prot_A-nodosum_M_contig849.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig849.4.1
Unique Nameprot_A-nodosum_M_contig849.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length67
Homology
BLAST of mRNA_A-nodosum_M_contig849.4.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.560e-19
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    2 EQCRADQCVYRKIVEGVVKLTLVVHVDGIVVSGEKEACEELHHTLNENFPTENLGELKWYLGCAVE 67
            EQC+AD CV+RK+V+ VV + +V++VD I+V+G  E CEEL  +LN+ FPT+NLGE +W+ GCA+E
Sbjct:   53 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIE 118          
BLAST of mRNA_A-nodosum_M_contig849.4.1 vs. uniprot
Match: A0A6H5L663_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L663_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 9.960e-19
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    2 EQCRADQCVYRKIVEGVVKLTLVVHVDGIVVSGEKEACEELHHTLNENFPTENLGELKWYLGCAVE 67
            E C+AD CV+RK+V+GVV + +V++VD I+V+G  E CEEL  +LN+ FPT+NLGE +W+ GCA+E
Sbjct:   45 EPCKADPCVFRKMVDGVVVMIVVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIE 110          
BLAST of mRNA_A-nodosum_M_contig849.4.1 vs. uniprot
Match: A0A6H5K5G1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G1_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.410e-18
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    2 EQCRADQCVYRKIVEGVVKLTLVVHVDGIVVSGEKEACEELHHTLNENFPTENLGELKWYLGCAVE 67
            EQC+AD CV+RK+V+ VV + +V++VD I+V+G  E CEEL  +LN+ FPT+NLGE +W+ GCA+E
Sbjct:  314 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIE 379          
BLAST of mRNA_A-nodosum_M_contig849.4.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 2.750e-18
Identity = 37/67 (55.22%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 MEQCRADQCVYRKIVEGVVKLTLVVHVDGIVVSGEKEACEELHHTLNENFPTENLGELKWYLGCAVE 67
            +EQC+AD CV+RK+V+ VV + +V++VD I+V+G  E CEEL  +LN+ FPT+NLGE +W+ GCA+E
Sbjct:  419 VEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIE 485          
BLAST of mRNA_A-nodosum_M_contig849.4.1 vs. uniprot
Match: A0A6H5JVD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD4_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.120e-18
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    2 EQCRADQCVYRKIVEGVVKLTLVVHVDGIVVSGEKEACEELHHTLNENFPTENLGELKWYLGCAVE 67
            EQC+AD CV+RK+V+ VV + +V++VD I+V+G  E CEEL  +LN+ FPT+NLGE +W+ GCA+E
Sbjct:  132 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIE 197          
BLAST of mRNA_A-nodosum_M_contig849.4.1 vs. uniprot
Match: A0A6H5KSR8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR8_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.120e-18
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    2 EQCRADQCVYRKIVEGVVKLTLVVHVDGIVVSGEKEACEELHHTLNENFPTENLGELKWYLGCAVE 67
            EQC+AD CV+RK+V+ VV + +V++VD I+V+G  E CEEL  +LN+ FPT+NLGE +W+ GCA+E
Sbjct:   76 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIE 141          
BLAST of mRNA_A-nodosum_M_contig849.4.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.430e-18
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    2 EQCRADQCVYRKIVEGVVKLTLVVHVDGIVVSGEKEACEELHHTLNENFPTENLGELKWYLGCAVE 67
            EQC+AD CV+RK+V+ VV + +V++VD I+V+G  E CEEL  +LN+ FPT+NLGE +W+ GCA+E
Sbjct:  196 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIE 261          
BLAST of mRNA_A-nodosum_M_contig849.4.1 vs. uniprot
Match: A0A6H5JUB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB8_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.700e-18
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    2 EQCRADQCVYRKIVEGVVKLTLVVHVDGIVVSGEKEACEELHHTLNENFPTENLGELKWYLGCAVE 67
            EQC+AD CV+RK+V+ VV + +V++VD I+V+G  E CEEL  +LN+ FPT+NLGE +W+ GCA+E
Sbjct:  418 EQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIE 483          
BLAST of mRNA_A-nodosum_M_contig849.4.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.750e-18
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    2 EQCRADQCVYRKIVEGVVKLTLVVHVDGIVVSGEKEACEELHHTLNENFPTENLGELKWYLGCAVE 67
            EQC+AD CV+RK+V+ VV + +V++VD I+V+G  E CEEL  +LN+ FPT+NLGE +W+ GCA+E
Sbjct:  544 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIE 609          
BLAST of mRNA_A-nodosum_M_contig849.4.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.760e-18
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    2 EQCRADQCVYRKIVEGVVKLTLVVHVDGIVVSGEKEACEELHHTLNENFPTENLGELKWYLGCAVE 67
            EQC+AD CV+RK+V+ VV + +V++VD I+V+G  E CEEL  +LN+ FPT+NLGE +W+ GCA+E
Sbjct:  500 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIE 565          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig849.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRS6_9PHAE2.560e-1956.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L663_9PHAE9.960e-1956.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5G1_9PHAE2.410e-1856.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K274_9PHAE2.750e-1855.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVD4_9PHAE3.120e-1856.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSR8_9PHAE3.120e-1856.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KTL3_9PHAE3.430e-1856.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JUB8_9PHAE3.700e-1856.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K164_9PHAE3.750e-1856.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQN6_9PHAE3.760e-1856.06Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig849contigA-nodosum_M_contig849:92261..92461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig849.4.1mRNA_A-nodosum_M_contig849.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig849 92261..92464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig849.4.1 ID=prot_A-nodosum_M_contig849.4.1|Name=mRNA_A-nodosum_M_contig849.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=67bp
MEQCRADQCVYRKIVEGVVKLTLVVHVDGIVVSGEKEACEELHHTLNENF
PTENLGELKWYLGCAVE
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