prot_A-nodosum_M_contig856.13.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig856.13.2
Unique Nameprot_A-nodosum_M_contig856.13.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1427
Homology
BLAST of mRNA_A-nodosum_M_contig856.13.2 vs. uniprot
Match: A0A6H5KFK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK5_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 4.430e-56
Identity = 247/759 (32.54%), Postives = 324/759 (42.69%), Query Frame = 0
Query:  326 REEGESPGGRCCWDLVVAPAEPSRSGDITDMNDAMAGLGIKDLGQHLRDLDIGAEGCKTVLNAVAWAFNALTLTRQLAAKQCAEVRTELARAAAQLLTGADFVSDIQAVACEAAKCNRTLITRLVDMELRHWR-----------------------------FSQVCGD---SAADDKMRSSFREEEISESSTV----GFHEESXXXSSNGWP-------------------RRQYGPGTQVSRSQLGRRLGTGYPTG---KCVASHGVTLSLSYVGLQDDVLRQVVTRLLRHCIPQERTGNKKNSKGEGYPKERTCSPLGKPLSGDEESPAHQRGGNGTGKGSVGDEDSARDTVIPLSRLLLRGNFLTDAGALALCPLVEASPTLTTIDLRCNSIGARGVLALSK-----------------------------ALKINPWLHSVTQEGDCGGDPSKGELV--GAVLHARRRLSTTVGDRARAYAFTVIPSSSSQRCRLGTSLGDPQSRPFDSEATGSPPGSHPGRFETSDTNRDGGDGHHAPTHDIGIGREATSKGIPNGLHRRH--LHLMEDGVVESFEKLRITAGPTCRIDLRGCARRSTPLPPVGI-DAEQSAG-TVPTVSPERHDSALSTGSAPLRSCSNCLNLSRRRDRGLLGRRRTDVTHPSLAVGAQSLPNFSSLRERRVVTQAGESIHSDDRFADLVSKQLMSTTRTPH--RKGRCRNRRKANATSHWLSSKAETQEVEDLKSLLSASR 989
            + +G  P   C W  V   +EP  +       + MA LG+  LGQ LR+  +  EG +  L AVA    AL LTR+LAA+QCAEVRTELA    +L   A  VSD +A A   + CNRT++ RLV  E++ WR                             FS   GD   S +DDK  ++ R  + +E + V    G   E+ XX                         R + G G + SR Q   + GTG+      K  A  G TL+LS V L D  L QVV +LLR C  + R  +     G G   E                   Q+GG G   G  G    +  T++PL  LLLRGN LTDAGA+AL PLVEAS +L  IDLR N I  +G LAL K                             AL  +PW++ VT E   G D  +G     G VL A+RR  +TV DRARA+AF  IP S+       T    P S               PG +   + N     G HAPTH   IG          G +RR+   +L     +E      I A P C IDLRGC RR  PLP   + D EQ    + PT SP R D     GS   +    C  + R  DR  +G   T V   + +V  +     +S      VT+   +         L +  + S++R P   R+ +  +R +    +   + K+E QE+EDL SLLS SR
Sbjct:   17 KRQGNKP---CLW--VALGSEPDGT------RETMAVLGLDTLGQSLRERGVRGEGARMALTAVARLLGALRLTRRLAAQQCAEVRTELALTLGRLSCRAMLVSDTRAAARRTSICNRTVLLRLVRSEMQLWRLRAAAAELQQSSNEKEAMRTAQAEQGGLFFSPGEGDANPSTSDDKHPANVRRYQDAERAAVTMNWGTDSETEXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKGGRGERRSRIQPKGKEGTGFERAQRKKHPAGAGFTLNLSGVDLDDQTLHQVVRKLLRQCTDRSRAWS-----GAGAMHE-------------------QQGGAGK-DGRNGQNTLSSSTIMPLRCLLLRGNNLTDAGAIALVPLVEASCSLAAIDLRGNRIETKGELALKKVMACGVTGGRATKRSLEHRIMFEESLNQGALTRSPWVYRVTSEEVSGSDAREGSTSTGGVVLRAKRRPMSTVRDRARAHAFKRIPPSNKTIPGKATISPGPCSASI----------GQPGEYHAGNDN-----GGHAPTHGSSIGCRQDENNEGQGANRRNGGSNLTPPTDLERLMNTPIAASPICTIDLRGCPRRPLPLPLAAVGDFEQGEHLSPPTPSPTRVD-----GSPSEQQRHGCGGVGRGSDRHQVGHAETCVNQNTSSVPRRFDAASTSSGHNGQVTRLMRT--------GLAANLMGSSSRRPRYTRRRKPASRGEDRLFAPKSAPKSEAQELEDLTSLLSISR 711          
BLAST of mRNA_A-nodosum_M_contig856.13.2 vs. uniprot
Match: D7G0E3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0E3_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 2.100e-48
Identity = 235/742 (31.67%), Postives = 322/742 (43.40%), Query Frame = 0
Query:  388 AVAWAFNALTLTRQLAAKQCAEVRTELARAAAQLLTGADFVSDIQAVACEAAKCNRTLITRLVDMELRHWRFSQVCG--DSAADDK--MRSSFREE----------EISESSTVGFHEESXXXSSNG--------W----------------------PRRQYGPGTQVSRSQLGR-----------RLGTGYPTGKCV---ASHGVTLSLSYVGLQDDVLRQVVTRLLRHCIPQERTGNKKNSKGEGYPKERTCSPLGKPLSGDEESPAHQRGGNGTGKGSVGDEDSARDTVIPLSRLLLRGNFLTDAGALALCPLVEASPTLTTIDLRCNSIGARGVLALSKALKINPWLHSVTQEGDCGGDPSKGELV--GAVLHARRRLSTTVGDRARAYAFTVIPSSSSQRCRLGTSLGDPQSRPFDSEATGSPPGS-HPGRFETSDTNRDGGDGHHAPTHDIGIGREATSKGIPNGLHRRHL--HLMEDGVVESFEKLRITAGPTCRIDLRGCARRSTPLPPVGI-DAEQSAGTVPTVSPERHDSALSTGSAPLRSCSNCLNLSRRRDRGLLGRRRTDVTHPSLAVGAQSLPNFSSLRERRVVTQAGESIHSDDRFADLVSKQLMSTTRTPHRKGRCRNRRKANATSHWL-SSKAETQEVEDLKSLLSASRMMLAEAD---EIVSLESNRNHAASTPIMNSVATDRRAQGDATLRNNKVGEAGARKTSL--GI-----VNSPLDTE 1054
            A  W++      R LAA+QCAEVRTELA A  +L   A  VSD +A A   + CNRTL+ RLV  E+R WR        + +A +K  +R++  E           + + S+T   H  +   S +         W                          YG G ++ RS  GR             GTG    K     A  G  L+LS   L D+ L QVV +LLR C  + R        G G   E                   Q+GG G   G  G    +   ++PL  LLLRGN LTDAGALAL PLVEAS +L  IDLR N IG +G LAL KAL  +PW++ VT E   G D  +G +   G VL A+RR  +TV DRARA+AF  IP S+       T  G    RP    A    PG  H G       N DGG    AP H   IG          G  R++   +L     +E      I A P C IDLRGC+RR  PLP   + D EQ       +SP++    +  GS   +    C  + R  DR   G   T V   + +V  +     +S  +   VT+   +         L +  + S++R P   GR   R+ A+     + + K+E QE+EDL SLLS SR + + A+   E  +L   R    +T    S +++   + D++       ++G   T+L  G+      N+P +T+
Sbjct:  426 ACGWSWR-----RHLAAQQCAEVRTELALALGRLSCRAMLVSDTRAAARRTSICNRTLLLRLVRSEMRLWRLRAAAAATEQSAREKEVLRTALTERGRPFFPPGEGDANPSTTYDKHPTNVCRSPDAESAAFTVNWGTDSEIEAAGDGXXXXXXXXXXXXXXYGDGEEIERSIGGRGERRSRMQPKGNEGTGVERAKRKKRPAGAGFHLNLSGFDLDDETLHQVVRKLLRQCTDRSRAWP-----GAGAMYE-------------------QQGGAGE-DGRNGQNTLSSSAIMPLRCLLLRGNNLTDAGALALVPLVEASSSLAAIDLRGNRIGTKGELALKKALTRSPWVYRVTSEEASGSDAREGSISTGGVVLRAKRRPMSTVRDRARAHAFKRIPPSNK------TIPGKATIRPSPCSAGDDQPGEYHAG-------NDDGG---RAPAHGSSIGCRQDENNDGQGASRQNCGSNLTPPTDMERLINTPIAASPICTIDLRGCSRRPLPLPLAAVGDFEQGE----RLSPQKPYPTVE-GSPSEQQRHGCGGVGRGSDRHQAGDAETCVNQNTSSVPRRVHAASTSRGQDGQVTRLMRT--------GLAANLMGSSSRRPRYTGR---RKPASRGEDCVFAPKSEAQELEDLTSLLSISRRIFSRAEGFEETHNLPEERRTQGATRAPRSPSSENGKRPDSSGTEPDTSKSGLPGTALVAGLGRSHSTNAPEETD 1105          
BLAST of mRNA_A-nodosum_M_contig856.13.2 vs. uniprot
Match: A0A7S1TRJ7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRJ7_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.020e-5
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0
Query:  615 EDSARDTVIPLSRLLLRGNFLTDAGALALCPLVEASPTLTTIDLRCNSIGARGVLALSKALKINPWLHSVTQEGDCG 691
            +D+       L  ++LRGN LT AGALAL  LV AS TL ++DLR   IG RG+ AL +AL +N  +  V +  + G
Sbjct:  792 DDAVETHKDDLGMIVLRGNELTSAGALALARLVSASHTLRSLDLRDCRIGERGIKALEEALALNGSVRKVRRRAEPG 868          
BLAST of mRNA_A-nodosum_M_contig856.13.2 vs. uniprot
Match: A0A6H5KDR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDR2_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.300e-5
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    1 MSPVEMKRFRWSEDQVEVLKQANAALR--------------------SQLVDTARLLAGAEHSFDSVRQGSKNTRGTLSELSARLEEKE 69
            MSP E+KR +WSE+Q E+LK+ANA +R                    +QL+++ RLLA AEHSF +V  G ++   T++ LS  L++K+
Sbjct:  201 MSPSEVKRLQWSEEQGELLKEANATIRYGLKALPGRMLELSRSLASRNQLLESGRLLAEAEHSFRTVTAGFEDAATTITRLSVGLDKKK 289          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig856.13.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KFK5_9PHAE4.430e-5632.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0E3_ECTSI2.100e-4831.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1TRJ7_9STRA1.020e-544.16Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6H5KDR2_9PHAE2.300e-539.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 149..176
NoneNo IPR availableCOILSCoilCoilcoord: 100..120
NoneNo IPR availableCOILSCoilCoilcoord: 51..92
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 625..649
e-value: 6.9
score: 11.2
coord: 650..677
e-value: 0.071
score: 22.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 734..752
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1199..1216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1199..1285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 568..617
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1255..1279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 765..784
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..519
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1217..1232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..519
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1062..1131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 734..799
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 624..688
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 9..185
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 650..672
e-value: 0.003
score: 17.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 620..710
e-value: 8.5E-12
score: 46.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig856contigA-nodosum_M_contig856:81037..107288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig856.13.2mRNA_A-nodosum_M_contig856.13.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig856 76998..107788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig856.13.2 ID=prot_A-nodosum_M_contig856.13.2|Name=mRNA_A-nodosum_M_contig856.13.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1427bp
MSPVEMKRFRWSEDQVEVLKQANAALRSQLVDTARLLAGAEHSFDSVRQG
SKNTRGTLSELSARLEEKENALRETEKTLRRSRAEVTKLKKSVASLNVGL
SKAEKRLQDRERGLDATKRAMEGMARGRQEEVESRIMETVKRSSAERTSK
RAVAKIDDLRLRAEEAEECCRELDAEKRVLLQHLVSVRDAPNSIGAAKGD
VDWETNWRQTTRSLLERAVSNWAVKTLSSRARSCDKISEVRRGTGEERTS
AYTGLSPETDFPSVPRRPDSDSCSPSTILPAGLSRNGAISADGTERLVTA
SLWDAGTNDDRDLPMLKVVRVNRAPREEGESPGGRCCWDLVVAPAEPSRS
GDITDMNDAMAGLGIKDLGQHLRDLDIGAEGCKTVLNAVAWAFNALTLTR
QLAAKQCAEVRTELARAAAQLLTGADFVSDIQAVACEAAKCNRTLITRLV
DMELRHWRFSQVCGDSAADDKMRSSFREEEISESSTVGFHEESSSSSSNG
WPRRQYGPGTQVSRSQLGRRLGTGYPTGKCVASHGVTLSLSYVGLQDDVL
RQVVTRLLRHCIPQERTGNKKNSKGEGYPKERTCSPLGKPLSGDEESPAH
QRGGNGTGKGSVGDEDSARDTVIPLSRLLLRGNFLTDAGALALCPLVEAS
PTLTTIDLRCNSIGARGVLALSKALKINPWLHSVTQEGDCGGDPSKGELV
GAVLHARRRLSTTVGDRARAYAFTVIPSSSSQRCRLGTSLGDPQSRPFDS
EATGSPPGSHPGRFETSDTNRDGGDGHHAPTHDIGIGREATSKGIPNGLH
RRHLHLMEDGVVESFEKLRITAGPTCRIDLRGCARRSTPLPPVGIDAEQS
AGTVPTVSPERHDSALSTGSAPLRSCSNCLNLSRRRDRGLLGRRRTDVTH
PSLAVGAQSLPNFSSLRERRVVTQAGESIHSDDRFADLVSKQLMSTTRTP
HRKGRCRNRRKANATSHWLSSKAETQEVEDLKSLLSASRMMLAEADEIVS
LESNRNHAASTPIMNSVATDRRAQGDATLRNNKVGEAGARKTSLGIVNSP
LDTEWAPSYDTAHKSSFEPRKPARLLDSSERGVTWNHQSKGLKRRSLDGR
QEGRGSVDLSLANQHAERRRRDPRHLGKKVNSEGLGGITTIKACDARETQ
ADDATEGTAKMVADNLKSLQEENPPIQGPANSANEGRATVSFHEKEHYAA
GGTARRDAEHASRNSDSTRVQEASTNDCQNKIARDPPHTYGAGKDMTLTI
DRDSVVRPGDSKEDLQRQGGVRDKTSRSRLTSADGFQDVAYAQKGAIPSR
WKNDESSAAWNHLAGNSLQDSATGYGESQKQDPRIHEAFATNERCSGGAD
GIDQHSRQRVSVGNAILSGGDSPGGVLIETGHGLDLTPPKVIADVVLPGS
AEEDENEPGRVVLRRIEALERAMQSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf