prot_A-nodosum_M_contig854.19.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig854.19.3
Unique Nameprot_A-nodosum_M_contig854.19.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length139
Homology
BLAST of mRNA_A-nodosum_M_contig854.19.3 vs. uniprot
Match: D7FPJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ0_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 9.570e-46
Identity = 79/99 (79.80%), Postives = 91/99 (91.92%), Query Frame = 0
Query:   41 GFLSGMASTMAQGFAFGSGSAVAHRAVGAVMGGGGSSS-AEHAEQPSAQSNQQPQIDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKRSYN 138
            G L+GMASTMAQGFAFG+GS++AHRAVGAVMGGGGSS+  E A++ + Q+ QQP +DPCD+DKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAK+SYN
Sbjct:   38 GMLAGMASTMAQGFAFGTGSSIAHRAVGAVMGGGGSSAPVEQAQEQAPQAYQQPPVDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKKSYN 136          
BLAST of mRNA_A-nodosum_M_contig854.19.3 vs. uniprot
Match: A0A4D9CYI4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYI4_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.690e-20
Identity = 74/148 (50.00%), Postives = 87/148 (58.78%), Query Frame = 0
Query:    1 MPRSRRSAPARXXXXXXXXXXPAPRPAAK----PPAXXXXXXXXGFLSGMASTMAQGFAFGSGSAVAHRAVGAVMGG-GGSSSAEH-----AEQPSAQSNQ----QPQIDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAK 134
            M RSR S PA    XXXXXX P+  PAA     PPA        G +SG AST+AQGFAFG+GSAVAHRAVGA  G   G S A H     A+QP+ Q       Q    PC +D QNF  CLQ N  +V AC F++E+LQ CQ +A+
Sbjct:    1 MARSRSSRPAPARAXXXXXXRPSSVPAAPQRSAPPAPHQPQQGGGMMSGFASTIAQGFAFGTGSAVAHRAVGAAAGAFSGDSEAPHQQEAYAQQPAHQQQYAAPAQGGQGPCALDGQNFQACLQANPGNVDACTFLYESLQQCQRQAQ 148          
BLAST of mRNA_A-nodosum_M_contig854.19.3 vs. uniprot
Match: A0A836CNH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH7_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.260e-19
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 0
Query:   43 LSGMASTMAQGFAFGSGSAVAHRAVGAVMGGGGSSSAEHAEQ--PSA-----QSNQQPQIDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            LSGMAST+AQGFAFG+GSA+AHRAVGAV G  G S +E A+Q  P+A     Q NQQ     CD DKQNF +CLQ  N +  +CQF++E+LQ+CQ
Sbjct: 2052 LSGMASTVAQGFAFGTGSAMAHRAVGAVAGSFGGSGSEAAQQQEPAAGVSGGQYNQQSAAMACDNDKQNFFKCLQEQNGNAASCQFLYESLQSCQ 2146          
BLAST of mRNA_A-nodosum_M_contig854.19.3 vs. uniprot
Match: A0A7S2CIA8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIA8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 7.460e-19
Identity = 51/98 (52.04%), Postives = 69/98 (70.41%), Query Frame = 0
Query:   41 GFLSGMASTMAQGFAFGSGSAVAHRAVGAVMGGGGSSSAEHAEQPS-AQSNQQPQ--IDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKR 135
            G +SG+  T+AQG AFG+GSA+AHRAVGAV    GS    + EQP+ AQ++QQPQ  I  C+ D++NF  CLQ+N+ DV +C   F+ LQ CQ +AK+
Sbjct:   62 GMMSGLMGTVAQGMAFGTGSAIAHRAVGAVA---GSMMGGNEEQPAVAQASQQPQSSIQSCEYDQKNFYDCLQSNHGDVNSCDMYFQQLQACQAQAKQ 156          
BLAST of mRNA_A-nodosum_M_contig854.19.3 vs. uniprot
Match: A0A7S2PCQ3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCQ3_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 9.470e-19
Identity = 59/114 (51.75%), Postives = 73/114 (64.04%), Query Frame = 0
Query:   22 PAPRPAAKPPAXXXXXXXXGFLSGMASTMAQGFAFGSGSAVAHRAVGAVMG--GGGSSSAEHAEQPSAQSN--QQPQI-DPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            PA RPA+ P A        G +SG+AST+AQG AFG+GSA+AHRAVGAV G  GG    AE   Q S Q    QQP +   C  DKQ F +CLQ N  D ++CQF+++AL+TCQ
Sbjct:   18 PARRPASTP-APAQQSSGGGMMSGLASTVAQGMAFGTGSAIAHRAVGAVAGSFGGSGGDAEIPAQTSQQMGYEQQPTLASACADDKQMFYECLQMNKGDQSSCQFLYDALKTCQ 130          
BLAST of mRNA_A-nodosum_M_contig854.19.3 vs. uniprot
Match: A0A7S1UZU7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZU7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.200e-17
Identity = 58/126 (46.03%), Postives = 71/126 (56.35%), Query Frame = 0
Query:   22 PAPRPAAKPPAXXXXXXXXGFLSGMASTMAQGFAFGSGSAVAHRAVGAVMGG--GGSSSAEHA------EQPSAQSNQQPQIDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQM-EAKRSYN 138
            PA +P A PPA        G LSG+ ST+AQG AFG+GSA+AHRAVGAV GG  GG    E A      +  +  S  Q     C  DKQ F +CLQ N  D  +C F+++ LQTCQ  E   S+N
Sbjct:    6 PAQKPKAAPPAVPQQSSGGGLLSGIGSTIAQGMAFGTGSAIAHRAVGAVAGGLSGGGEGGEAAPVEQYGDSLNPGSPTQQLSGACAGDKQMFFECLQVNKGDQQSCSFLYDQLQTCQRNETSMSFN 131          
BLAST of mRNA_A-nodosum_M_contig854.19.3 vs. uniprot
Match: A0A7S1XNA6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNA6_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.780e-17
Identity = 56/119 (47.06%), Postives = 69/119 (57.98%), Query Frame = 0
Query:   23 APRPAAKPPAXXXXXXXXGFLSGMASTMAQGFAFGSGSAVAHRAVGAVMGGGGSSSAEHAEQPSAQSNQQPQI-----------DPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            A RP A+ PA        G +SG+  T+AQGFAFG+GSAVAHRAVGAV     S S    + P+A   QQPQ            + C +D+QNF QCL  NN +  ACQF F++LQ CQ
Sbjct:   41 AARPQAQVPAQPQQQSG-GMMSGLLGTVAQGFAFGTGSAVAHRAVGAVA---NSFSGSGEQAPAAGMEQQPQFQQQAPIQQVSQNACSVDQQNFMQCLTENNGNAQACQFFFDSLQQCQ 155          
BLAST of mRNA_A-nodosum_M_contig854.19.3 vs. uniprot
Match: H3G8I8_PHYRM (CHCH domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3G8I8_PHYRM)

HSP 1 Score: 82.8 bits (203), Expect = 2.070e-17
Identity = 46/103 (44.66%), Postives = 69/103 (66.99%), Query Frame = 0
Query:   41 GFLSGMASTMAQGFAFGSGSAVAHRAVGAVMG---GGGSSSAEHAEQPSAQSNQQ---PQIDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKRSY 137
            G +SG+  T+AQG AFG+GSA+AHRAVGAV G   GG  +  E    P+AQ +Q    PQ + C  D+++F +CL NN+ND+++CQF  +  + CQM+ + ++
Sbjct:   50 GMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSFSGGSDAPQEQEAAPAAQDHQTAQPPQQNQCGADQKSFLECLNNNSNDISSCQFYLDQFKQCQMQQQSTF 152          
BLAST of mRNA_A-nodosum_M_contig854.19.3 vs. uniprot
Match: A0A421EVM3_9STRA (CHCH domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EVM3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.190e-17
Identity = 46/103 (44.66%), Postives = 69/103 (66.99%), Query Frame = 0
Query:   41 GFLSGMASTMAQGFAFGSGSAVAHRAVGAVMGG--GGSSSAEHAEQPSAQSNQQ----PQIDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKRSY 137
            G +SG+  T+AQG AFG+GSA+AHRAVGAV G   GGS + +  E   AQ + Q    PQ + C  D+++F +CL NN+ND+++CQF  +  + CQ++ + S+
Sbjct:   45 GMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSMSGGSDAPQQQEAAPAQQDYQAAQPPQQNQCGADQKSFLECLNNNSNDISSCQFYLDQFKQCQLQQQSSF 147          
BLAST of mRNA_A-nodosum_M_contig854.19.3 vs. uniprot
Match: A0A7S1E0N2_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E0N2_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.030e-16
Identity = 53/96 (55.21%), Postives = 64/96 (66.67%), Query Frame = 0
Query:   41 GFLSGMASTMAQGFAFGSGSAVAHRAVGAVMG---GGGSSSAE---HAEQPSAQSNQQPQIDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            G LSG+ ST+AQG AFG+GSA+AH+AVGAV G   GGG++ AE   +  QP AQ  QQP    C  DKQ F +CLQ N  D  AC F++E LQ CQ
Sbjct:   45 GMLSGIGSTIAQGMAFGTGSAIAHQAVGAVAGSLSGGGAAPAEQQYNETQPMAQ-QQQPIQGSCAQDKQMFFECLQVNKGDQQACSFLYENLQACQ 139          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig854.19.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPJ0_ECTSI9.570e-4679.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9CYI4_9STRA7.690e-2050.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836CNH7_9STRA3.260e-1958.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CIA8_9STRA7.460e-1952.04Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2PCQ3_9STRA9.470e-1951.75Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1UZU7_9STRA1.200e-1746.03Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1XNA6_9STRA1.780e-1747.06Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
H3G8I8_PHYRM2.070e-1744.66CHCH domain-containing protein n=12 Tax=Phytophtho... [more]
A0A421EVM3_9STRA7.190e-1744.66CHCH domain-containing protein n=2 Tax=Phytophthor... [more]
A0A7S1E0N2_9STRA1.030e-1655.21Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..107
NoneNo IPR availablePANTHERPTHR13523:SF2COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2, ISOFORM A-RELATEDcoord: 1..133
NoneNo IPR availablePANTHERPTHR13523COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77coord: 1..133
IPR009069Cysteine alpha-hairpin motif superfamilySUPERFAMILY47072Cysteine alpha-hairpin motifcoord: 93..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig854contigA-nodosum_M_contig854:172573..176869 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig854.19.3mRNA_A-nodosum_M_contig854.19.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig854 171483..176951 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig854.19.3 ID=prot_A-nodosum_M_contig854.19.3|Name=mRNA_A-nodosum_M_contig854.19.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=139bp
MPRSRRSAPARKAAPARRSAPPAPRPAAKPPAQQQQSSGGGFLSGMASTM
AQGFAFGSGSAVAHRAVGAVMGGGGSSSAEHAEQPSAQSNQQPQIDPCDM
DKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKRSYN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009069Cys_alpha_HP_mot_SF