prot_A-nodosum_M_contig854.31.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig854.31.3
Unique Nameprot_A-nodosum_M_contig854.31.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length859
Homology
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BLAST of mRNA_A-nodosum_M_contig854.31.3 vs. uniprot
Match: A0A6H5JTB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB3_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 8.110e-22
Identity = 239/676 (35.36%), Postives = 292/676 (43.20%), Query Frame = 0 
Query:    1 MGVASSLNHDELKALDVQGLTNLVYEAGLPQHCQACLDFGIDGDMVIKLSRDQLDEILRRAGIDSDDEIELQLQTLDKIKSSTIDGNKLDRDRLKELLWHYD-GDFKEWDGSPETFDWDGISVELDKRITAIHISNRNFYGEIPPDLGDLAHLE---------------------QFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLPRR-----------------------------------VFAALSSSLVFLNLSRNAFQGEMPLGEL--------LPRPGKEGITNQKEAENSGSCEETKVALATEMTLSPLSYLNLSRNKLTGHIPEEIGALDSLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGLRSLRLEGNPSLQGPIPGYLASRSECMVSADETVLEDTEARMLGSRLEEWFLVPRKA 611
            MGVA SL  +EL AL V  L +L      P+H QA +DFGIDG M+  L  DQL + L RAG++    +   L+ ++ I+   ID +KLDR+ L+ +L   D GD +E  G  E   W G+SV+ D RI A++++NR+  GE+P  L ++++LE                      F                                                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                           XXXXXXXXX                    L RR                                   + + LSSSLV+LNL  NAF+G++P+  L        + R  + G  +Q + +   S  +   + A  ++ SPLSYLNL  NK TGH+PEEIG+L SL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                        TGLRSLRLE NPSL+GPIP  LAS   C V AD+ VLEDTEA MLGS+L+EWFL+PRKA
Sbjct:    1 MGVAMSL--EELGALSVVELADLAP----PEHRQASIDFGIDGHMLTSLPLDQLQDALARAGVEDKQHLVYLLEEIENIRRPKIDPSKLDRENLRAILERSDSGDHEELSGRSE---WSGVSVDSDDRIIALNVTNRHLSGELPAALFEISNLEYLHATSNLFAAKGAKLLAIGLSFESQSLHHPPTFCLRHIPCLLFSCPFLGGIVWISLYTILPIGAIPDTIGDLKRLVSLKLDHNSLTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANKARRWISSPELASLHFLVELRLRENRLAGKISPMLVNMQSXXXXXXXXXALQGHIPESLGEMTNLRELWLGRRENQXXXXXXXXXXXXXXXXXXXXSRNKALWKIHPHILSTLSSSLVYLNLGHNAFEGDLPVSPLSSHSAGGRVRRGSRSG--SQSDGQGRNSRRKRSESAAAVVSASPLSYLNLCHNKFTGHVPEEIGSLTSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDDGGGLGRLSSLEILRLDGNTFHGIVPAALGNLARLEVLHLQLDRLWALAVRDNNLSGRVPESLGCL-------------------TGLRSLRLEENPSLRGPIPDQLASGVNCNVRADQPVLEDTEAAMLGSKLDEWFLMPRKA 646
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BLAST of mRNA_A-nodosum_M_contig854.31.3 vs. uniprot
Match: D7FPI3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI3_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 5.060e-15
Identity = 170/280 (60.71%), Postives = 189/280 (67.50%), Query Frame = 0 
Query:  338 VFAALSSSLVFLNLSRNAFQGEMPLGELLPRPG----KEGITNQKEAENSG--SCEETKVALATEMTLSPLSYLNLSRNKLTGHIPEEIGALDSLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGLRSLRLEGNPSLQGPIPGYLASRSECMVSADETVLEDTEARMLGSRLEEWFLVPRKA 611
            V +ALSSSLV+LNL  NAF+G++P+  L P       + G T+   +E  G  S      + A  ++ SPLSYLNL  NK TG + EEIG+L S  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      RLE NPSL+GPIP  LAS   C V AD+ VL+DTEA MLGSRL+EWFL+PRKA
Sbjct:  247 VLSALSSSLVYLNLGHNAFEGDLPVSPLSPHSAGGRVRRGSTSGSPSEGQGRSSRRRRSESAAGVVSASPLSYLNLCHNKFTGRVSEEIGSLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGILEGDDGGGLGRLSSLETLRLDGNTFHGIVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----RLEENPSLRGPIPDQLASGVNCNVRADQPVLDDTEATMLGSRLDEWFLMPRKA 521
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig854.31.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTB3_9PHAE8.110e-2235.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI3_ECTSI5.060e-1560.71Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 269..292
e-value: 190.0
score: 2.8
coord: 480..503
e-value: 12.0
score: 12.6
coord: 317..341
e-value: 0.048
score: 22.8
coord: 173..197
e-value: 67.0
score: 6.5
coord: 221..244
e-value: 80.0
score: 5.9
coord: 423..447
e-value: 2.5
score: 17.1
coord: 293..316
e-value: 130.0
score: 4.0
coord: 399..422
e-value: 360.0
score: 0.5
coord: 504..528
e-value: 84.0
score: 5.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 271..330
e-value: 1.4E-10
score: 40.8
coord: 152..210
e-value: 9.5E-7
score: 28.5
coord: 483..541
e-value: 6.3E-7
score: 29.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 313..366
e-value: 1.3E-8
score: 36.8
coord: 248..312
e-value: 2.2E-19
score: 71.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 383..599
e-value: 4.1E-47
score: 162.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 74..247
e-value: 3.9E-39
score: 136.0
NoneNo IPR availablePANTHERPTHR48056LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATEDcoord: 402..576
coord: 128..361
coord: 126..252
coord: 227..462
NoneNo IPR availablePANTHERPTHR48056:SF34LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATEDcoord: 402..576
coord: 128..361
coord: 126..252
coord: 227..462
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 122..463
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 399..575

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig854contigA-nodosum_M_contig854:244243..261541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig854.31.3mRNA_A-nodosum_M_contig854.31.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig854 244243..261974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig854.31.3 ID=prot_A-nodosum_M_contig854.31.3|Name=mRNA_A-nodosum_M_contig854.31.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=859bp
MGVASSLNHDELKALDVQGLTNLVYEAGLPQHCQACLDFGIDGDMVIKLS
RDQLDEILRRAGIDSDDEIELQLQTLDKIKSSTIDGNKLDRDRLKELLWH
YDGDFKEWDGSPETFDWDGISVELDKRITAIHISNRNFYGEIPPDLGDLA
HLEQFHASCNRFTGDIPATLGGLSRLTSLRLDHNYLSGKLPSSLTQLANL
TVLDMALNRISGTIPTKLGRMASLRRLNLGMNKLTGVIPKQLESLVFLVE
LRMPENKLEGKIPPQLGNLSSLRTLDLTSNILQGCIPASFGSLTDLRELW
LSDNNLLGGIPETWDKLTNLQSLDMSSNELASRLPRRVFAALSSSLVFLN
LSRNAFQGEMPLGELLPRPGKEGITNQKEAENSGSCEETKVALATEMTLS
PLSYLNLSRNKLTGHIPEEIGALDSLTTLDLWHNKLSGQLPPGIGGCSAL
RTLSLSQCCLTGVLDGSDEGSEGPWGLGMLTLLETLRLDGNEFEGSVPTA
FGGLTCLKVLQLQGNEFRGCLPSSLGQLGQLWALVVRDNRLSGRVPESLS
RLTGLRSLRLEGNPSLQGPIPGYLASRSECMVSADETVLEDTEARMLGSR
LEEWFLVPRKAFHNLSEFPGHVSIRPSLVRCVSTVVAYECHVFVDAKGKR
LVVRRSEIAFFSHCWNLRRYQCPSSPALLEGPHSDSSDRAKLRHMKACLG
DAPSGIQYVWLDMLCVPLADPERRRASGRSVPFFVQNSARLYFLGADAAG
IERLKTRAWCRLEALCAACPLQPCNTLSAFSPKPRHDSPDVRFTYDSVEC
FSSTWENDARVQERVGGIEGLASAGFIQNPATGKVSDQNDRQDVAEATLA
AVDVMDLAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf