prot_A-nodosum_M_contig854.39.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig854.39.1
Unique Name	prot_A-nodosum_M_contig854.39.1
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	322

Homology

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BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot
Match: D7G880_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G880_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 2.990e-66
Identity = 253/301 (84.05%), Postives = 273/301 (90.70%), Query Frame = 0

Query:    1 MFIKKDTRKIPDILNDENDDREELHLGRRSSEFVSNGVKVVCSSRNTPRLQKLQRMSLYDNMLTNVKGIGTLAATPLKHLNLGRNQLKSLPAELSKVGTLETLWADDNAIQDFPRAIIQLKRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIHSVAIEIEAAWGRVDFATGKLVPESVGSPRTVEVVVRGNPMGIAEPTKVGNEA 301
            MF+KKDTRKIPDIL DE D+REELHLGRRSSEFVSNG+KVVCSSR+ PRLQKLQ++SLYDNML++VKGIG L+ATPLKHLNLGRNQLKSLP EL KVGTLETLW DDNAI DFPR+++QLKRL+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +++EAAWGR D  TGKL P +V SPR  EVV+RGNP  IA+P + G  A
Sbjct:    1 MFVKKDTRKIPDILADEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDNAITDFPRSVLQLKRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVEAAWGRADPVTGKLDPATVDSPRKTEVVIRGNP--IADPKQAGGSA 299

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BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot
Match: A0A835YNM3_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM3_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.880e-36
Identity = 71/124 (57.26%), Postives = 90/124 (72.58%), Query Frame = 0

Query:    1 MFIKKDTRKIPDILNDENDDREELHLGRRSSEFVSNGVKVVCSSRNTPRLQKLQRMSLYDNMLTNVKGIGTLA--ATPLKHLNLGRNQLKSLPAELSKVGTLETLWADDNAIQDFPRAIIQLKR 122
            MFIKKD RKI +IL D  D REEL LGRRS EF   G++V+CS  N P L +L+ +S+YDN+LT+++G+G L   AT L HLNLGRNQL++LP EL  V TLETLW DDN + +FP  + +L R
Sbjct:    1 MFIKKDLRKINEILADREDSREELRLGRRSGEFKG-GLRVICSPHNIPALAQLRSLSVYDNLLTSIEGVGLLGNGATALLHLNLGRNQLRTLPQELGLVSTLETLWLDDNLLDEFPLPVTELTR 123

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BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot
Match: A0A1V9YVQ5_9STRA (Membrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVQ5_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.730e-27
Identity = 61/120 (50.83%), Postives = 82/120 (68.33%), Query Frame = 0

Query:    1 MFIKKDTRKIPDILNDENDDREELHLGRRSSEFVSNGVKVVCSSRNTPRLQKLQRMSLYDNMLTNVKGIGTLAATPLKHLNLGRNQLKSLPAELSKVGTLETLWADDNAIQDFPRAIIQL 120
            MF+ KD RKIP I+ DE D REEL LGRRS+EF  + +KV+CS  N P    L+R+SLYDN L +V  IG LA +PL+ L++G N L SLP E+  +  LE LW  +NA++  P +I++L
Sbjct:    1 MFVVKDLRKIPVIMLDEADSREELRLGRRSAEFQGS-LKVLCSLDNLPAFGNLRRLSLYDNQLQSVDRIGILANSPLQVLDIGYNLLTSLPTEIGTLKNLEELWVTNNALESIPESILEL 119

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BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot
Match: A0A067CJY8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJY8_SAPPC)

HSP 1 Score: 117 bits (294), Expect = 2.790e-27
Identity = 62/108 (57.41%), Postives = 76/108 (70.37%), Query Frame = 0

Query:    1 MFIKKDTRKIPDILNDENDDREELHLGRRSSEFVSNGVKVVCSSRNTPRLQKLQRMSLYDNMLTNVKGIGTLAATPLKHLNLGRNQLKSLPAELSKVGTLETLWADDN 108
            MF++KD RKIP I+ DEND REEL LGRRS+EF+ N +KV+CS  N P    L+R+SLYDN L +V  IG LA TPL  L+LG N L SLPAE+  +  LE LW  +N
Sbjct:    1 MFVQKDLRKIPAIMVDENDTREELRLGRRSAEFLGN-LKVLCSLDNLPAFGNLRRLSLYDNQLHSVDRIGILANTPLAVLDLGYNHLTSLPAEIGALKNLEELWVTNN 107

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BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot
Match: A0A6G0WAD8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAD8_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.080e-25
Identity = 55/118 (46.61%), Postives = 81/118 (68.64%), Query Frame = 0

Query:    1 MFIKKDTRKIPDILNDENDDREELHLGRRSSEFVSNGVKVVCSSRNTPRLQKLQRMSLYDNMLTNVKGIGTLAATPLKHLNLGRNQLKSLPAELSKVGTLETLWADDNAIQDFPRAII 118
            MF+ KD RKIPDI+ D+ND RE+L LGRR++EF  + + ++C+  N     KLQ++SLYDN L +++ IG LA TPL  L+LG+NQL+SLP E+  +  L+ LW  +N +     A++
Sbjct:    1 MFVVKDLRKIPDIVRDDNDTREQLRLGRRAAEFQGD-LSILCTPSNVAAFSKLQKLSLYDNNLHSIERIGLLAETPLAILDLGQNQLESLPDEMGTLVHLKELWVTNNKLMTISEAVL 117

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BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot
Match: W4FL85_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FL85_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.010e-25
Identity = 53/104 (50.96%), Postives = 76/104 (73.08%), Query Frame = 0

Query:    1 MFIKKDTRKIPDILNDENDDREELHLGRRSSEFVSNGVKVVCSSRNTPRLQKLQRMSLYDNMLTNVKGIGTLAATPLKHLNLGRNQLKSLPAELSKVGTLETLW 104
            MF+ KD RK+P+I+ D  DDRE+L LGRRS+EF  N ++++CS  N P   +LQ++SLYDN L+++ GIG L++TPL  L+LG+NQL  LP E+  +  L+ LW
Sbjct:    1 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLSSIDGIGLLSSTPLSILDLGQNQLDHLPHEIGSLRHLKELW 103

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BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot
Match: A0A485L9Z5_9STRA (Aste57867_17909 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9Z5_9STRA)

HSP 1 Score: 111 bits (277), Expect = 7.840e-25
Identity = 54/107 (50.47%), Postives = 76/107 (71.03%), Query Frame = 0

Query:    1 MFIKKDTRKIPDILNDENDDREELHLGRRSSEFVSNGVKVVCSSRNTPRLQKLQRMSLYDNMLTNVKGIGTLAATPLKHLNLGRNQLKSLPAELSKVGTLETLWADD 107
            MF+ KD RKIP+IL D  D+RE++ LGRRS+EF  N + V+C+  N   L KLQ++SLYDN L +++ IG L+ TPL  L+LG+NQL+ LP E+  + TL+ LW  +
Sbjct:    1 MFVVKDLRKIPEILQDPEDEREQMRLGRRSAEFSGN-LDVLCTPSNVTALTKLQKLSLYDNQLVSIERIGLLSKTPLCILDLGQNQLERLPDEIGSITTLKELWVSN 106

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BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot
Match: A0A1V9YE43_9STRA (Leucine rich repeat protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YE43_9STRA)

HSP 1 Score: 111 bits (277), Expect = 7.840e-25
Identity = 60/108 (55.56%), Postives = 73/108 (67.59%), Query Frame = 0

Query:    1 MFIKKDTRKIPDILNDENDDREELHLGRRSSEFVSNGVKVVCSSRNTPRLQKLQRMSLYDNMLTNVKGIGTLAATPLKHLNLGRNQLKSLPAELSKVGTLETLWADDN 108
            MF+ KD RKIP I+ DE D REEL LGRRS+EF  + +KV+CS  N P    L+R+SLYDN L +V  IG LA TPL  L+LG N L SLPAE+  +  LE LW  +N
Sbjct:    1 MFVVKDLRKIPAIMVDEADSREELRLGRRSAEFQGS-LKVLCSLDNLPAFGNLRRLSLYDNQLRSVDRIGILANTPLAVLDLGYNHLTSLPAEIGALKNLEELWVTNN 107

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BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot
Match: W4FJA0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJA0_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.330e-22
Identity = 58/148 (39.19%), Postives = 88/148 (59.46%), Query Frame = 0

Query:    1 MFIKKDTRKIPDILNDENDDREELHLGRRSSEFVSNGVKVVCSSRNTPRLQKLQRMSLYDNMLTNVKGIGTLAATPLKHLNLGRNQLKSLPAELS----------------------KVGTL---ETLWADDNAIQDFPRAIIQLKRL 123
            MF+ KD RK+P+I+ D  DDRE+L LGRRS+EF  N ++++CS  N P   +LQ++SLYDN L+++ GIG L++TPL  L+LG+NQL  LP E+                       ++G+L   + LW  +N +   P +++ L  L
Sbjct:    1 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLSSIDGIGLLSSTPLSILDLGQNQLDHLPHEVHSMQPRIGNSCNLTPILVLGRIVQIGSLRHLKELWLSNNWLTSVPDSVLTLPLL 147

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BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot
Match: A0A024TAP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAP0_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.830e-22
Identity = 49/104 (47.12%), Postives = 74/104 (71.15%), Query Frame = 0

Query:    1 MFIKKDTRKIPDILNDENDDREELHLGRRSSEFVSNGVKVVCSSRNTPRLQKLQRMSLYDNMLTNVKGIGTLAATPLKHLNLGRNQLKSLPAELSKVGTLETLW 104
            MF+ KD RK+ +I+ D  D RE++ LGRRSSEF  N ++++C+  N P   +L ++SLYDN LT+++GIG L +TPL  L+LG+N+L+ LP E+  +  L+ LW
Sbjct:    1 MFVVKDLRKVAEIVADPKDAREQMRLGRRSSEFQGN-LRILCTPANIPAFSRLTKLSLYDNQLTSIEGIGLLESTPLSILDLGQNRLEHLPDEIGCLRHLKELW 103

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig854.39.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20


Match Name	E-value	Identity	Description
D7G880_ECTSI	2.990e-66	84.05	Hypothetical leucine rich repeat protein n=2 Tax=E...	[more]
A0A835YNM3_9STRA	3.880e-36	57.26	Leucine rich repeat protein n=1 Tax=Tribonema minu...	[more]
A0A1V9YVQ5_9STRA	2.730e-27	50.83	Membrane protein n=1 Tax=Thraustotheca clavata Tax...	[more]
A0A067CJY8_SAPPC	2.790e-27	57.41	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
A0A6G0WAD8_9STRA	1.080e-25	46.61	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
W4FL85_9STRA	2.010e-25	50.96	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A485L9Z5_9STRA	7.840e-25	50.47	Aste57867_17909 protein n=1 Tax=Aphanomyces stella...	[more]
A0A1V9YE43_9STRA	7.840e-25	55.56	Leucine rich repeat protein n=1 Tax=Achlya hypogyn...	[more]
W4FJA0_9STRA	2.330e-22	39.19	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
A0A024TAP0_9STRA	3.830e-22	47.12	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 50..72 e-value: 160.0 score: 3.3 coord: 77..97 e-value: 33.0 score: 9.0 coord: 143..165 e-value: 13.0 score: 12.4 coord: 189..211 e-value: 53.0 score: 7.3 coord: 212..235 e-value: 13.0 score: 12.3 coord: 120..142 e-value: 0.31 score: 20.1 coord: 166..188 e-value: 10.0 score: 13.3
None	No IPR available	SMART	SM00364	LRR_bac_2	coord: 77..93 e-value: 160.0 score: 4.5 coord: 143..162 e-value: 180.0 score: 4.0 coord: 189..208 e-value: 97.0 score: 6.2 coord: 212..232 e-value: 220.0 score: 3.5 coord: 120..139 e-value: 40.0 score: 9.1
None	No IPR available	PANTHER	PTHR48051	FAMILY NOT NAMED	coord: 48..254
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 49..251
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 22..260 e-value: 2.1E-49 score: 169.8
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 122..179 e-value: 2.5E-9 score: 36.8
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 122..143 score: 7.496336
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 76..97 score: 7.065096

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig854	contig	A-nodosum_M_contig854:277632..284797 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig854.39.1	mRNA_A-nodosum_M_contig854.39.1	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig854 277020..284797 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig854.39.1 ID=prot_A-nodosum_M_contig854.39.1|Name=mRNA_A-nodosum_M_contig854.39.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=322bp
MFIKKDTRKIPDILNDENDDREELHLGRRSSEFVSNGVKVVCSSRNTPRL
QKLQRMSLYDNMLTNVKGIGTLAATPLKHLNLGRNQLKSLPAELSKVGTL
ETLWADDNAIQDFPRAIIQLKRLEELRLSGNRISEVPEDIAALSGLRVLA
LDNNDLKTVPAAIGKLSRLRCLLLRQNELEELPPEIGNLLDLRTLGISSN
RLMSLPGSLGRLTMLEYIFANGNRLHSLPPELAELLNLKKANFANNSIHS
VAIEIEAAWGRVDFATGKLVPESVGSPRTVEVVVRGNPMGIAEPTKVGNE
AVTKAPGSAVDESLAAREDTQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt