prot_A-nodosum_M_contig85.6.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig85.6.1
Unique Nameprot_A-nodosum_M_contig85.6.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1243
Homology
BLAST of mRNA_A-nodosum_M_contig85.6.1 vs. uniprot
Match: A0A6H5KBR4_9PHAE (Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR4_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 7.480e-74
Identity = 425/1333 (31.88%), Postives = 522/1333 (39.16%), Query Frame = 0
Query:   75 APMFNGFGGVGGFFNAAAFAAAAAAAFPN--------AGVTSKSLGKDNNSWLGLASKPGGXXXXXXXXTSQSTSAIKRRKRCRAEESSSD----------VKPREASPMAGGVAPQPASLLLSKVEAVCPQQSHAITPAEGISSAASAVAGAASGGGTDTSMAWANGMMNVLAPNPFEGEISTQERKERRKIRNRMSAQQHRERQRQRVDALEDCLRQRDAEITKLKDGVSSLKAKNECLTARVLQLEVEAGELPALREVLEGLGDEIAPFSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGYAGNVDATT----------NGSAGDDTDSGSGVTTDPAQSSS-ETESEDFSPISTLDSRFGQPSTPPLSPDR-----------SGSSHGVQDEKYMEDTPAEFSRN---------------------FEMQGCEPYVAAASASPASYSTFVFGTLKTEPEKERCTIDRAAIEIVDPGVGTERGRGPSTPPSRANTLSS----------GAAAASAQVDVGGEG-------AFTVDVDDVNGMDEPDDGEGVLDSIGMEIFGDF-----------GIGTNNAMEDELTMAALDPMEIDALLASSDTTAATVGDGSAYPRG------GNTLYSCRDR--EAVSGGENGAGEAPIPPGWADVLAGDLEQGSSSLPLAGVAAAADDDVAAEFHGSVTPERQPPRNLGESGGATPTGAAAGAGNNDRCIESLSESVAARSSEGVADVSSKRRNDGGRTGASEKRRKEGEVSRGGLTSTVAAGVMGALCLAGVVMNSGT--PDVGVCVQKYFLPIYKCSPPGTDVVSLSPHAGAAGRRALMSSEDDEENDYANVTEPLGTSWVLHPMEAEPWRWRARVAREGRAPWVWDQTLNLFND--FRDHNPGFSKEPGGSLGSGGLILSDDIVDIDDFLKVTTTPRSACFWVYQPIAPPADIEAVADE-----------AAAPTPSEISSEVSGKELDLYPAYAVASPFHRGGFEEDGRGGGARAGVDGGRGPDL-----------------------------------------GRRSSYIFCPQAHGMMSGAMIEHATKAAYDYHHPGAARPCPRAAGNRRGGGGAGSGDREVRCTLFAQVEIGLFPHARPEQKRLLFSHGDVDTPPHXXXXXXXXXXXQDSGGSLALVSSFRPR-------PIVFGSETGTGGIPSRSSSGDGWR-RRQTPAPIQYTEDLEGGGRAGGTGREGFR-----QVPRRSEDAQFVTMLVPSGSLDWGPSSLAVQSALNATGSSSSTASETMG-----SWVEIECQILNARIVQ 1236
            A M + FG   G FNAAAFAAAAAAAFP         A V + +    + + L LA K            +    + KRRKR R E+  +           VK  E    AGG  P           ++      AI+P    S  A+ + G A   GT          ++VLAP+ F G++STQERKERRKIRNRMSAQQHRERQRQRVD LEDCLR RD EI KL+  V+SL  +N+ L  RVLQLE   GE                     XXXXXXXXXXXXXXXXXXXXXXX          A   A                  G A D +D+G   T D A SSS E++S+D SP+STLD     P+TPPLSP             S ++ G+     + D   EFS +                       M G E           S+ST        +       +  AA      GVG         PP  A TLS+           A AA AQ   GG G       +F        G    D  EG++       FGD            G+G  +  EDELTMAALDPMEIDALLA         GDG    R       GN          E  +G   GA E                 G                                                                                                        STVAAGV+GALCL GV +NSGT  P  G    +  +P +K SPP      ++                 E+ +YAN TEP    WV HP+EAEPWRWRA  ARE R PWVW++ LNLF +  F D +P    + G    + G+           + K T  P       Y PIAPP  I    DE                       +SGKELDL+        ++R    +    GG     +G  G                                              R+SY+FCP+A+GMMSG MIE A+KA YDYHHPGA RPCP  AG    GG    GD E       +V++ +   AR E+ RLL +       P             D+   LALVSS            I FGS    GG        D  R RR+ PAP+ +       G +G T + GF       +   S D++F+TMLVPS SLDWGPS+LAV+++LN T  S              SWVEI+CQIL+AR+VQ
Sbjct:   66 AAMASMFGSFPGMFNAAAFAAAAAAAFPAGAKGLPKLAPVAAATPATGSPAVLCLAPKT-------PAAAAGKPPSSKRRKRGRNEDGDAPETGGATAADAVKLEEVKGGAGGALP---------AGSIAGGGKQAISPQRVASLGAAGMGGVAGXXGTPPPK------ISVLAPSSFGGDMSTQERKERRKIRNRMSAQQHRERQRQRVDTLEDCLRLRDNEIAKLEKQVASLTERNKELAERVLQLESVGGESETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFCCEHAAAAFKLAXXXXXXXXXXXXXXXXKGGGAYDASDAGGVTTEDQAHSSSSESDSDDLSPMSTLDKGSNHPATPPLSPSNATGGGGAMAMASVAAGGIAGSLAVTDELLEFSLSACGATAGTATTGTGGVWTGGDVMMDGEEXXXXXXXPLARSFSTVAAAVAAVDDAGPAAGVGEAAGAXXXAGVGAAA----LPPPRLAETLSAMEFSVPDGVMAADAAQAQPSAGGGGLSASGLLSFEAAAGGSRGGSGADAAEGLVP------FGDHPAAXXXXXXXDGMGCCSE-EDELTMAALDPMEIDALLACVG------GDGEDGVRDPFDTTTGNXXXXXXXSPCELEAGNNTGAQENXXXXXXXXXXXXXXXXGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXSTVAAGVIGALCLVGVALNSGTTPPGGGTGTGRELVPAHKNSPPSV----ITSRXXXXXXXXXXXXXXXEDGEYANATEPQ--PWVFHPVEAEPWRWRATAARERRGPWVWERALNLFENAGFGDDHPRGGNDAGCHEAAVGV-----------YAKRTARPS------YTPIAPPPAISHPLDEDLQQXXXXXXXXXXXXXXXXXXXLSGKELDLF--------YNRNDNVDTSGDGGVAGYANGSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYVAGAGLPSERTSYVFCPEAYGMMSGGMIERASKATYDYHHPGA-RPCP--AGRGGDGGVPEDGDSEFHGGA-GEVKVNVID-ARQERLRLLAADS-----PQVQPHAEDPHAAVDAAEYLALVSSSDANMDVDGGGEIYFGSAGDEGGAAFGEGGNDSNRPRRRGPAPMHHR------GPSGATPQRGFHGGSGDYLQSPSSDSEFLTMLVPSSSLDWGPSTLAVRASLNGTSDSDGXXXXXXXXXXXXSWVEIDCQILSARLVQ 1302          
BLAST of mRNA_A-nodosum_M_contig85.6.1 vs. uniprot
Match: D7FWU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU4_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.690e-28
Identity = 97/247 (39.27%), Postives = 123/247 (49.80%), Query Frame = 0
Query: 1011 MMSGAMIEHATKAAYDYHHPGAARPCPRAAGNRRGGGGAGSGDREVRCTLFAQVEIGLFPHARPEQKRLLFSHGDVDTPPHXXXXXXXXXXXQDSGGSLALVSSFRPRP-------IVFGSETGTGGIPSRSSSGDGWR-RRQTPAPIQYTEDLEGGGRAGGTGREGFRQVPRRSEDAQFVTMLVPSGSLDWGPSSLAVQSALNATGSSSSTASETMG-------SWVEIECQILNARIVQDVNFTS 1242
            MMSG MIE A+KA YDYHHPGA RPCP  AG    GG    GD E       +V++ +     P Q+RL     D    P             D+  +LALVSS            I FGS    GG    +   D  R RR+ PAP+ +           G    G   +   S D++F+TMLVPS +LDWGPS+LAV+++LN T         T G       SWVEI+CQIL+AR+VQDV+F+ 
Sbjct:    1 MMSGGMIERASKATYDYHHPGA-RPCP--AGRGGDGGVPEDGDSEFHGGA-GEVKVNVID---PRQERLRLLAADA---PQVQPHAEDPHAAVDAAEALALVSSSDANMDMDGGGNIYFGSGRDEGGAAFGAGGDDSNRPRRRGPAPMHHRGPSGAASPQRGFHAGGGDYLQSPSSDSEFLTMLVPSSALDWGPSTLAVRASLNGTSDGDGGRGATAGXXXXXXSSWVEIDCQILSARLVQDVSFSD 237          
BLAST of mRNA_A-nodosum_M_contig85.6.1 vs. uniprot
Match: D7FWU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU5_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 9.420e-19
Identity = 61/147 (41.50%), Postives = 77/147 (52.38%), Query Frame = 0
Query:  765 GVMGALCLAGVVMNSGT---PDVGVCVQKYFLPIYKCSPPGTDVVSLSPHAGAAGRRALMSSEDDEENDYANVTEPLGTSWVLHPMEAEPWRWRARVAREGRAPWVWDQTLNLFNDFRDHNPGFSKE-PGGSLGSGGLILSDDIVDI 907
            GVMGALCLAGVV+NSGT   PD G    +  +P ++ SP                          E+ +YAN TE     WV HP+EAEPWRWRA  ARE R PWVW++ LNLF      N GF  + P G + +G     +D+V +
Sbjct:  464 GVMGALCLAGVVLNSGTTTTPDGGTGTGRALVPAHRNSPXXXXXXXXXXXXXXXXXXXXX----XEDGEYANATE--AQPWVFHPVEAEPWRWRATAARERRGPWVWERALNLFG-----NAGFGNDHPRGGIDAG---CHEDVVGV 596          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig85.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KBR4_9PHAE7.480e-7431.88Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWU4_ECTSI1.690e-2839.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWU5_ECTSI9.420e-1941.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 287..307
NoneNo IPR availableGENE3D1.20.5.170coord: 237..311
e-value: 8.9E-6
score: 27.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 728..754
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..431
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 673..756
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1079..1167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1128..1142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..447
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1079..1102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..49
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 239..303
e-value: 1.0E-5
score: 35.0
IPR004827Basic-leucine zipper domainPFAMPF07716bZIP_2coord: 240..292
e-value: 4.2E-5
score: 23.5
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 246..261
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 241..304
score: 9.944142
IPR046347Basic-leucine zipper domain superfamilySUPERFAMILY57959Leucine zipper domaincoord: 243..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig85contigA-nodosum_M_contig85:173999..196237 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig85.6.1mRNA_A-nodosum_M_contig85.6.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig85 172044..196434 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig85.6.1 ID=prot_A-nodosum_M_contig85.6.1|Name=mRNA_A-nodosum_M_contig85.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1243bp
MVASDGLKNIKQEPGTERLPQQQSSKSTAIPLFPKPSLQSTGSSVASSGA
PLSQAAAAAAVAMPSGSVGSGTGNAPMFNGFGGVGGFFNAAAFAAAAAAA
FPNAGVTSKSLGKDNNSWLGLASKPGGLASKPGGSTSQSTSAIKRRKRCR
AEESSSDVKPREASPMAGGVAPQPASLLLSKVEAVCPQQSHAITPAEGIS
SAASAVAGAASGGGTDTSMAWANGMMNVLAPNPFEGEISTQERKERRKIR
NRMSAQQHRERQRQRVDALEDCLRQRDAEITKLKDGVSSLKAKNECLTAR
VLQLEVEAGELPALREVLEGLGDEIAPFSSSSPPPTESPCATPEAAAAAA
AAAAAAAVAAAATSAAGYAGNVDATTNGSAGDDTDSGSGVTTDPAQSSSE
TESEDFSPISTLDSRFGQPSTPPLSPDRSGSSHGVQDEKYMEDTPAEFSR
NFEMQGCEPYVAAASASPASYSTFVFGTLKTEPEKERCTIDRAAIEIVDP
GVGTERGRGPSTPPSRANTLSSGAAAASAQVDVGGEGAFTVDVDDVNGMD
EPDDGEGVLDSIGMEIFGDFGIGTNNAMEDELTMAALDPMEIDALLASSD
TTAATVGDGSAYPRGGNTLYSCRDREAVSGGENGAGEAPIPPGWADVLAG
DLEQGSSSLPLAGVAAAADDDVAAEFHGSVTPERQPPRNLGESGGATPTG
AAAGAGNNDRCIESLSESVAARSSEGVADVSSKRRNDGGRTGASEKRRKE
GEVSRGGLTSTVAAGVMGALCLAGVVMNSGTPDVGVCVQKYFLPIYKCSP
PGTDVVSLSPHAGAAGRRALMSSEDDEENDYANVTEPLGTSWVLHPMEAE
PWRWRARVAREGRAPWVWDQTLNLFNDFRDHNPGFSKEPGGSLGSGGLIL
SDDIVDIDDFLKVTTTPRSACFWVYQPIAPPADIEAVADEAAAPTPSEIS
SEVSGKELDLYPAYAVASPFHRGGFEEDGRGGGARAGVDGGRGPDLGRRS
SYIFCPQAHGMMSGAMIEHATKAAYDYHHPGAARPCPRAAGNRRGGGGAG
SGDREVRCTLFAQVEIGLFPHARPEQKRLLFSHGDVDTPPHHHDDGHQDD
QRQDSGGSLALVSSFRPRPIVFGSETGTGGIPSRSSSGDGWRRRQTPAPI
QYTEDLEGGGRAGGTGREGFRQVPRRSEDAQFVTMLVPSGSLDWGPSSLA
VQSALNATGSSSSTASETMGSWVEIECQILNARIVQDVNFTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR046347bZIP_sf