIGLQETRRSGQSILLQAGYVVYYS
CESGGDEERKKGQGGVGLTVRKSISRAEARPPEFISDRLLKVTLELCGRA
RAVAFVVGYAPTDTQSVGKNNASWTILERVVKE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf