prot_A-nodosum_M_contig845.3.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig845.3.3
Unique Nameprot_A-nodosum_M_contig845.3.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length435
Homology
BLAST of mRNA_A-nodosum_M_contig845.3.3 vs. uniprot
Match: D7FP11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP11_ECTSI)

HSP 1 Score: 412 bits (1058), Expect = 3.940e-138
Identity = 219/414 (52.90%), Postives = 270/414 (65.22%), Query Frame = 0
Query:   23 ILWTGLWTFLDRHAPGGTGVWKEVALALAGAVVMIWTRTLFSNAGMDSLDYEGTLVEMGSLLAQGRLDWRNKAAFFARSVLAMAGAILFWDGVFTLCDQYVWENTLAYNLCCATVGGAGMLWAMTSEDAERETMDDGIDCPLRPVGVRVARAGNLEGAKLTVTRLSQERRVMLYAKAIFCNVCSVIFWKGVEEVIERVGPDTGWTGVVFFVVGIVVLWLTQRLSLNSGLEDDREFSVVNGASEPAVDVIRTEQMPPFASYPFFGHRARSTFVAYFKQVVLNMHYKCAGSNKALDT-TAFGDRDIRDTESEAGETVRRLGYCCPDAFFWPCALGMVDVQSENCSRWVMTAAELTGVVFAWTGIEWYVWDGDYIKDTWLRDVAYIGAGLTILIATGTFANLAGTISPMSILKQARE 435
            +LWTG+WT LDRH PGGTG+WKE+ LA+AGA +M+WTRT FSNAGMDSLD EG+L EMGSLL QGRL WR++A F+ARS+LA+ G+ILFWDGV+ LCD++ WE TL YNL CA++GGAGM+W MTSED +     D I          +A A N  G + +  RL    R  LYAKA+FCNVC V+FWKGVEE+IE  GP+  WTG+VFFV+GI +L  T RLS+NSGLED    +V   A  PA   I T      +S P     + S  +     VV+N    C G ++ +   T+FG  ++R      G   RR G  C            V+V      RWV TAAELTGVVFAWTGIEWYVW+GDYI D+ LRD+ YI  GL IL+ TGTF NLAGTISP++ LKQ  +
Sbjct:    1 MLWTGVWTLLDRHVPGGTGLWKELGLAVAGAWIMVWTRTFFSNAGMDSLDQEGSLSEMGSLLVQGRLRWRDEAKFYARSLLAIVGSILFWDGVYDLCDEHTWEGTLTYNLVCASLGGAGMVWVMTSEDEDERMRGDDIG---GGPAAMMASAANRSGGRSS--RLGPGNRGRLYAKALFCNVCGVVFWKGVEEIIEDNGPNKDWTGLVFFVIGISILIATDRLSMNSGLEDGLPPAVDIQAG-PAACTIETAAWDASSSNPDLRAPSSSPLLL---DVVVN-DLSCPGCSRLVAAPTSFGGGNVRSPCGGEGAGSRRRGRGC------------VEVP-----RWVTTAAELTGVVFAWTGIEWYVWEGDYIPDSALRDLGYIAVGLGILVGTGTFFNLAGTISPVAALKQVHQ 387          
BLAST of mRNA_A-nodosum_M_contig845.3.3 vs. uniprot
Match: A0A835Z909_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z909_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.300e-10
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0
Query:  357 DVQSENCSRWVMTAAELTGVVFAWTGIEWYVWDGDYIKDTWLRDVAYIGAGLTILIATGTFANLAGTISPMSI 429
            D       + ++ A+EL  V   WTG EW++WDG    +T  RD  Y   G  +L+ TGTF +LAGT+SPM +
Sbjct:   46 DKVQSAMGQTLLNASELIAVCLIWTGCEWFIWDGFLFHETCTRDSLYALVGFAVLLCTGTFVSLAGTVSPMGV 118          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig845.3.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP11_ECTSI3.940e-13852.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z909_9STRA1.300e-1041.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig845contigA-nodosum_M_contig845:71402..102025 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig845.3.3mRNA_A-nodosum_M_contig845.3.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig845 71402..102026 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig845.3.3 ID=prot_A-nodosum_M_contig845.3.3|Name=mRNA_A-nodosum_M_contig845.3.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=435bp
MRISWGTWMDVLRGGLSWPGVVILWTGLWTFLDRHAPGGTGVWKEVALAL
AGAVVMIWTRTLFSNAGMDSLDYEGTLVEMGSLLAQGRLDWRNKAAFFAR
SVLAMAGAILFWDGVFTLCDQYVWENTLAYNLCCATVGGAGMLWAMTSED
AERETMDDGIDCPLRPVGVRVARAGNLEGAKLTVTRLSQERRVMLYAKAI
FCNVCSVIFWKGVEEVIERVGPDTGWTGVVFFVVGIVVLWLTQRLSLNSG
LEDDREFSVVNGASEPAVDVIRTEQMPPFASYPFFGHRARSTFVAYFKQV
VLNMHYKCAGSNKALDTTAFGDRDIRDTESEAGETVRRLGYCCPDAFFWP
CALGMVDVQSENCSRWVMTAAELTGVVFAWTGIEWYVWDGDYIKDTWLRD
VAYIGAGLTILIATGTFANLAGTISPMSILKQARE
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