prot_A-nodosum_M_contig852.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig852.10.1
Unique Nameprot_A-nodosum_M_contig852.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length48
Homology
BLAST of mRNA_A-nodosum_M_contig852.10.1 vs. uniprot
Match: A0A482UKD1_9ARCH (UBC core domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UKD1_9ARCH)

HSP 1 Score: 91.3 bits (225), Expect = 3.260e-23
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0
Query:    1 KVLLSICSLLTDPNPDDPLVPEIAQVFKNNRTQHDATAREWCAKYAM 47
            +VLLSICSLLTD NPDDPLVPEIAQ++KNNRTQHDATAREW AKYAM
Sbjct:   23 QVLLSICSLLTDANPDDPLVPEIAQLYKNNRTQHDATAREWTAKYAM 69          
BLAST of mRNA_A-nodosum_M_contig852.10.1 vs. uniprot
Match: A0A835ZQ60_9STRA (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ60_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 7.710e-22
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 0
Query:    1 KVLLSICSLLTDPNPDDPLVPEIAQVFKNNRTQHDATAREWCAKYAM 47
            KVLLSICSLLTDPNPDDPLVPEIAQ  K+NRT HDATAREW AKYAM
Sbjct:  101 KVLLSICSLLTDPNPDDPLVPEIAQALKSNRTTHDATAREWTAKYAM 147          
BLAST of mRNA_A-nodosum_M_contig852.10.1 vs. uniprot
Match: A0A7S3H562_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H562_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.550e-21
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 0
Query:    1 KVLLSICSLLTDPNPDDPLVPEIAQVFKNNRTQHDATAREWCAKYAM 47
            KVLLSICSLLTD NP+DPLVPEIAQ++KNNRTQHDATAREW AK+AM
Sbjct:  101 KVLLSICSLLTDANPEDPLVPEIAQMYKNNRTQHDATAREWTAKHAM 147          
BLAST of mRNA_A-nodosum_M_contig852.10.1 vs. uniprot
Match: A0A7S2BUY0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BUY0_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.250e-20
Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    1 KVLLSICSLLTDPNPDDPLVPEIAQVFKNNRTQHDATAREWCAKYAM 47
            KVLLSICSLLTDPNPDDPLVPEIAQ+++N++T+HD  AREW AKYAM
Sbjct:  101 KVLLSICSLLTDPNPDDPLVPEIAQIYRNDKTRHDQVAREWTAKYAM 147          
BLAST of mRNA_A-nodosum_M_contig852.10.1 vs. uniprot
Match: A0A7S0LRQ9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LRQ9_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 1.010e-19
Identity = 37/47 (78.72%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    1 KVLLSICSLLTDPNPDDPLVPEIAQVFKNNRTQHDATAREWCAKYAM 47
            KVLLS+CSLLTDPNPDDPLVPEIA+++K+NR QHD+TA+EW  KYAM
Sbjct:  130 KVLLSVCSLLTDPNPDDPLVPEIARMYKSNRVQHDSTAKEWTNKYAM 176          
BLAST of mRNA_A-nodosum_M_contig852.10.1 vs. uniprot
Match: I1MML3_SOYBN (UBC core domain-containing protein n=14 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1MML3_SOYBN)

HSP 1 Score: 84.3 bits (207), Expect = 1.470e-19
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 0
Query:    1 KVLLSICSLLTDPNPDDPLVPEIAQVFKNNRTQHDATAREWCAKYAM 47
            KVLLSICSLLTDPNPDDPLVPEIAQ++K NRT+++ATAR W  KYAM
Sbjct:  101 KVLLSICSLLTDPNPDDPLVPEIAQMYKTNRTKYEATARSWTEKYAM 147          
BLAST of mRNA_A-nodosum_M_contig852.10.1 vs. uniprot
Match: B8C0C0_THAPS (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=19 Tax=Ochrophyta TaxID=2696291 RepID=B8C0C0_THAPS)

HSP 1 Score: 83.6 bits (205), Expect = 2.870e-19
Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0
Query:    1 KVLLSICSLLTDPNPDDPLVPEIAQVFKNNRTQHDATAREWCAKYAM 47
            KVLLSICSLLTDPNPDDPLVP+IAQ+ K +R +HD+TAREW +KYAM
Sbjct:  101 KVLLSICSLLTDPNPDDPLVPDIAQLLKTDRARHDSTAREWTSKYAM 147          
BLAST of mRNA_A-nodosum_M_contig852.10.1 vs. uniprot
Match: A0A7S3W3N7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W3N7_9SPIT)

HSP 1 Score: 83.6 bits (205), Expect = 3.250e-19
Identity = 36/47 (76.60%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    1 KVLLSICSLLTDPNPDDPLVPEIAQVFKNNRTQHDATAREWCAKYAM 47
            KVLLS+CSLLTDPNPDDPLVPEIA+++K++R +HDATA+EW  KYAM
Sbjct:   74 KVLLSVCSLLTDPNPDDPLVPEIAKLYKSDRAKHDATAKEWTRKYAM 120          
BLAST of mRNA_A-nodosum_M_contig852.10.1 vs. uniprot
Match: A0A328ACP7_9CAUL (Ubiquitin-conjugating enzyme E2 (Fragment) n=1 Tax=Phenylobacterium hankyongense TaxID=1813876 RepID=A0A328ACP7_9CAUL)

HSP 1 Score: 81.3 bits (199), Expect = 3.740e-19
Identity = 36/47 (76.60%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    1 KVLLSICSLLTDPNPDDPLVPEIAQVFKNNRTQHDATAREWCAKYAM 47
            KVLLSICSLLTDPNPDDPLVPEIA ++K +RT+++ATAR W  KYAM
Sbjct:   30 KVLLSICSLLTDPNPDDPLVPEIAHIYKTDRTKYEATARSWTQKYAM 76          
BLAST of mRNA_A-nodosum_M_contig852.10.1 vs. uniprot
Match: A0A7S4C240_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C240_CHRCT)

HSP 1 Score: 83.6 bits (205), Expect = 4.130e-19
Identity = 36/47 (76.60%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    1 KVLLSICSLLTDPNPDDPLVPEIAQVFKNNRTQHDATAREWCAKYAM 47
            KVLLS+CSLLTDPNPDDPLVPEIA+++K++R +HDATA+EW  KYAM
Sbjct:  116 KVLLSVCSLLTDPNPDDPLVPEIAKLYKSDRAKHDATAKEWTRKYAM 162          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig852.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482UKD1_9ARCH3.260e-2389.36UBC core domain-containing protein n=1 Tax=archaeo... [more]
A0A835ZQ60_9STRA7.710e-2289.36Ubiquitin-conjugating enzyme e2-16kda, ubiquitin p... [more]
A0A7S3H562_9STRA1.550e-2187.23Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2BUY0_9STRA1.250e-2080.85Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0LRQ9_9EUKA1.010e-1978.72Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
I1MML3_SOYBN1.470e-1980.85UBC core domain-containing protein n=14 Tax=Glycin... [more]
B8C0C0_THAPS2.870e-1978.72Ubiquitin-conjugating enzyme e2-16kda, ubiquitin p... [more]
A0A7S3W3N7_9SPIT3.250e-1976.60Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A328ACP7_9CAUL3.740e-1976.60Ubiquitin-conjugating enzyme E2 (Fragment) n=1 Tax... [more]
A0A7S4C240_CHRCT4.130e-1976.60Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 1..41
e-value: 1.3E-7
score: 31.4
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..47
score: 16.650604
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..47
e-value: 1.8E-15
score: 58.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..47
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 1..47
NoneNo IPR availablePANTHERPTHR24068:SF231UBIQUITIN CARRIER PROTEINcoord: 1..47
NoneNo IPR availablePANTHERPTHR24068:SF339UBIQUITIN-CONJUGATING ENZYME E2 10coord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig852contigA-nodosum_M_contig852:118621..119426 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig852.10.1mRNA_A-nodosum_M_contig852.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig852 118621..119426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig852.10.1 ID=prot_A-nodosum_M_contig852.10.1|Name=mRNA_A-nodosum_M_contig852.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=48bp
KVLLSICSLLTDPNPDDPLVPEIAQVFKNNRTQHDATAREWCAKYAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD