prot_A-nodosum_M_contig847.16.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig847.16.1
Unique Nameprot_A-nodosum_M_contig847.16.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length253
Homology
BLAST of mRNA_A-nodosum_M_contig847.16.1 vs. uniprot
Match: A0A6H5KV87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV87_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 2.120e-89
Identity = 147/250 (58.80%), Postives = 189/250 (75.60%), Query Frame = 0
Query:    5 QPRHALLATLASGA-LAFLWWRSSRSQSREEEEEDWEPIDRDHVVKFFQIINAQSQAQAASFNQQVAQYRGKIEEQQLTDLGINHFEEQLFKNQKQILAGMGISLEDMEDATAYYEQEGDPLVKEQVTMLKNLYLAVSKSKS-VDMPGLPDDLTAEKMVTVVSAFFKASNDCIREVVEDLIAQARFCPTDPATAREMSVLLQQRNGPATDAAIKRFNLDSNTIGPAMEKFQDHAEIQNAIRAGAQQQREM 252
            QPR AL   +A GA +A++ WR + S   +EE E+WEP+DR HVVKFFQI+N Q      SFNQQ+AQYRGK+ EQQLTDL + HFE+ L K Q Q+  GMGISLEDMEDA+ YYE++GDP VKEQ+  LK+LYL VS   +  + P LPDDLT EKMVTVV+AFFKASN+ +  VV++L+A+     + P TA +MS+++Q+RNGPATD AIKRFNL+S TIGPAMEKFQ+H EI+ AI  G+++Q ++
Sbjct:  134 QPRTALATMVAFGAGVAYILWRRAGSMG-DEEMEEWEPVDRSHVVKFFQILNQQLHQSIMSFNQQIAQYRGKVPEQQLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDPQVKEQLRHLKHLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVVESVVQELLAKGEDI-SSPETAMKMSMIIQERNGPATDEAIKRFNLNSTTIGPAMEKFQEHPEIKTAIMVGSEEQHQI 381          
BLAST of mRNA_A-nodosum_M_contig847.16.1 vs. uniprot
Match: D7FYT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT1_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 4.950e-84
Identity = 134/221 (60.63%), Postives = 171/221 (77.38%), Query Frame = 0
Query:   33 EEEEEDWEPIDRDHVVKFFQIINAQSQAQAASFNQQVAQYRGKIEEQQLTDLGINHFEEQLFKNQKQILAGMGISLEDMEDATAYYEQEGDPLVKEQVTMLKNLYLAVSKSKS-VDMPGLPDDLTAEKMVTVVSAFFKASNDCIREVVEDLIAQARFCPTDPATAREMSVLLQQRNGPATDAAIKRFNLDSNTIGPAMEKFQDHAEIQNAIRAGAQQQREM 252
            +EE E+WEP+DRDHVVKFFQI+N QS     SFNQQ+ QYRGK+ EQ LTDL + HFE+ L K Q QI  GMGISLEDMEDA+ YYE++GD  VKEQ+  LKNLYL VS   +  + P LPDDLT EKMVTVV+AFFKASN+ I  VV++L+A+     T+P TA +MS+ +Q+++GPATD AIKRFNL+S TIGPAM+KF++H EI+ AI  G+++Q ++
Sbjct:    3 DEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIVQYRGKVPEQHLTDLAVGHFEDSLAKTQAQISVGMGISLEDMEDASKYYEEKGDQQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGGDV-TNPETAMKMSMAIQEKSGPATDEAIKRFNLNSTTIGPAMDKFREHEEIKTAIMVGSEEQHQI 222          
BLAST of mRNA_A-nodosum_M_contig847.16.1 vs. uniprot
Match: A0A835ZBD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD1_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 9.590e-19
Identity = 65/239 (27.20%), Postives = 118/239 (49.37%), Query Frame = 0
Query:   14 LASGALAFLWWRSS---RSQSREEEEEDWEPIDRDHVVKFFQIINAQSQAQAASFNQQVAQYRGKIEEQQLTDLGINHFEEQLFKNQKQILAGMGISLEDMEDATAYYEQEGDPLVKEQVTMLKNLYLAVSKSKSVDMPGLPDDLTAEKMVTVVSAFFKASNDCIREVVEDLIAQARFCPTDPATAREMSVLLQQRNGPATDAAIKRFNLDSNTIGPAMEKFQDHAEIQNAIRAGAQQQ 249
            + +   A++ W +    R+  +EE  E+   + +D V +FF +I         +   Q+AQYRG++  +QL  + +  FE+QL + Q  +L   G + E++E AT YY  +GD  V+     L+ +Y AVS   +     LP  LT + +   ++ +F  S   +R +VED+  + +           M    ++++  ATDA +  + + S  +GPA+EKF+   ++     A  Q+Q
Sbjct:   18 VTTSTYAYVRWSAGAKRRAPPKEEGVEELPRVPKDKVAEFFDVIIENMTKAIMALEAQLAQYRGQVPREQLAQVMLQQFEDQLQQQQDALLKKWGYTEEELEAATEYYGGDGD--VRHGAQRLRRMYEAVSGQSAGQ---LPRGLTEDTLCAALNDYFDVSIALMRRLVEDVTDRGQSVDNPLMMQEIMMRFTREQDAVATDA-LAAYGMHSEMVGPAIEKFKGSDKVMGTFAACQQRQ 250          
BLAST of mRNA_A-nodosum_M_contig847.16.1 vs. uniprot
Match: A0A6V1QE83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QE83_HETAK)

HSP 1 Score: 62.8 bits (151), Expect = 5.670e-8
Identity = 52/205 (25.37%), Postives = 97/205 (47.32%), Query Frame = 0
Query:   42 IDRDHVVKFFQIINAQSQAQAASFNQQVAQYRGKIE-------EQQLTDLGINHFEEQLFKNQKQILAGMGISLEDMEDATAYYEQEGDPLVKEQVTMLKNLYLAVS-KSKSVDMPGLPDDLTAEKMVTVVSAFFKASNDCIREVVEDLIAQARFCPTDPATAREMSVLLQQRNGPATDAAIKRFNLDSNTIGPAMEKFQDHAEI 238
            I +  V++ F  IN   QA+     QQ+ Q   +++       E+++       FE  L K ++Q+L       +++E+AT Y+E++GD  VK  V  L+ +Y A+S  +K  + P    DLT EK + ++  +F + +  +  +VE+  A+    P  P    EM  L+  +        ++   LD+      ++KF +  E+
Sbjct:   49 ITKAQVLEIFTTINQNMQAKVRELTQQLDQISQQMKAAGQALPEKEIHAYLSQEFESHLKKVEEQVLEKYKTDEDELEEATEYFEEQGDEEVKAVVRQLEVMYEAMSGTAKKKEAPA---DLTREKFLALLPVYFGSMSKALAGLVEEA-ARKGITPQSP----EMQQLVATQLDARALKTMQEQGLDNEVFNAGLQKFHEDPEV 245          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig847.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KV87_9PHAE2.120e-8958.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYT1_ECTSI4.950e-8460.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZBD1_9STRA9.590e-1927.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1QE83_HETAK5.670e-825.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig847contigA-nodosum_M_contig847:212112..220531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig847.16.1mRNA_A-nodosum_M_contig847.16.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig847 212112..220531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig847.16.1 ID=prot_A-nodosum_M_contig847.16.1|Name=mRNA_A-nodosum_M_contig847.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=253bp
MDVIQPRHALLATLASGALAFLWWRSSRSQSREEEEEDWEPIDRDHVVKF
FQIINAQSQAQAASFNQQVAQYRGKIEEQQLTDLGINHFEEQLFKNQKQI
LAGMGISLEDMEDATAYYEQEGDPLVKEQVTMLKNLYLAVSKSKSVDMPG
LPDDLTAEKMVTVVSAFFKASNDCIREVVEDLIAQARFCPTDPATAREMS
VLLQQRNGPATDAAIKRFNLDSNTIGPAMEKFQDHAEIQNAIRAGAQQQR
EM*
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