prot_A-nodosum_M_contig85.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig85.18.1
Unique Nameprot_A-nodosum_M_contig85.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length241
Homology
BLAST of mRNA_A-nodosum_M_contig85.18.1 vs. uniprot
Match: D7FH69_ECTSI (Cathepsin X n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH69_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 1.210e-117
Identity = 158/243 (65.02%), Postives = 192/243 (79.01%), Query Frame = 0
Query:    1 MRDGRGIDIDLSIQVILNCATKVAGSCHGGSHTGTYEYASNNPVPFDTCQLYEAVDNECKPITKCKTCWNFQDKCEAVETYPNATVAEYGTVSGEADMMTEIFARGPIPCEIYAVPLHTYTGGVLDVPEIPSDTDHIVSVAGWGQTKDGVKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWTKLGPTPGPRPP-------------------FHSNGR-GASMNLGAEVLRR 223
            MR G G+DI+LSIQVILNCAT+VAGSCHGG+HTGTYEYASNNPVPFDTCQ Y+A DN C  I KCKTCW+F ++CEAV++YPNATV+EYGTV GE ++M E+FARGP+ C+I A  LH YTGG++D+PE+P++TDH+V++AGWG+T++G+KFWIVRNSWGEYWGEGGWFR+KRG+NQLLLESNC WAVPGSWT+L P P                          S+G  GA MNLGA  L+R
Sbjct:  110 MRGGHGMDINLSIQVILNCATEVAGSCHGGTHTGTYEYASNNPVPFDTCQNYQAEDNTCDAIGKCKTCWSFNEECEAVQSYPNATVSEYGTVVGEENIMAEVFARGPVACDIAASRLHEYTGGIVDIPELPAETDHVVAIAGWGETEEGLKFWIVRNSWGEYWGEGGWFRIKRGDNQLLLESNCGWAVPGSWTELHPRPXXXXXXXXXXXXXXXXXXXXXXXRLRSHGEEGAPMNLGAGTLQR 352          
BLAST of mRNA_A-nodosum_M_contig85.18.1 vs. uniprot
Match: D8LCL2_ECTSI (Cathepsin X n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL2_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 3.260e-116
Identity = 157/206 (76.21%), Postives = 182/206 (88.35%), Query Frame = 0
Query:    1 MRDGRGIDIDLSIQVILNCATKVAGSCHGGSHTGTYEYASNNPVPFDTCQLYEAVDNECKPITKCKTCWNFQDKCEAVETYPNATVAEYGTVSGEADMMTEIFARGPIPCEIYAVPLHTYTGGVLDVPEIPSDTDHIVSVAGWGQTKDGVKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWTKLGPTPGPRPPFH 206
            MRDGRG DI+LS+QVILNCAT++AGSCHGGSHTGTYEYASNNPVPFDTCQ Y+A DN C  I KCKTCWNF ++C AVE++PNATVAEYGTVSGEAD+M E+FARGP+ CEI A PL  YTGGV+D+P++ ++TDHIV++AGWG+T++G KFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWT+L      +PP H
Sbjct:   80 MRDGRGADINLSVQVILNCATELAGSCHGGSHTGTYEYASNNPVPFDTCQQYQASDNTCDAIGKCKTCWNFDEECAAVESFPNATVAEYGTVSGEADIMAEVFARGPVACEIDASPLREYTGGVIDIPDVSAETDHIVAIAGWGETREGDKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWTEL------QPPHH 279          
BLAST of mRNA_A-nodosum_M_contig85.18.1 vs. uniprot
Match: A0A6H5J6W1_9PHAE (Cathepsin X n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6W1_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 2.280e-115
Identity = 147/197 (74.62%), Postives = 176/197 (89.34%), Query Frame = 0
Query:    1 MRDGRGIDIDLSIQVILNCATKVAGSCHGGSHTGTYEYASNNPVPFDTCQLYEAVDNECKPITKCKTCWNFQDKCEAVETYPNATVAEYGTVSGEADMMTEIFARGPIPCEIYAVPLHTYTGGVLDVPEIPSDTDHIVSVAGWGQTKDGVKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWTKLGP 197
            MR G GIDI+LSIQVILNCAT+VAGSC+GG+HTGTYEYASNNPVPFDTCQ Y+A DN C  I KCKTCW+F ++C AV++YPNATVAEYGTV GE ++M E+FARGP+ C+I A  LH YTGG++++PE+P+ TDH+V++AGWG+T++GVKFWIVRNSWGEYWGEGGWFR+KRGENQLLLESNC WAVPGSWT+L P
Sbjct:  100 MRGGHGIDINLSIQVILNCATEVAGSCYGGTHTGTYEYASNNPVPFDTCQNYQAEDNTCDAIGKCKTCWSFDEECAAVQSYPNATVAEYGTVVGEENIMAEVFARGPVACDINASTLHEYTGGIVNIPELPAGTDHVVAIAGWGETEEGVKFWIVRNSWGEYWGEGGWFRIKRGENQLLLESNCGWAVPGSWTELHP 296          
BLAST of mRNA_A-nodosum_M_contig85.18.1 vs. uniprot
Match: A0A835YGR9_9STRA (Cathepsin X n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGR9_9STRA)

HSP 1 Score: 289 bits (739), Expect = 4.160e-94
Identity = 134/235 (57.02%), Postives = 160/235 (68.09%), Query Frame = 0
Query:    1 MRDGRGIDIDLSIQVILNCATKVAGSCHGGSHTGTYEYASNNPVPFDTCQLYEAVDNECKPITKCKTCWNFQDKCEAVETYPNATVAEYGTVSGEADMMTEIFARGPIPCEIYAVPLHTYTGGVLDVPEIPSDTDHIVSVAGWGQTKDGVKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWTKLGPTPGPRPPFHSNGRGASMN----------LGAEVLRRGG 225
            +R G G+DI+LS+QVILNCAT  AGSCHGG   G +E+ + N +PFDTCQ Y+A D +C+P+  C+TCW F D C  V  YPNATVAE+G   GE  +M E+FARGPI C+I A PLH YTGGVLD P+    T+H+VS+ GWG T  G K+W+VRNSWGEYWGE GWFRL RGENQLL+ESNCAW VPG+WT +       PP H  G  AS            LGA  LR  G
Sbjct:   98 LRGGAGLDINLSVQVILNCATATAGSCHGGFAKGVFEWGTENAIPFDTCQQYKARDEKCEPLNVCRTCWTFDDTCIPVAPYPNATVAEFGDAVGERAIMKEVFARGPIACDIDADPLHEYTGGVLDWPQKSPGTNHVVSIVGWGVTDGGKKYWVVRNSWGEYWGEQGWFRLVRGENQLLIESNCAWGVPGAWTDVNSQTPVVPPPHPRGAAASAAPRGALTREAALGAVALRSAG 332          
BLAST of mRNA_A-nodosum_M_contig85.18.1 vs. uniprot
Match: A0A7S2V244_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V244_9STRA)

HSP 1 Score: 268 bits (686), Expect = 5.570e-87
Identity = 119/194 (61.34%), Postives = 147/194 (75.77%), Query Frame = 0
Query:    2 RDGRGIDIDLSIQVILNCATKVAGSCHGGSHTGTYEYASNNPVPFDTCQLYEAVDNECKPITKCKTCWNFQDKCEAVETYPNATVAEYGTVSGEADMMTEIFARGPIPCEIYAVPLHTYTGGVLDVPEIPSDTDHIVSVAGWGQTKDGVKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWTKL 195
            R  +G+DI+LS+QVILNCA  VAGSCHGG  +G YE+A NN VPFDTCQ Y+A+D EC P   C++C +F   C AV  YPN TV+EYG V GEA+MMTEI+ RGPI C+I +  LHTYTGG++D PE+  + +H V V GWG  ++G K W +RNSWGEYWGE GWFR+ RGENQL +ES C WAVPGSWT++
Sbjct:  101 RKAKGVDINLSVQVILNCAQNVAGSCHGGEPSGVYEWAHNNSVPFDTCQQYKAIDEECIPSNICRSCTSFSSDCYAVSQYPNVTVSEYGLVQGEANMMTEIYERGPIACDINSGQLHTYTGGIVDYPEV-LEPNHSVEVVGWG-FEEGKKIWYIRNSWGEYWGEQGWFRMVRGENQLGIESGCTWAVPGSWTEV 292          
BLAST of mRNA_A-nodosum_M_contig85.18.1 vs. uniprot
Match: A0A2R5GQG9_9STRA (Cathepsin Z n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQG9_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.000e-70
Identity = 105/216 (48.61%), Postives = 142/216 (65.74%), Query Frame = 0
Query:    2 RDGRGIDIDLSIQVILNCATKVAGSCHGGSHTGTYEYA-SNNPVPFDTCQLYEAVDN-------------ECKPITKCKTCWN--------FQDKCEAVETYPNATVAEYGTVSGEADMMTEIFARGPIPCEIYAVPLHTYTGGVLDVPEIPSDTDHIVSVAGWGQTKDGVKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWTKL 195
            R G+GIDI+L++Q +LNC +K+AGSC GGSH+G Y++   +  VPFDTC  YEA  +             EC  +  C+TCW         F+  C  VE +PNATVAEYG V+G  +M  EI+ RGPI C I ++PL  Y GG++D P     T+H+VS+ GW +TKDG +FWI RNSWGEY+G  G+F +K GENQL +ES+C+W VPG +T++
Sbjct:  114 RHGKGIDINLAVQYLLNCGSKIAGSCFGGSHSGAYQFIHESGHVPFDTCMQYEACSSKSNFTENCRVGNWECSAVNVCRTCWVELVKSPPFFKPACGPVEEFPNATVAEYGNVTGMLNMKAEIYKRGPIACSINSIPLGKYDGGIIDDPVSSKSTNHVVSLVGWDKTKDGTEFWIARNSWGEYFGHSGFFFIKTGENQLGIESHCSWGVPGPFTRV 329          
BLAST of mRNA_A-nodosum_M_contig85.18.1 vs. uniprot
Match: A0A0L0G2H7_9EUKA (Cathepsin X n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G2H7_9EUKA)

HSP 1 Score: 227 bits (579), Expect = 6.930e-70
Identity = 112/212 (52.83%), Postives = 136/212 (64.15%), Query Frame = 0
Query:    2 RDGRGIDIDLSIQVILNCATKVAGSCHGGSHTGTYEYASN--NPVPFDTCQLYEAVDNE------------CKPITKCKTCWNFQDK---CEAVETYPNATVAEYGTVSGEADMMTEIFARGPIPCEIYAVPLHTYTGGVLDVPEIPSDTDHIVSVAGWG-QTKDGVKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWTKL 195
            RD +G DI+L+IQ ILNC T VAGSCHGGSHTG Y +  N    +P+DTC  YEA   E            C     C+TC  F      C  V+ YPNAT+AEYG V GE +MM EI+ RGPI C I A P+  Y GG++D     S  +HI+SV GWG   K    +WIVRNSWGEYWGE G+FR+KRGENQL +ES+CAWA PG+WT++
Sbjct:  124 RDAKGSDINLAIQFILNCGTDVAGSCHGGSHTGAYNFVKNYAKHIPYDTCLQYEACSAESTEGTCKDRDFTCTGANTCRTCSTFTAYGGFCSEVDRYPNATIAEYGNVVGEYNMMAEIYRRGPIACGIDASPVDNYKGGIVDNTSAKS-INHIISVVGWGVDKKTDTPYWIVRNSWGEYWGEMGYFRVKRGENQLAIESSCAWATPGTWTEM 334          
BLAST of mRNA_A-nodosum_M_contig85.18.1 vs. uniprot
Match: A0A7S4GL91_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GL91_9EUGL)

HSP 1 Score: 226 bits (575), Expect = 1.060e-69
Identity = 111/211 (52.61%), Postives = 137/211 (64.93%), Query Frame = 0
Query:    2 RDGRGIDIDLSIQVILNCATKVAGSCHGGSHTGTYEYASNNP-VPFDTCQLYEAV------------DNECKPITKCKTCWNFQDK---CEAVETYPNATVAEYGTVSGEADMMTEIFARGPIPCEIYAVPLHTYTGGVLDVPEIPSDTDHIVSVAGWGQTKD-GVKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWTKL 195
            R  RG DI L+IQ ILNC T+ AGSCHGG H   Y++ +    VPF++CQLY A             + EC PI  CKTC  F+D    C A+E +PNATV E+G V G   M  EIF RGPI C I A  +  Y GG++DVP+   + DHIVSV GWG   D G ++WIVRNSWGEYWGE G+ R+  G+NQL LE++CAWAVPGSWT++
Sbjct:  101 RKARGNDITLAIQYILNCGTEAAGSCHGGDHLAVYDFITQTGFVPFESCQLYAACSAESKEGTCKYGNYECSPINTCKTCSTFKDNGGVCNAIEIFPNATVKEFGRVHGAKHMKAEIFHRGPIACGINANKILDYKGGLVDVPDAGREIDHIVSVTGWGYDADAGKQYWIVRNSWGEYWGEMGYIRVVMGDNQLGLEADCAWAVPGSWTEV 311          
BLAST of mRNA_A-nodosum_M_contig85.18.1 vs. uniprot
Match: A0A7S2RSF5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSF5_9STRA)

HSP 1 Score: 226 bits (576), Expect = 3.160e-69
Identity = 109/205 (53.17%), Postives = 140/205 (68.29%), Query Frame = 0
Query:    2 RDGRGIDIDLSIQVILNCATKVAGSCHGGSHTGTYEYASNNP-VPFDTCQLYEA------------VDNECKPITKCKTCWNFQDKCEAVETYPNATVAEYGTVSGEADMMTEIFARGPIPCEIYAVPLHTYTGGVLDVPEIPSDTDHIVSVAGWGQTKDGVKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWT 193
            R G+GIDI+LSIQ ILNC + VAGSC+GGS +GTY+   +   VP+DTCQ Y A            VD  C  I  C+TC  F   C A++ +PNA++AEYGT+SGE DM+ EI+ARGPI C I A P+H YTGG+ +     + T+HIVS+ GWG  ++G K+W VRNSWGEYWGE G FR++RGE+ L LE NCAWA   ++T
Sbjct:  141 RGGQGIDINLSIQWILNCGSDVAGSCYGGSGSGTYQLVKDTGYVPYDTCQPYLACSSDSAEGFCGSVDTTCSAINTCRTCSTFGVDCAAIDVFPNASIAEYGTISGEEDMLAEIYARGPIACSIDATPIHDYTGGIAE-DTADTSTNHIVSIYGWG-VENGTKYWHVRNSWGEYWGEAGHFRVRRGEDDLGLEKNCAWATVDAFT 343          
BLAST of mRNA_A-nodosum_M_contig85.18.1 vs. uniprot
Match: C1FFA0_MICCC (Cysteine endopeptidase n=3 Tax=Micromonas TaxID=38832 RepID=C1FFA0_MICCC)

HSP 1 Score: 221 bits (563), Expect = 3.630e-67
Identity = 105/209 (50.24%), Postives = 139/209 (66.51%), Query Frame = 0
Query:    5 RGIDIDLSIQVILNCATKVAGSCHGGSHTGTYEYASNNP-VPFDTCQLYEAVDNE---------------CKPITKCKTCWNFQDK---CEAVETYPNATVAEYGTVSGEADMMTEIFARGPIPCEIYAVPLHTYTGGVLDVP-EIPSDTDHIVSVAGWGQTKDGVKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWT 193
            +G D++L+IQ ILNC T+VAGSCHGGS TG Y++      VPF+TC +YEA   E               CKP   C+TC  F D    C A++++PNA++AEYG VSGE ++M E++ARGP+   I A  L  YTGG+LD P +   + +HIV++ GWG+TK G K+WIVRNSWGEYWGE G+FR+ RG+  L +E  C+WA P SWT
Sbjct:  140 KGPDVNLAIQFILNCGTEVAGSCHGGSATGAYQFVKEAGFVPFETCLVYEACSAESSEGSCAAGDVSRYECKPENTCRTCSTFSDMGGFCSALDSFPNASIAEYGEVSGEKEIMAEVYARGPVAAGIDANLLDEYTGGILDQPADYEYEINHIVAIVGWGETKKGEKYWIVRNSWGEYWGEMGFFRIVRGKKALGIEDECSWATPASWT 348          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig85.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH69_ECTSI1.210e-11765.02Cathepsin X n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LCL2_ECTSI3.260e-11676.21Cathepsin X n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5J6W1_9PHAE2.280e-11574.62Cathepsin X n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835YGR9_9STRA4.160e-9457.02Cathepsin X n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S2V244_9STRA5.570e-8761.34Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A2R5GQG9_9STRA1.000e-7048.61Cathepsin Z n=1 Tax=Hondaea fermentalgiana TaxID=2... [more]
A0A0L0G2H7_9EUKA6.930e-7052.83Cathepsin X n=1 Tax=Sphaeroforma arctica JP610 Tax... [more]
A0A7S4GL91_9EUGL1.060e-6952.61Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2RSF5_9STRA3.160e-6953.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
C1FFA0_MICCC3.630e-6750.24Cysteine endopeptidase n=3 Tax=Micromonas TaxID=38... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000668Peptidase C1A, papain C-terminalSMARTSM00645pept_c1coord: 2..188
e-value: 5.5E-8
score: 17.2
IPR000668Peptidase C1A, papain C-terminalPFAMPF00112Peptidase_C1coord: 8..182
e-value: 2.5E-31
score: 109.5
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 1..191
e-value: 4.6E-48
score: 166.2
NoneNo IPR availablePANTHERPTHR12411CYSTEINE PROTEASE FAMILY C1-RELATEDcoord: 10..175
IPR033157Cathepsin ZPANTHERPTHR12411:SF569SUBFAMILY NOT NAMEDcoord: 10..175
IPR025661Cysteine peptidase, asparagine active sitePROSITEPS00640THIOL_PROTEASE_ASNcoord: 152..171
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 7..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig85contigA-nodosum_M_contig85:392623..397571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig85.18.1mRNA_A-nodosum_M_contig85.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig85 377990..397769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig85.18.1 ID=prot_A-nodosum_M_contig85.18.1|Name=mRNA_A-nodosum_M_contig85.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=241bp
MRDGRGIDIDLSIQVILNCATKVAGSCHGGSHTGTYEYASNNPVPFDTCQ
LYEAVDNECKPITKCKTCWNFQDKCEAVETYPNATVAEYGTVSGEADMMT
EIFARGPIPCEIYAVPLHTYTGGVLDVPEIPSDTDHIVSVAGWGQTKDGV
KFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWTKLGPTPG
PRPPFHSNGRGASMNLGAEVLRRGGYGNGVQMGRGFGIEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000668Peptidase_C1A_C
IPR033157CTSZ
IPR025661Pept_asp_AS
IPR038765Papain-like_cys_pep_sf