prot_A-nodosum_M_contig854.25.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig854.25.1
Unique Nameprot_A-nodosum_M_contig854.25.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1178
Homology
BLAST of mRNA_A-nodosum_M_contig854.25.1 vs. uniprot
Match: A0A6H5KYE5_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYE5_9PHAE)

HSP 1 Score: 430 bits (1106), Expect = 4.970e-127
Identity = 377/814 (46.31%), Postives = 441/814 (54.18%), Query Frame = 0
Query:    1 MADWAAAAAAWAKSGEGEKHAFIPPQPSPXXXXXXXXXXXXXXXXXQQHTQGWGAVDKGXXXGDMSSHEQMWM-----SHQAISHSH-GHQ--GFGPIAAGSDPMAMMGHQGPATGAPYGHGGPPLPPPXXIXXXXXXXXPSNI-DQGQYFHGQGWAGGXXXXXXXXXXVQSQPDQA------------LRGHMGAQSQMLDQASTYMGNHMDSQMGGMGGQMGQMAGGQQQQQPP---QSLGGYR--PYPDSSHAGA-GETMPSIGGLGHGIEGPGASGSVGAVNGGMMGGLMGNVGGFPSASAPS---QRSSKKVPDWLVQTLKQQEALEAKQKKKEGISLSTDVASSTLAGAGNISGYNLVHSPSPSPPGSPSDRGGESGEGRTKPSWQNDS--DDSADEMSPKKLKEAK-----SAANGSVDGGDRND-AKPSGILKKSSGPTPRGMGRVLEDDDVEDDTVTEAASA--TMDEATRASFDREIMRLLTRLFKECTDNIIREVASSTIEEARDSATAATEAARRAAEPQPPKMNRKQQREQ---KRAIGALIGGYDSESASESDGDVSSPQTAVTSATISGKATASAEVEGRGPPPIAAPDTTSSQIAARKPKLLVGGKWPLPPWADPPHETPVPDGLSIVVETIGPNLEKVKTQELSYSTTVLGRFEEQCGFVVEDSSASRCHAAILVDTERNVHVVDIFSANGTTVNGRKMQPGVLQSLSSGGVLTLGTRNQSFRVIVRSSA--RQEQPA--LASASATSVSAAGSNGPTLDKMKDRSPAVSSPPPKHNQDLVALAATIAARINSQPSA 767
            MADWAAAAAAWA+SGEGEK  F+P            XXXXXXXXXX      WG  D+          +Q+WM      H A++ +H GHQ   FG +  GSDPMA  GHQG        H  PPLPPP  + XX      SN+ +QGQ+FH QGWA     XXXXXXX   QP                                         MGG    M +M G            ++  Y+  P  ++ H  A    M  +GG                              G    + P+   QR +KKVPDWLVQTLK++E L  KQKKK+G SLSTDVA++  +GAGNISGYNLVHSPSPSPP SPS R       RTKPSWQ D   DDSADE S K+    K     SAA+GS   G RND AKPSGILKK  G   RG    L+ +   DD   EA +A   MD+ TRASFDREI RLLT L K  T NIIREVASS +EEA+DS                              K+A+GALIGGY SES                                  P               ++  + VGGKWPLP WADPPHE P+P+GLSIVVETIGP+LE+VKTQELS+STTV+GRFEEQCGFVVED+SASRCHAAIL  + ++V VVDIFSANGT VNG+K+QPGVL +LS+GGVLTLGTRNQSFRVIVRS+   R+E P    ASA+ TS S AG +         + P VS  PPK  QDLVALAATIAARIN++ +A
Sbjct:    1 MADWAAAAAAWAQSGEGEKTQFVP------------XXXXXXXXXXXXXXGAWGGADQ----------QQLWMPPHQMDHAAVASAHQGHQQHSFGSLPGGSDPMAGGGHQGFGQEG-VSHTAPPLPPPPSMQXXFPPAASSNVNEQGQFFHEQGWAAAGGYXXXXXXXXXGQPXAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGPMAPMSEMGGXXXXXXXXXXXHAMEAYQGSPVGNALHPAAMASPMTGMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAFLAGPAPVPQRPAKKVPDWLVQTLKEKEKLAEKQKKKKGASLSTDVAAALSSGAGNISGYNLVHSPSPSPPDSPSAR-------RTKPSWQEDDSDDDSADETSFKRENRDKRASNGSAADGSAGAGTRNDSAKPSGILKKG-GTKQRGAEGGLDRNG--DDATAEADTAPLVMDDETRASFDREIRRLLTHLLKVGTANIIREVASSALEEAQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAVGALIGGYGSESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPP------------AVEKRAHVKVGGKWPLPSWADPPHEAPLPEGLSIVVETIGPDLERVKTQELSFSTTVMGRFEEQCGFVVEDASASRCHAAILA-SGKDVFVVDIFSANGTAVNGKKIQPGVLHALSAGGVLTLGTRNQSFRVIVRSTPPPRREDPRSPTASANVTSPSPAGGSA--------QPPKVSDTPPKFKQDLVALAATIAARINTKSTA 760          
BLAST of mRNA_A-nodosum_M_contig854.25.1 vs. uniprot
Match: D7FPI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI9_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 3.850e-81
Identity = 202/386 (52.33%), Postives = 229/386 (59.33%), Query Frame = 0
Query:  277 SAPSQRSSKKVPDWLVQTLKQQEALEAKQKKKEGISLSTDVASSTLAGAGNISGYNLVHSPSPSPPGSPSDRGGESGEGRTKPSWQNDSDDSAD--EMSPKKLKEAKSAANGSVDGGD-----RN-DAKPSGILKKSSGPTPRGMGRVLEDDDVEDDTVTEAASA--TMDEATRASFDREIMRLLTRLFKECTDNIIREVASSTIEEARDSATAATEAARRAAEPQPPKMNRKQQREQ-KRAIGALIGGYDSESASESDGDVSSPQTAVTSATISGKATASAEVEGRGPPPIAAPDTTSSQIAARKPKLLVGGKWPLPPWADPPHETPVPDGLSIVVETIGPNLEKVKTQELSYSTTVLGRFEEQCGFVVEDSSASRCHAAILVDT 651
            +A  QR +KKVPDWLVQTLK++E L  KQKKKEG SLSTDVA++  +GAGNISGYNLVHSPSPSPP SPS R       RTKPSWQ D  D     E SPK+    K A+NGS          RN  AKPSGILKK  G   RG    L+ +   DD   EA +A   MD+ TRASFDREI RLLT L K  T NIIREVASS +EEA+DS                            K+A+GALIGGY SES                                  P               ++  + VGGKWPLP WADPPHE P+P+GLSIVVETIGP+LE+VKTQELS+STTV+GRFEEQCGFVVED+SASRCHAAIL  T
Sbjct:   49 AAVPQRPAKKVPDWLVQTLKEKEKLAEKQKKKEGASLSTDVATALSSGAGNISGYNLVHSPSPSPPDSPSAR-------RTKPSWQEDDSDDXXXXEASPKRANRDKRASNGSXXXXXXXXXTRNGSAKPSGILKKG-GTKQRGAVGGLDRNG--DDATAEADTAPLVMDDETRASFDREIRRLLTHLLKVGTANIIREVASSALEEAQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAVGALIGGYGSESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPP------------AVEKRAHVKVGGKWPLPSWADPPHEAPIPEGLSIVVETIGPDLERVKTQELSFSTTVMGRFEEQCGFVVEDASASRCHAAILSPT 412          
BLAST of mRNA_A-nodosum_M_contig854.25.1 vs. uniprot
Match: A0A7S1CHD3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHD3_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.930e-6
Identity = 40/118 (33.90%), Postives = 62/118 (52.54%), Query Frame = 0
Query:  583 PPWADPPHETPVPDGLSIVVETIGPNLEKVKTQELSYSTTVLGRFEEQCGFVVEDSSASRCHAAILVDTERNVHVVDIFSANGTTVNGRKMQPGVLQSLSSGGVLTLGTRNQSFRVIV 700
            P WA PP        L + V   G  ++ ++    + + TVLGR   Q   ++E +S SR HAAIL D++    VVD+ S+NGT +NG+++ P     L+ G VL      + F V++
Sbjct:   26 PSWAAPPSGAA--RSLRLRVSADGHVVDSIQLG--TRAATVLGRNRAQADLLLEHTSLSRRHAAILHDSDGRSFVVDLGSSNGTRLNGKRLPPHERHELAPGDVLEFAELRRRFEVLM 139          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig854.25.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KYE5_9PHAE4.970e-12746.31FHA domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FPI9_ECTSI3.850e-8152.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1CHD3_9STRA1.930e-633.90Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..51
NoneNo IPR availableGENE3D2.60.200.20coord: 599..712
e-value: 7.5E-18
score: 66.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..1177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..571
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1057..1085
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..434
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..543
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 802..837
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 856..948
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 978..1017
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1092..1167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..725
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..164
IPR000253Forkhead-associated (FHA) domainSMARTSM00240FHA_2coord: 621..673
e-value: 4.6E-6
score: 36.1
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 623..690
e-value: 1.3E-12
score: 47.9
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 622..673
score: 13.619399
IPR000253Forkhead-associated (FHA) domainCDDcd00060FHAcoord: 620..700
e-value: 2.28384E-15
score: 70.8782
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 610..699

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig854contigA-nodosum_M_contig854:192048..200866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig854.25.1mRNA_A-nodosum_M_contig854.25.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig854 192048..201135 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig854.25.1 ID=prot_A-nodosum_M_contig854.25.1|Name=mRNA_A-nodosum_M_contig854.25.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1178bp
MADWAAAAAAWAKSGEGEKHAFIPPQPSPRNNQQQQEQQQQQQQLQQQHT
QGWGAVDKGWGAGDMSSHEQMWMSHQAISHSHGHQGFGPIAAGSDPMAMM
GHQGPATGAPYGHGGPPLPPPPPIQPPLPSSPPSNIDQGQYFHGQGWAGG
GYPPPPPPPPVQSQPDQALRGHMGAQSQMLDQASTYMGNHMDSQMGGMGG
QMGQMAGGQQQQQPPQSLGGYRPYPDSSHAGAGETMPSIGGLGHGIEGPG
ASGSVGAVNGGMMGGLMGNVGGFPSASAPSQRSSKKVPDWLVQTLKQQEA
LEAKQKKKEGISLSTDVASSTLAGAGNISGYNLVHSPSPSPPGSPSDRGG
ESGEGRTKPSWQNDSDDSADEMSPKKLKEAKSAANGSVDGGDRNDAKPSG
ILKKSSGPTPRGMGRVLEDDDVEDDTVTEAASATMDEATRASFDREIMRL
LTRLFKECTDNIIREVASSTIEEARDSATAATEAARRAAEPQPPKMNRKQ
QREQKRAIGALIGGYDSESASESDGDVSSPQTAVTSATISGKATASAEVE
GRGPPPIAAPDTTSSQIAARKPKLLVGGKWPLPPWADPPHETPVPDGLSI
VVETIGPNLEKVKTQELSYSTTVLGRFEEQCGFVVEDSSASRCHAAILVD
TERNVHVVDIFSANGTTVNGRKMQPGVLQSLSSGGVLTLGTRNQSFRVIV
RSSARQEQPALASASATSVSAAGSNGPTLDKMKDRSPAVSSPPPKHNQDL
VALAATIAARINSQPSAPEKAEAALESNTNEGKNKANTNSVKRKTKAKTK
SKRSSSYSSSSSSSSSSSSSSSSSSSSSSQSRSQSLSGSYDRRRRRSRNR
KGNRSRSRGRVTETSRKRNHSEALSSRSRSRSKSDSHSQSRLKGRTSARG
EKGWRRSRSASRVLDQRDKDRTSGAKDGDGRRSRGADRRREKSNSPSRSP
SRHHRRISSTHKDREIVRGKRRGRGRSKSPSVTRDRSSRNDKKSKESTSE
RGKERRGDRENDGSRTKSHNRVASSASSADSKRPKEPRSTTDRSNKSNGA
AGSSKDKRQSDAGKAKGSGDKVSKVKKKSDASSATESKKGDVGAVGAKKA
GKRSKDDKKGRKKSESDDDTRNRSRNNGRKENMRETRRHRSTSRSSLTER
AGDKRRSASPRDKRRDRGRSSSKGRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000253FHA_dom
IPR008984SMAD_FHA_dom_sf