prot_A-nodosum_M_contig8533.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8533.1.1
Unique Nameprot_A-nodosum_M_contig8533.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length38
Homology
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BLAST of mRNA_A-nodosum_M_contig8533.1.1 vs. uniprot
Match: A0A6H5L399_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L399_9PHAE)

HSP 1 Score: 47.8 bits (112), Expect = 3.900e-5
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0 
Query:   13 QAFMKGATPRLLHKIPADALSFVTYE 38
            QAF+KGATPRLLHKIPA+A  FV YE
Sbjct:  453 QAFLKGATPRLLHKIPANAFFFVAYE 478
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8533.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L399_9PHAE3.900e-580.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8533contigA-nodosum_M_contig8533:7959..8072 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8533.1.1mRNA_A-nodosum_M_contig8533.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8533 7959..8072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8533.1.1 ID=prot_A-nodosum_M_contig8533.1.1|Name=mRNA_A-nodosum_M_contig8533.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=38bp
HVRKDTHAFHVLQAFMKGATPRLLHKIPADALSFVTYE
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