prot_A-nodosum_M_contig854.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig854.9.1
Unique Nameprot_A-nodosum_M_contig854.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length732
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig854.9.1 vs. uniprot
Match: D7G867_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G867_ECTSI)

HSP 1 Score: 543 bits (1400), Expect = 3.160e-169
Identity = 328/679 (48.31%), Postives = 418/679 (61.56%), Query Frame = 0 
Query:   23 ASARDTVSTEKRLKPVLLDLPTIVAPGLVKNQGANMEEPFRAVGLTTVEGPHQTGNSSRLDSCRKNPFCLP---------DVFWKAAVLAPARSRGHVGGWLAAKLGGGDQG-----------EIGIERAWPALKEGDSMAMVTEADREISCGSSATSKLIHRSVRKVPMGERTGSSEASINPQRMHLCVNRISIEEGRRLGPSLELSRALEATSLVVFAATPRDQDRFFWSPLHPKPDWSKAREDLGCALRCADSEWGA-----VPLLVVISIQDSVLNRGEKRRSGSA--SLRECVLDDAWDGLGLQEVAQRGVSARVTVVGLHEFESRSKEAAASREGLVFSGEAEEASSDDLATSVAELSGQAPKQPLVATRSLQEMFKTAISRATRDNRYASAAGLILPACRFEDPPLEAVVGAASRATAHVCRLLERKADAWPMREFAVVVSSSVGQPGDIDGEHRKEVAFVPGAARPAVGELLRSPFLK---GFGVGQDTAADMRLVVETSGGLPLDW-TSCRSLGLELSHAASSPSFFA----VVQAARLPPVPMEIAETFSPEALAGRGNRRPLGAKGAWDRVEQLEGYLGRDLLPKDLRYRLAEALAGGTMMRASPPPWRTLVRDTLTRRV------ESAVGHPVAVHFVVASGQDRLAQRDD--LVPGLLEAEDFRVP 658
            A   D   + +  KP  LD+  +V+PG+ KNQG   EE FRAVGLTTV  P     +    S   N   LP          +FWKA V+AP+ +RG+VG WL AK GG   G           E+      P L +G  +    E + E SCGSS TS+L+ R +R++       S ++S  PQ +HLCV R+SI EG RL PS +LS  L+A S+V+FAATPRDQ+RFFWSPLHPKPDWS+A+ +L  AL  A    G      VP+LVVI ++DSVL R     + +A    RE +L+DAW+GLGL+EVAQ G S RV +VGLHEFESRSK AAA   G+VF+G  E+A S+D+A  +AEL+ +AP+ PLVATR LQE+  TA+SRAT D+RYA A GL LP  R+EDPPL  VV AA+RAT HVC LL R++ AWP+ EFA   +        + G  R+E+ +VPGAAR A GE+  SP         V    A  ++  +E SG LPLDW T   S G+    + ++P F      V++AA LPP+P ++AE FSP  LAGR   RPLG + AW+RVE+LE YLGR L+ ++LR+RLAEALAGG MM+  PPPWRTLVRD + RRV      E A   P+ VHF+ + GQDRL        VP LLEAE F  P
Sbjct: 1093 AKRHDVSRSGELRKPRPLDVAAVVSPGVAKNQGEETEEAFRAVGLTTVWRP--VTKARERSSSPDNSLLLPVGGLSPSPPHLFWKAVVVAPSHTRGNVGAWLEAKFGGSAAGGGAEGMSAYRRELVSHGLCPELDKG--VVSGAEDEEESSCGSSGTSRLMFRELRELRTTTPARSEKSSAPPQWIHLCVQRVSIHEGCRLEPSSQLSEKLKAASVVIFAATPRDQERFFWSPLHPKPDWSQAKAELRLALESASPRGGGTASVGVPVLVVIPVKDSVLQRDAGCANPAAFDRTRERILEDAWEGLGLREVAQYGCSFRVALVGLHEFESRSKAAAARGAGVVFAGSLEDACSEDVAGKLAELAERAPRHPLVATRCLQELLNTAVSRATTDDRYADAVGLPLPPSRYEDPPLGCVVEAANRATEHVCHLLVRRSSAWPIAEFAATATV-------VHGRQRREMMYVPGAARAAGGEIAGSPLDAPDCATHVEPSDAGRLKTALEASGALPLDWETVLPSFGMP---SRTNPGFAGGADVVLRAAFLPPIPPKLAEAFSPNVLAGREGARPLGPEVAWNRVEELETYLGRGLMAQELRFRLAEALAGGVMMKGPPPPWRTLVRDAIARRVVLARSGEGAGLRPLVVHFIASFGQDRLEGETGRGAVPRLLEAEIFGGP 1757
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig854.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G867_ECTSI3.160e-16948.31PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig854contigA-nodosum_M_contig854:105420..109400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig854.9.1mRNA_A-nodosum_M_contig854.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig854 105294..109642 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig854.9.1 ID=prot_A-nodosum_M_contig854.9.1|Name=mRNA_A-nodosum_M_contig854.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=732bp
MNETRRGIEQQRWNSGSEVGSGASARDTVSTEKRLKPVLLDLPTIVAPGL
VKNQGANMEEPFRAVGLTTVEGPHQTGNSSRLDSCRKNPFCLPDVFWKAA
VLAPARSRGHVGGWLAAKLGGGDQGEIGIERAWPALKEGDSMAMVTEADR
EISCGSSATSKLIHRSVRKVPMGERTGSSEASINPQRMHLCVNRISIEEG
RRLGPSLELSRALEATSLVVFAATPRDQDRFFWSPLHPKPDWSKAREDLG
CALRCADSEWGAVPLLVVISIQDSVLNRGEKRRSGSASLRECVLDDAWDG
LGLQEVAQRGVSARVTVVGLHEFESRSKEAAASREGLVFSGEAEEASSDD
LATSVAELSGQAPKQPLVATRSLQEMFKTAISRATRDNRYASAAGLILPA
CRFEDPPLEAVVGAASRATAHVCRLLERKADAWPMREFAVVVSSSVGQPG
DIDGEHRKEVAFVPGAARPAVGELLRSPFLKGFGVGQDTAADMRLVVETS
GGLPLDWTSCRSLGLELSHAASSPSFFAVVQAARLPPVPMEIAETFSPEA
LAGRGNRRPLGAKGAWDRVEQLEGYLGRDLLPKDLRYRLAEALAGGTMMR
ASPPPWRTLVRDTLTRRVESAVGHPVAVHFVVASGQDRLAQRDDLVPGLL
EAEDFRVPLSFSASPALLKRVTPITPDIRSAGGSKKQRRRHSSDYYILFG
NEEPADDPSCMDADQDARQTCLQPFLRGNLF*
back to top