prot_A-nodosum_M_contig855.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig855.7.1
Unique Nameprot_A-nodosum_M_contig855.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length155
Homology
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BLAST of mRNA_A-nodosum_M_contig855.7.1 vs. uniprot
Match: D7G007_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G007_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 1.280e-23
Identity = 65/123 (52.85%), Postives = 83/123 (67.48%), Query Frame = 0 
Query:    1 MLRCTFNTKSNRLSSLHMSFDPSLPARQLARAAMLQGRATTGMAGMMAGLLGIGGSAGVASSGVVSAPVCMDAAANRGLTSA------EMSGVPQEAFAGQEEGILHSVLEDLLEGRVSSTLV 117
            ML+ +F+TKSNRL S+  SFDP++PARQLARAAMLQGRAT GMAGMMAG+LG+GG   V+S           AA +R   S+        +      F GQ+EG+LHSVL+D+ E RVSST++
Sbjct:  316 MLKASFSTKSNRLCSVQFSFDPTVPARQLARAAMLQGRATPGMAGMMAGMLGMGG-VDVSSLMAAKGGGVPSAARDRASESSGAXXXXXXTAANPPPFVGQDEGVLHSVLQDIREWRVSSTVL 437
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BLAST of mRNA_A-nodosum_M_contig855.7.1 vs. uniprot
Match: A0A6H5KRD8_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD8_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 8.450e-16
Identity = 42/55 (76.36%), Postives = 50/55 (90.91%), Query Frame = 0 
Query:    1 MLRCTFNTKSNRLSSLHMSFDPSLPARQLARAAMLQGRATTGMAGMMAGLLGIGG 55
            ML+ +F+TKSNRL S+  SFDP++PARQLARAAMLQGRAT GMAGMMAG+LG+GG
Sbjct:  540 MLKASFSTKSNRLCSVQFSFDPTVPARQLARAAMLQGRATPGMAGMMAGMLGMGG 594
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig855.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G007_ECTSI1.280e-2352.85BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KRD8_9PHAE8.450e-1676.36BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig855contigA-nodosum_M_contig855:283995..285971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig855.7.1mRNA_A-nodosum_M_contig855.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig855 283995..285971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig855.7.1 ID=prot_A-nodosum_M_contig855.7.1|Name=mRNA_A-nodosum_M_contig855.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=155bp
MLRCTFNTKSNRLSSLHMSFDPSLPARQLARAAMLQGRATTGMAGMMAGL
LGIGGSAGVASSGVVSAPVCMDAAANRGLTSAEMSGVPQEAFAGQEEGIL
HSVLEDLLEGRVSSTLVHNLAHGKSYLRVYPLNGDTPGVKHFIGVVENAN
IRGGA
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