prot_A-nodosum_M_contig8472.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8472.1.1
Unique Nameprot_A-nodosum_M_contig8472.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length160
Homology
BLAST of mRNA_A-nodosum_M_contig8472.1.1 vs. uniprot
Match: D8LN92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN92_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 9.600e-39
Identity = 67/113 (59.29%), Postives = 79/113 (69.91%), Query Frame = 0
Query:    5 TPAPTIPP-IPMEPCEAGAGGGRNGSA--CVDLASPEDIAAGVGYYYEEGCEGLGCNIFGENDCRQCLFDRTAYANSGLEDMDGLEDCPSCVPIVYKLRPDDSQCIWPLTPAP 114
            TPAPT  P I MEPCE G  G   G +  CVD++SP D+A G+G YYE  CEGLGC+I G  DCRQC+FD TAYA SG    D L +CP CVP+ Y+LRPD S+C WP TP+P
Sbjct:  137 TPAPTAAPVIAMEPCEVGVAGDTTGDSTLCVDISSPVDLANGIGTYYEANCEGLGCDIAGNEDCRQCIFDETAYAASG--GTDALVECPCCVPVSYQLRPDSSECTWPATPSP 247          
BLAST of mRNA_A-nodosum_M_contig8472.1.1 vs. uniprot
Match: D8LDL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL0_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.060e-38
Identity = 75/141 (53.19%), Postives = 90/141 (63.83%), Query Frame = 0
Query:   11 PPIPMEPCEAGAGGGRNGSACVDLASPEDIAAGVGYYYEEGCEGLGCNIFGENDCRQCLFDRTAYANSG--LEDMDGLEDCPSCVPIVYKLRPDDSQCIWPLTPAPTLAPTLESEALGNDAQKRNG---GGGGLVISYLVG 146
            P IPMEPCE  AGG  +   CVD+AS  D   G+G YYE GC+G+GC+I G  DCRQC+FD  AYA SG  LE    L  CP CVPI YKLRP+ S+C+WP TP+PT APT   E    +   R G   GG  +VI+ +VG
Sbjct:  175 PTIPMEPCETSAGGNSSALLCVDIASAVDWDDGIGTYYESGCQGVGCDIAGHVDCRQCVFDSEAYATSGGNLE----LAACPCCVPITYKLRPEGSECVWPPTPSPTAAPTTAEEWSERNGAARPGMAFGGPLVVIAAVVG 311          
BLAST of mRNA_A-nodosum_M_contig8472.1.1 vs. uniprot
Match: A0A6H5KW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW91_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.180e-34
Identity = 61/104 (58.65%), Postives = 72/104 (69.23%), Query Frame = 0
Query:   13 IPMEPCEAGAGGGRNGSA--CVDLASPEDIAAGVGYYYEEGCEGLGCNIFGENDCRQCLFDRTAYANSGLEDMDGLEDCPSCVPIVYKLRPDDSQCIWPLTPAP 114
            I MEPCE G  G   G +  CVD+AS  D+A G+G YYE  CEGLGC+I G  DCRQC+FD TAYA SG    D L +CP CVP++Y+LRPD S+C WP TP P
Sbjct:  294 IAMEPCEVGVAGDTTGDSTLCVDIASTLDLANGIGTYYEANCEGLGCDIAGNVDCRQCIFDETAYAASG--GTDALVECPCCVPVIYQLRPDSSECTWPATPTP 395          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8472.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LN92_ECTSI9.600e-3959.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDL0_ECTSI1.060e-3853.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW91_9PHAE1.180e-3458.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8472contigA-nodosum_M_contig8472:6598..8534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8472.1.1mRNA_A-nodosum_M_contig8472.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8472 6106..9265 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8472.1.1 ID=prot_A-nodosum_M_contig8472.1.1|Name=mRNA_A-nodosum_M_contig8472.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=160bp
MPVGTPAPTIPPIPMEPCEAGAGGGRNGSACVDLASPEDIAAGVGYYYEE
GCEGLGCNIFGENDCRQCLFDRTAYANSGLEDMDGLEDCPSCVPIVYKLR
PDDSQCIWPLTPAPTLAPTLESEALGNDAQKRNGGGGGLVISYLVGIASS
VVVTFWGFS*
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